| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is gpmI [H]
Identifier: 117918510
GI number: 117918510
Start: 60226
End: 61770
Strand: Reverse
Name: gpmI [H]
Synonym: Shewana3_0051
Alternate gene names: 117918510
Gene position: 61770-60226 (Counterclockwise)
Preceding gene: 117918516
Following gene: 117918509
Centisome position: 1.24
GC content: 51.07
Gene sequence:
>1545_bases ATGACGACAACTAAACGTCCAATTGCGTTGTTGATCCTCGATGGCTGGGGTTACCGTGAAAATACGCATATGAATGCGAT TTACCACGCCAACACACCAGTACTCGACCGTCTCAACGCCCAATATGCCCACGGTTTAATTTCAGGTTCAGGCTTAGATG TAGGTTTGCCCGATGGGCAGATGGGGAACTCTGAAGTAGGCCATATCAACTTAGGTTCTGGCCGAATCGTTTACCAAGAG CTGACTCGTATCAGCAAAGCCATTGCAGATCATGAGTTTGAACAAAATCCAGCCCTTTGTGATGCCGTTGATGCGGCAGT CAAAGCCGGTGGCGCAGTGCACATTATGGGTTTGCTCTCTCCCGGTGGCGTACACAGCCATGAAGAGCATATCGAAGCCA TGTGCCGTATGGCAGTGGCGCGCGGTGCCACTAAAGTGTACTTACATGCCTTCTTAGATGGTCGCGATACCCCACCTCGC AGCGCCAAAGGCAGCCTAAGCCACTTTGATGATCTGTTTACTACATTGGGCCATGGCCGTATCGCCTCAATTATTGGCCG TTACTTTGCCATGGACCGCGATAACCGTTGGGACCGTGTGTCTCAGGCTTACGAGCTGATCACTCAAGGCAAGGCGAAGT TCCAATACGATAATGCCGTGACCGCGTTAGAAGCCGCTTACGAGCGTAACGAAAACGATGAATTTGTGTCGTCTTCTGCC ATTACCGACAGCGAAGGCAAGGTTGCCAGCTTAAACGATGGCGACGCGCTGATTTTCATGAACTTCCGCGCCGACCGTGC TCGTCAAATCACCCGTAGCTTTATCAATGCCGATTTCGATGGTTTTGAACGTGCAGTGACGCCAAAGGTTAACTTTGTAA CGCTGACCGAATACGCAGCAGATATCAAAGCACCTATCGCTTATCCTTCTGAAAACCTAGTGAATACCTTAGGTGAAGTG CTGCAAAACCGTGGCCGTACTCAGTTACGTATCTCCGAAACTGAAAAATACGCCCATGTGACCTTCTTCTTCAACGGCGG TAAGGAAGAGCCATTCAACGGTGAAGATCGTATCCTGATCAACTCACCTAAAGTGGCAACCTACGACTTACAACCTGAGA TGAGCTCAACCGAGCTGACGGATAAGTTAGTCGCAGCGATTGAATCCGCTCAATACGATGTGATTATCTGTAACTACCCG AACGGTGATATGGTGGGTCATACTGGCAACTTCGATGCGGCGGTTAAAGCCTGCGAAGCTGTCGATGCCTGTATCGGCCG CGTAGTTGACGCACTGGCGAAAGTGGGCGGCGAATGTATTATTACCGCTGACCACGGCAACGCCGAGCAGATGACCGACG AAACCACTGGCCAAGCCCATACGGCGCATACCAGTGAGCTCGTGCCCTTTGTGTTTGTTGGCCGTGACGCCACCATAGAT GAAGGCGGTAAACTGAGCGATGTCGCCCCAACGATTCTGCACCTGATGGGTGAAACCATTCCCGCAGAGATGACGGGTAA GCCCTTAATCCACGTAAAAGAGTAG
Upstream 100 bases:
>100_bases ACCTTAATCTAGGTAAAGCGCTTTTTCGTACCCCGCTTACGTAGTAATATTTAACCAATTTCAGATTTCTTTAGCTTCCT TAAACTTTAAAGGTATCACC
Downstream 100 bases:
>100_bases TTGTTACCTAGTGAGCACTCGACTCCCCGTTAAAGCCAGCATTATTGCTGGCTTTATGATGTTATCTTTCTCGGTCTACG CTTCTGATTTGGAGAAGCGT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MTTTKRPIALLILDGWGYRENTHMNAIYHANTPVLDRLNAQYAHGLISGSGLDVGLPDGQMGNSEVGHINLGSGRIVYQE LTRISKAIADHEFEQNPALCDAVDAAVKAGGAVHIMGLLSPGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPR SAKGSLSHFDDLFTTLGHGRIASIIGRYFAMDRDNRWDRVSQAYELITQGKAKFQYDNAVTALEAAYERNENDEFVSSSA ITDSEGKVASLNDGDALIFMNFRADRARQITRSFINADFDGFERAVTPKVNFVTLTEYAADIKAPIAYPSENLVNTLGEV LQNRGRTQLRISETEKYAHVTFFFNGGKEEPFNGEDRILINSPKVATYDLQPEMSSTELTDKLVAAIESAQYDVIICNYP NGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITADHGNAEQMTDETTGQAHTAHTSELVPFVFVGRDATID EGGKLSDVAPTILHLMGETIPAEMTGKPLIHVKE
Sequences:
>Translated_514_residues MTTTKRPIALLILDGWGYRENTHMNAIYHANTPVLDRLNAQYAHGLISGSGLDVGLPDGQMGNSEVGHINLGSGRIVYQE LTRISKAIADHEFEQNPALCDAVDAAVKAGGAVHIMGLLSPGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPR SAKGSLSHFDDLFTTLGHGRIASIIGRYFAMDRDNRWDRVSQAYELITQGKAKFQYDNAVTALEAAYERNENDEFVSSSA ITDSEGKVASLNDGDALIFMNFRADRARQITRSFINADFDGFERAVTPKVNFVTLTEYAADIKAPIAYPSENLVNTLGEV LQNRGRTQLRISETEKYAHVTFFFNGGKEEPFNGEDRILINSPKVATYDLQPEMSSTELTDKLVAAIESAQYDVIICNYP NGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITADHGNAEQMTDETTGQAHTAHTSELVPFVFVGRDATID EGGKLSDVAPTILHLMGETIPAEMTGKPLIHVKE >Mature_513_residues TTTKRPIALLILDGWGYRENTHMNAIYHANTPVLDRLNAQYAHGLISGSGLDVGLPDGQMGNSEVGHINLGSGRIVYQEL TRISKAIADHEFEQNPALCDAVDAAVKAGGAVHIMGLLSPGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPRS AKGSLSHFDDLFTTLGHGRIASIIGRYFAMDRDNRWDRVSQAYELITQGKAKFQYDNAVTALEAAYERNENDEFVSSSAI TDSEGKVASLNDGDALIFMNFRADRARQITRSFINADFDGFERAVTPKVNFVTLTEYAADIKAPIAYPSENLVNTLGEVL QNRGRTQLRISETEKYAHVTFFFNGGKEEPFNGEDRILINSPKVATYDLQPEMSSTELTDKLVAAIESAQYDVIICNYPN GDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITADHGNAEQMTDETTGQAHTAHTSELVPFVFVGRDATIDE GGKLSDVAPTILHLMGETIPAEMTGKPLIHVKE
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=514, Percent_Identity=66.3424124513619, Blast_Score=706, Evalue=0.0, Organism=Caenorhabditis elegans, GI32564249, Length=522, Percent_Identity=42.911877394636, Blast_Score=414, Evalue=1e-116, Organism=Caenorhabditis elegans, GI17507741, Length=522, Percent_Identity=42.911877394636, Blast_Score=414, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 55921; Mature: 55790
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTKRPIALLILDGWGYRENTHMNAIYHANTPVLDRLNAQYAHGLISGSGLDVGLPDGQ CCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHCCHHHHHHEECCCCCEECCCCCC MGNSEVGHINLGSGRIVYQELTRISKAIADHEFEQNPALCDAVDAAVKAGGAVHIMGLLS CCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEECC PGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPRSAKGSLSHFDDLFTTLGHGR CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCH IASIIGRYFAMDRDNRWDRVSQAYELITQGKAKFQYDNAVTALEAAYERNENDEFVSSSA HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCHHHHHCC ITDSEGKVASLNDGDALIFMNFRADRARQITRSFINADFDGFERAVTPKVNFVTLTEYAA CCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEHHHH DIKAPIAYPSENLVNTLGEVLQNRGRTQLRISETEKYAHVTFFFNGGKEEPFNGEDRILI HCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCEEEE NSPKVATYDLQPEMSSTELTDKLVAAIESAQYDVIICNYPNGDMVGHTGNFDAAVKACEA ECCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHH VDACIGRVVDALAKVGGECIITADHGNAEQMTDETTGQAHTAHTSELVPFVFVGRDATID HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCCCCCHHCCCEEEEECCCCCCC EGGKLSDVAPTILHLMGETIPAEMTGKPLIHVKE CCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECC >Mature Secondary Structure TTTKRPIALLILDGWGYRENTHMNAIYHANTPVLDRLNAQYAHGLISGSGLDVGLPDGQ CCCCCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHCCHHHHHHEECCCCCEECCCCCC MGNSEVGHINLGSGRIVYQELTRISKAIADHEFEQNPALCDAVDAAVKAGGAVHIMGLLS CCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEECC PGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPRSAKGSLSHFDDLFTTLGHGR CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCH IASIIGRYFAMDRDNRWDRVSQAYELITQGKAKFQYDNAVTALEAAYERNENDEFVSSSA HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCHHHHHCC ITDSEGKVASLNDGDALIFMNFRADRARQITRSFINADFDGFERAVTPKVNFVTLTEYAA CCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEEEHHHH DIKAPIAYPSENLVNTLGEVLQNRGRTQLRISETEKYAHVTFFFNGGKEEPFNGEDRILI HCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCEEEE NSPKVATYDLQPEMSSTELTDKLVAAIESAQYDVIICNYPNGDMVGHTGNFDAAVKACEA ECCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHH VDACIGRVVDALAKVGGECIITADHGNAEQMTDETTGQAHTAHTSELVPFVFVGRDATID HHHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCCCCCCCCCCHHCCCEEEEECCCCCCC EGGKLSDVAPTILHLMGETIPAEMTGKPLIHVKE CCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA