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The map label for this gene is yjbI [H]

Identifier: 117918501

GI number: 117918501

Start: 48030

End: 48467

Strand: Reverse

Name: yjbI [H]

Synonym: Shewana3_0042

Alternate gene names: 117918501

Gene position: 48467-48030 (Counterclockwise)

Preceding gene: 117918504

Following gene: 117918494

Centisome position: 0.97

GC content: 46.58

Gene sequence:

>438_bases
ATGAACTGGCTTAAAAAGATTTTTAGTAAACACACAAGTGCGCCGGATGACAGGGATCCGAATCAGTCGAATGCCTATGA
TTTAATTGGTGGCGACAAAGTGATCCGTGCTATTGCCAATAGTTTTTATCAGAAAATGGCAAGCTCGGAAGAAACACGAG
CCTTATTCGCGATTCACCGTGCACCGATTGCGGAGTCGGAGCAGAAGCTCTATGAGTTTTTAAGTGGCTGGCTCGGCGGT
CCGCAGTTATATCAGCAAAAGTATGGTCATCCCGCATTACGCGCACGCCATATGCCCTTCGCTGTAGATGAGACGATGCG
GGATCAATGGCTATTTTGCATGAAGTTTGCCATTGAAAAGCATATAAAAAAGCCAGAGCATCGCGCCGCTATCTATGAGG
CGATTTCCACTCTGGCCGATCATATGCGTAATCAGTAA

Upstream 100 bases:

>100_bases
CGAGTCTAAGTTGTTGTACCTGACTTTAGCCCCCTGTTTCGCAGTGGCATTCAGGCTATAATGCGCGCATCAATATTGTA
GATGCAGTGCAGTTAGACCT

Downstream 100 bases:

>100_bases
AGTACGATTACGCAATTCATATTAGCGTGCTTATACCCAATCTCGAGGCTTGAGGTAGTTATCGTAAAGCTCTGCCTCAG
GGCTACCCGCCTCTGGCGTA

Product: globin

Products: NA

Alternate protein names: Truncated Hb; trHbO; Hemoglobin-like protein yjbI; Truncated BHb [H]

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MNWLKKIFSKHTSAPDDRDPNQSNAYDLIGGDKVIRAIANSFYQKMASSEETRALFAIHRAPIAESEQKLYEFLSGWLGG
PQLYQQKYGHPALRARHMPFAVDETMRDQWLFCMKFAIEKHIKKPEHRAAIYEAISTLADHMRNQ

Sequences:

>Translated_145_residues
MNWLKKIFSKHTSAPDDRDPNQSNAYDLIGGDKVIRAIANSFYQKMASSEETRALFAIHRAPIAESEQKLYEFLSGWLGG
PQLYQQKYGHPALRARHMPFAVDETMRDQWLFCMKFAIEKHIKKPEHRAAIYEAISTLADHMRNQ
>Mature_145_residues
MNWLKKIFSKHTSAPDDRDPNQSNAYDLIGGDKVIRAIANSFYQKMASSEETRALFAIHRAPIAESEQKLYEFLSGWLGG
PQLYQQKYGHPALRARHMPFAVDETMRDQWLFCMKFAIEKHIKKPEHRAAIYEAISTLADHMRNQ

Specific function: Hemoglobin-like protein that exhibits a low peroxidase activity. Its very high oxygen affinity may rule out the possibility that it is involved in oxygen transport [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group II subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 16810; Mature: 16810

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWLKKIFSKHTSAPDDRDPNQSNAYDLIGGDKVIRAIANSFYQKMASSEETRALFAIHR
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
APIAESEQKLYEFLSGWLGGPQLYQQKYGHPALRARHMPFAVDETMRDQWLFCMKFAIEK
CCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
HIKKPEHRAAIYEAISTLADHMRNQ
HHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNWLKKIFSKHTSAPDDRDPNQSNAYDLIGGDKVIRAIANSFYQKMASSEETRALFAIHR
CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
APIAESEQKLYEFLSGWLGGPQLYQQKYGHPALRARHMPFAVDETMRDQWLFCMKFAIEK
CCCCHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
HIKKPEHRAAIYEAISTLADHMRNQ
HHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]