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The map label for this gene is 117918702

Identifier: 117918702

GI number: 117918702

Start: 276543

End: 277139

Strand: Reverse

Name: 117918702

Synonym: Shewana3_0245

Alternate gene names: NA

Gene position: 277139-276543 (Counterclockwise)

Preceding gene: 117918705

Following gene: 117918701

Centisome position: 5.57

GC content: 51.42

Gene sequence:

>597_bases
ATGTCCTCAAATATGCAGCAAAACATCAAAGTCTGGGATCCCTTGATCCGTATCTTTCACTGGTCATTGGTGGGCTTTTT
TACCTTAGCCTACCTCACCGAAGGTGAAGACGAATGGATGAATATCCATAGTTACGCCGGCTACAGCATCTTAACCCTGC
TGGTATTTCGCCTGTTATGGGGCGTTATTGGCACTCACCATGCGCGTTTTATCAACTTTGTTACCCGTCCGAGCATCGCA
TGGGCATACCTGAAGGAACTGTTCACGGGCAAGGCTAAGGATTACATCGGCCACAATCCCGCAGGCGCACTGATGATAGT
CGCCCTGATCCTCAGCATAGGGTTCACTGGCTTCTCCGGCATGGCGCTTTATGCCACCGATGGCCAAGGTCCACTGGCCA
CAAGCTTTTTCGCCACTTGGCCCGAGGGCGCCCTGAAGGAAGTGCATGAGTTTTTCGCCAACTTCAGCCTGCTTCTTATC
GTCACCCATGTCGGCGGCGTGATCGTCAGCAGCCTGCTGCATAAGGAAAACCTCGTCAAAGCCATGCTGACAGGTAAAAA
GCAGCGCCAACTGATCCAACAAGATGAACATCAATAA

Upstream 100 bases:

>100_bases
GCTCATCAGAACACCGGGCAAGTTCACCCCGCAAAATTTAAGCGCCGTTTAAGTTTGGCTTTAGTAGCCTGCAAGCACAC
CACCTTAGGAGCAACAGATC

Downstream 100 bases:

>100_bases
TCGTCACAATCCGACCGTTCAAAGGAGTCAGACATGAACAACAACCTGAATAAAAGCCTGATGGGACTGGCGCTCACTGT
GGTACTGCTCAGCAGTGTTA

Product: cytochrome B561

Products: NA

Alternate protein names: Cytochrome; Hydrogenase Cytochrome B-Type Subunit; B-Type Cytochrome; Nickel-Dependent Hydrogenase B-Type Cytochrome Subunit; Cytochrome B/B6 Domain; Dihem Cytochrome C; Nickel-Dependent Hydrogenase Cytochrome B Subunit; Hydrogenase Cytochrome B-Type Subunit Protein; Nickel-Dependent Hydrogenase; Nickel-Dependent Hydrogenase Cytochrome B-Type Subunit; Cytochrome B Oxidoreductase Protein; Integral Membrane Protein; Cytochrome C Family Protein; Ni/Fe-Hydrogenase 1 B-Type Cytochrome Subunit

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSSNMQQNIKVWDPLIRIFHWSLVGFFTLAYLTEGEDEWMNIHSYAGYSILTLLVFRLLWGVIGTHHARFINFVTRPSIA
WAYLKELFTGKAKDYIGHNPAGALMIVALILSIGFTGFSGMALYATDGQGPLATSFFATWPEGALKEVHEFFANFSLLLI
VTHVGGVIVSSLLHKENLVKAMLTGKKQRQLIQQDEHQ

Sequences:

>Translated_198_residues
MSSNMQQNIKVWDPLIRIFHWSLVGFFTLAYLTEGEDEWMNIHSYAGYSILTLLVFRLLWGVIGTHHARFINFVTRPSIA
WAYLKELFTGKAKDYIGHNPAGALMIVALILSIGFTGFSGMALYATDGQGPLATSFFATWPEGALKEVHEFFANFSLLLI
VTHVGGVIVSSLLHKENLVKAMLTGKKQRQLIQQDEHQ
>Mature_197_residues
SSNMQQNIKVWDPLIRIFHWSLVGFFTLAYLTEGEDEWMNIHSYAGYSILTLLVFRLLWGVIGTHHARFINFVTRPSIAW
AYLKELFTGKAKDYIGHNPAGALMIVALILSIGFTGFSGMALYATDGQGPLATSFFATWPEGALKEVHEFFANFSLLLIV
THVGGVIVSSLLHKENLVKAMLTGKKQRQLIQQDEHQ

Specific function: Unknown

COG id: COG3658

COG function: function code C; Cytochrome b

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22259; Mature: 22128

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNMQQNIKVWDPLIRIFHWSLVGFFTLAYLTEGEDEWMNIHSYAGYSILTLLVFRLLW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GVIGTHHARFINFVTRPSIAWAYLKELFTGKAKDYIGHNPAGALMIVALILSIGFTGFSG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
MALYATDGQGPLATSFFATWPEGALKEVHEFFANFSLLLIVTHVGGVIVSSLLHKENLVK
EEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLTGKKQRQLIQQDEHQ
HHHCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SSNMQQNIKVWDPLIRIFHWSLVGFFTLAYLTEGEDEWMNIHSYAGYSILTLLVFRLLW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GVIGTHHARFINFVTRPSIAWAYLKELFTGKAKDYIGHNPAGALMIVALILSIGFTGFSG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCC
MALYATDGQGPLATSFFATWPEGALKEVHEFFANFSLLLIVTHVGGVIVSSLLHKENLVK
EEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLTGKKQRQLIQQDEHQ
HHHCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA