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The map label for this gene is yuaR [C]

Identifier: 117918535

GI number: 117918535

Start: 88057

End: 89676

Strand: Reverse

Name: yuaR [C]

Synonym: Shewana3_0076

Alternate gene names: 117918535

Gene position: 89676-88057 (Counterclockwise)

Preceding gene: 117918543

Following gene: 117918534

Centisome position: 1.8

GC content: 53.4

Gene sequence:

>1620_bases
ATGATAGATAGCATGATCCACAGGAAGTCCCATAATGCCAGCGCTGACGTGGCAATGAAGCGCGTTGATACTCGCCAGCA
CTCGGGCAAGTTAAGCAAAAGCATCATCAGTTTGAGTGCGCTGATGCTCGCCATGGGTAGCGCCACGGCTTGGGCGAGCG
ACAACTCAGTAAAGCCCACTGAATCCGCCAACACCTGTTATGTGGAGGGCGTGTCGGACCGCTTAAATTGCGGCTTTGTC
ACTGTGCCCGAAAACCCTAATAAGCCCGATGGCAAACAGATCCAAGTGCATTATGTGGTCTTGCCCGCGGTGAAAAACGT
CAACCACGAAGAGGCTTTACTGGCGATCGCCGGCGGCCCAGGTCAATCGGCCATAGATAACGCGGCAGGCTTCGATAGCA
TGCTGAACAAAGTGCGCCAGCAGCGCGATATTCTGCTAATCGATCAACGCGGAACGGGGCGCTCCAATGTGCTCAATTGT
GACGCAGGCCCACAATCGCCACTGTCCTTCGACGATGATAATGTCGATACCTTGGCCGAAGCGCAAAAATGCCGCGATCA
ATTCCCCGATACTGATGTCACCCAATATGGCAGCCTCAATGCGGTGCAAGACTTCGAAGCCGTACGCGCCCAGTTAGGCT
ACAAAAAACTGCACCTCTACGGTATCTCCTACGGCACACGTATGGCACAGCTCTATATGCGCTTATATCCCGAGCACTTA
GCCACAGTCACCATAGACGGTATTGTGCCCATGCAGCAGAGCGTATTGGAGATTGGCTCGGCGATTGAACGTGGCTTTGA
CTTGCTGTTTAAAGACTGCCAAGACACAGCCGCCTGCCATGCCGAGTTTCCTGAGCTCAAGGCCGAGTTTGACCAAGTAG
TCGCTAAACTCAGCCAAGGGCCAGTGATGGAGCAAGTGCACGACCCAGTGACGGGAGAAAAGACCCTACTCACTATGACG
CGCTCAAAGTTTTACGGCGCGATCCGCATGGCGCTGTATCAAACCAATGTACGCGCCTTAGTGCCCCATGCGATTCATCA
GGCCGCTAAGGGTAACTACCAACCATTACTCGGGTTATTTGCCTTAACTACGGATAATGCGGGTATGGCAATGGGCATGC
ACGCCTCAGTCGTCTGCGGTGAAGACATACATCGCATCACCCCTGCGATGCGCGAACAGGCCAAAACCTCCTATGTTGGC
AAAACCATGCTCGAAAGCTTAGAAGCATCGTGCTCTGTGTGGAAGGTGCCGCCAGTCGATGCCAACTTTAGCGAGCCTAT
CAAGAGTGATATCCCCACCCTGTTGCTATCGGGCGAAATTGACCCAGCAACCCCACCGAGCTGGGGAGAACTGGCGATGG
AGAAACTCACCAACGCCAAACACTTTGTCGCACCTTATGCGACCCATGGTGTAGCCTATCAGTCCTGCGCCAATAACTTA
GTCGCCGAGTTAGTGCGTACTGGTTCGGTCAATGATCTCGATGGTGAATGTTTGAAGAAGGATGTGCGCCGTAGCTTCTA
TTTAAACGCCAGCTCGGTTGAGCCACTCGCAACCGAAGATGCAACCCACTCTTCCAAAGATAAGCCCAAGGATAAGCCCA
GCACTGGAGCCAAGGAGTAA

Upstream 100 bases:

>100_bases
TCTAACATTAGTCTTTACACACTGTATTAATACATTGATACACCGATACACTGTATTTAAAGTAACACACTCATCCTGAA
ATGCAAAAAGGAAAGCGCTC

Downstream 100 bases:

>100_bases
GTCATGATCAAAGTATCCCATCTTTCTAAGCGCATCGGCGAAGTGCAGGCCTTAAACGATTTGAGCTTCGTGGCCGAAAA
CGGCCAGATCACCGGCCTAC

Product: TAP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 539

Protein sequence:

>539_residues
MIDSMIHRKSHNASADVAMKRVDTRQHSGKLSKSIISLSALMLAMGSATAWASDNSVKPTESANTCYVEGVSDRLNCGFV
TVPENPNKPDGKQIQVHYVVLPAVKNVNHEEALLAIAGGPGQSAIDNAAGFDSMLNKVRQQRDILLIDQRGTGRSNVLNC
DAGPQSPLSFDDDNVDTLAEAQKCRDQFPDTDVTQYGSLNAVQDFEAVRAQLGYKKLHLYGISYGTRMAQLYMRLYPEHL
ATVTIDGIVPMQQSVLEIGSAIERGFDLLFKDCQDTAACHAEFPELKAEFDQVVAKLSQGPVMEQVHDPVTGEKTLLTMT
RSKFYGAIRMALYQTNVRALVPHAIHQAAKGNYQPLLGLFALTTDNAGMAMGMHASVVCGEDIHRITPAMREQAKTSYVG
KTMLESLEASCSVWKVPPVDANFSEPIKSDIPTLLLSGEIDPATPPSWGELAMEKLTNAKHFVAPYATHGVAYQSCANNL
VAELVRTGSVNDLDGECLKKDVRRSFYLNASSVEPLATEDATHSSKDKPKDKPSTGAKE

Sequences:

>Translated_539_residues
MIDSMIHRKSHNASADVAMKRVDTRQHSGKLSKSIISLSALMLAMGSATAWASDNSVKPTESANTCYVEGVSDRLNCGFV
TVPENPNKPDGKQIQVHYVVLPAVKNVNHEEALLAIAGGPGQSAIDNAAGFDSMLNKVRQQRDILLIDQRGTGRSNVLNC
DAGPQSPLSFDDDNVDTLAEAQKCRDQFPDTDVTQYGSLNAVQDFEAVRAQLGYKKLHLYGISYGTRMAQLYMRLYPEHL
ATVTIDGIVPMQQSVLEIGSAIERGFDLLFKDCQDTAACHAEFPELKAEFDQVVAKLSQGPVMEQVHDPVTGEKTLLTMT
RSKFYGAIRMALYQTNVRALVPHAIHQAAKGNYQPLLGLFALTTDNAGMAMGMHASVVCGEDIHRITPAMREQAKTSYVG
KTMLESLEASCSVWKVPPVDANFSEPIKSDIPTLLLSGEIDPATPPSWGELAMEKLTNAKHFVAPYATHGVAYQSCANNL
VAELVRTGSVNDLDGECLKKDVRRSFYLNASSVEPLATEDATHSSKDKPKDKPSTGAKE
>Mature_539_residues
MIDSMIHRKSHNASADVAMKRVDTRQHSGKLSKSIISLSALMLAMGSATAWASDNSVKPTESANTCYVEGVSDRLNCGFV
TVPENPNKPDGKQIQVHYVVLPAVKNVNHEEALLAIAGGPGQSAIDNAAGFDSMLNKVRQQRDILLIDQRGTGRSNVLNC
DAGPQSPLSFDDDNVDTLAEAQKCRDQFPDTDVTQYGSLNAVQDFEAVRAQLGYKKLHLYGISYGTRMAQLYMRLYPEHL
ATVTIDGIVPMQQSVLEIGSAIERGFDLLFKDCQDTAACHAEFPELKAEFDQVVAKLSQGPVMEQVHDPVTGEKTLLTMT
RSKFYGAIRMALYQTNVRALVPHAIHQAAKGNYQPLLGLFALTTDNAGMAMGMHASVVCGEDIHRITPAMREQAKTSYVG
KTMLESLEASCSVWKVPPVDANFSEPIKSDIPTLLLSGEIDPATPPSWGELAMEKLTNAKHFVAPYATHGVAYQSCANNL
VAELVRTGSVNDLDGECLKKDVRRSFYLNASSVEPLATEDATHSSKDKPKDKPSTGAKE

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 58615; Mature: 58615

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDSMIHRKSHNASADVAMKRVDTRQHSGKLSKSIISLSALMLAMGSATAWASDNSVKPT
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCC
ESANTCYVEGVSDRLNCGFVTVPENPNKPDGKQIQVHYVVLPAVKNVNHEEALLAIAGGP
CCCCEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEECHHCCCCCCEEEEEECCC
GQSAIDNAAGFDSMLNKVRQQRDILLIDQRGTGRSNVLNCDAGPQSPLSFDDDNVDTLAE
CCHHHHHHCCHHHHHHHHHHHCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCHHHHHH
AQKCRDQFPDTDVTQYGSLNAVQDFEAVRAQLGYKKLHLYGISYGTRMAQLYMRLYPEHL
HHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHH
ATVTIDGIVPMQQSVLEIGSAIERGFDLLFKDCQDTAACHAEFPELKAEFDQVVAKLSQG
HEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
PVMEQVHDPVTGEKTLLTMTRSKFYGAIRMALYQTNVRALVPHAIHQAAKGNYQPLLGLF
CCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEE
ALTTDNAGMAMGMHASVVCGEDIHRITPAMREQAKTSYVGKTMLESLEASCSVWKVPPVD
EEECCCCCEEECCCEEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC
ANFSEPIKSDIPTLLLSGEIDPATPPSWGELAMEKLTNAKHFVAPYATHGVAYQSCANNL
CCCCCCHHHCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHCCHHHHHHHHHH
VAELVRTGSVNDLDGECLKKDVRRSFYLNASSVEPLATEDATHSSKDKPKDKPSTGAKE
HHHHHHCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIDSMIHRKSHNASADVAMKRVDTRQHSGKLSKSIISLSALMLAMGSATAWASDNSVKPT
CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCC
ESANTCYVEGVSDRLNCGFVTVPENPNKPDGKQIQVHYVVLPAVKNVNHEEALLAIAGGP
CCCCEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEECHHCCCCCCEEEEEECCC
GQSAIDNAAGFDSMLNKVRQQRDILLIDQRGTGRSNVLNCDAGPQSPLSFDDDNVDTLAE
CCHHHHHHCCHHHHHHHHHHHCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCCHHHHHH
AQKCRDQFPDTDVTQYGSLNAVQDFEAVRAQLGYKKLHLYGISYGTRMAQLYMRLYPEHL
HHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHH
ATVTIDGIVPMQQSVLEIGSAIERGFDLLFKDCQDTAACHAEFPELKAEFDQVVAKLSQG
HEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
PVMEQVHDPVTGEKTLLTMTRSKFYGAIRMALYQTNVRALVPHAIHQAAKGNYQPLLGLF
CCHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEE
ALTTDNAGMAMGMHASVVCGEDIHRITPAMREQAKTSYVGKTMLESLEASCSVWKVPPVD
EEECCCCCEEECCCEEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC
ANFSEPIKSDIPTLLLSGEIDPATPPSWGELAMEKLTNAKHFVAPYATHGVAYQSCANNL
CCCCCCHHHCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHCCCHHHCCHHHHHHHHHH
VAELVRTGSVNDLDGECLKKDVRRSFYLNASSVEPLATEDATHSSKDKPKDKPSTGAKE
HHHHHHCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]