| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117918543
Identifier: 117918543
GI number: 117918543
Start: 98109
End: 98372
Strand: Reverse
Name: 117918543
Synonym: Shewana3_0084
Alternate gene names: NA
Gene position: 98372-98109 (Counterclockwise)
Preceding gene: 117918544
Following gene: 117918535
Centisome position: 1.98
GC content: 49.24
Gene sequence:
>264_bases ATGTCAGAAAAAGCGCCAATAGAAGTCGTTGTTGAGCATCAACAGGATAAACAACGCTTTGTGATCCCCGTTGACGGGCA TGAAGCCGTGCTGGAATACCGACTCAATGGCCAGCACATCGACTTTAACCGAACCTTTGTGCCCGACGAGCTACGCGGCA AAGGCCTTGCCGAACGTTTAGTTCGCCATGGCCTAAAGTGGGCCAAAGCCCAAGATTTTGAGATAGCAGCCAGCTGTTGG TATGTGCAGAAGTTTTTGAAATAA
Upstream 100 bases:
>100_bases CGGAATTACTCACCATTCTTAAACAACACGAGCAAGCTTAAGCTACCGAGTCTATGGCAACATTGCCATAACACTTTAGG CCATATCAGAGGGAGGCTGT
Downstream 100 bases:
>100_bases CAGGCTTCGCAACAGGTGTGCTAAATCCAATAGACTGGATAGTGGCGTTTGGGATCGGTGGAGAGATTATTCACGACCAG CGCCACCAGCAACAGCAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Acetyltransferase-Like
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MSEKAPIEVVVEHQQDKQRFVIPVDGHEAVLEYRLNGQHIDFNRTFVPDELRGKGLAERLVRHGLKWAKAQDFEIAASCW YVQKFLK
Sequences:
>Translated_87_residues MSEKAPIEVVVEHQQDKQRFVIPVDGHEAVLEYRLNGQHIDFNRTFVPDELRGKGLAERLVRHGLKWAKAQDFEIAASCW YVQKFLK >Mature_86_residues SEKAPIEVVVEHQQDKQRFVIPVDGHEAVLEYRLNGQHIDFNRTFVPDELRGKGLAERLVRHGLKWAKAQDFEIAASCWY VQKFLK
Specific function: Unknown
COG id: COG2388
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10162; Mature: 10031
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKAPIEVVVEHQQDKQRFVIPVDGHEAVLEYRLNGQHIDFNRTFVPDELRGKGLAERL CCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCCEECCCCCCCCCCCCCCCHHHHH VRHGLKWAKAQDFEIAASCWYVQKFLK HHCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SEKAPIEVVVEHQQDKQRFVIPVDGHEAVLEYRLNGQHIDFNRTFVPDELRGKGLAERL CCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCCEECCCCCCCCCCCCCCCHHHHH VRHGLKWAKAQDFEIAASCWYVQKFLK HHCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA