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The map label for this gene is trkA [H]

Identifier: 117918491

GI number: 117918491

Start: 38658

End: 40067

Strand: Reverse

Name: trkA [H]

Synonym: Shewana3_0032

Alternate gene names: 117918491

Gene position: 40067-38658 (Counterclockwise)

Preceding gene: 117918492

Following gene: 117918490

Centisome position: 0.81

GC content: 51.77

Gene sequence:

>1410_bases
ATGAAAATTATCATATTAGGTGCGGGTCAAGTCGGGGGAACCTTGGCCGAAAATTTGGTGGGTGAAAATAACGATATCAC
CATAGTCGATAGCGACAAATCCAGATTACGCGCCCTGCAGGATAAATATGACCTTCGCGTCGTGGCGGGCCACGGTGCCC
ACCCCGATGTACTCAAAGAAGCTGGCGCCGAAGATGCCGACATGCTGATTGCTGTGACCAACAGCGATGAATGCAACATG
GTCGCCTGCCAAATGGCCTACAGCCTATTTGGTACACCGACTAAAATCGCCCGTATTCGCTCCGAACCTTATCTGGCGAT
GCGTGATAAATTATTTATCGACAGTGAAACCAAAAATAGTGAGGGGCGCCCTCGCGGTGGTTTTGTGATCGATGAACTTA
TCGCACCTGAGCAGTTAGTGACCGCTTACATTCAACGTTTGGTTGAATATCCAGGGGCACTGCAAGTGCTCGAATTTGCC
GAAGGCCGTTTAAGTTTGGTTGCAGTTCGTGCCTATTACGGCGGCCCTTTGGTCGGTAATGCCTTGGCTGCGCTTCGCGA
GCATATGCCAAATATTGATACCCGGGTGGCGGCGATTTTCCGCCAAGGTCGCCCTATCATGCCCCGTGGCACAACGATTA
TCGAAGCCGATGACGAAGTGTTTTTCGTGGCCGACAGTCGCCATATCCGCGCGGTGATGAGTGAAATGCAAAAGCTGGAT
AACTCCTACCGCAATATCATGATTGCTGGCGGTGGTAACATCGGCTTAGGCCTGGCTAAACGCCTCGAACGCACCCACTC
AGTCAAGCTGATTGAACATAAGTTTGAACGGGCCGAAACGCTCTCTGAACAGCTTGAAAACACTACAGTATTTTGTGGTG
ACGCCTCAGATCAAGAGTTGCTGCTCGAAGAACATATCGACCAAACTGACGTGTTTATTGCCGTCACCAACGACGATGAA
GCCAACATCATGTCCGCCCTGCTCGCTAAACGCATGGGGGCGAAAAAGGTGATGGTGCTGATCCAGCGTGAGGCCTATGT
GGATATTGTGCAGGAAGCGAATATCGATATCGCGATTTCACCCCAGCAGGCGACGATTTCAGCCTTACTGACCCACATCC
GCCAAGGCGATATCTGTAACGTGTATTCCTTACGCCGCGGCGCCGCCGAAGCGATTGAAGCCATTGCCCATGGCGACTCC
AGCACCTCTAAGGTCGTTGGCAAGGCGATTGGCGATATCAAGCTGCCGCCGGGAACCACCATTGGCGCCATTGTGCGTAA
CGAAGAAGTGCTGATGGCCCACGACAAGACAGTGATAGAGCAAGGGGATCACGTGATTCTGTTCCTCGTGAACAAAAAGT
TTGTCGGCGAAGTCGAGAAACTGTTCCAACCTAGCGCCTTCTTCTTCTAA

Upstream 100 bases:

>100_bases
CCAAGATATAGGTTGGCAAATCACGCCGGGACAACACAACATGGACGGGTTTTATTACGCCCGTTTATTGAAAGCGACCC
ATTAGGAAGTAAGCAAGGCC

Downstream 100 bases:

>100_bases
GTCATCATCTTATGCTGAACTTTAGACCGCTATTGTTTATTTTGGGGCTGTTTCTGTCGATGTTAACAGCCTTTATGTTA
GCGCCCCTGCTCCTTGCCGT

Product: potassium transporter peripheral membrane component

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MKIIILGAGQVGGTLAENLVGENNDITIVDSDKSRLRALQDKYDLRVVAGHGAHPDVLKEAGAEDADMLIAVTNSDECNM
VACQMAYSLFGTPTKIARIRSEPYLAMRDKLFIDSETKNSEGRPRGGFVIDELIAPEQLVTAYIQRLVEYPGALQVLEFA
EGRLSLVAVRAYYGGPLVGNALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHIRAVMSEMQKLD
NSYRNIMIAGGGNIGLGLAKRLERTHSVKLIEHKFERAETLSEQLENTTVFCGDASDQELLLEEHIDQTDVFIAVTNDDE
ANIMSALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAISPQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDS
STSKVVGKAIGDIKLPPGTTIGAIVRNEEVLMAHDKTVIEQGDHVILFLVNKKFVGEVEKLFQPSAFFF

Sequences:

>Translated_469_residues
MKIIILGAGQVGGTLAENLVGENNDITIVDSDKSRLRALQDKYDLRVVAGHGAHPDVLKEAGAEDADMLIAVTNSDECNM
VACQMAYSLFGTPTKIARIRSEPYLAMRDKLFIDSETKNSEGRPRGGFVIDELIAPEQLVTAYIQRLVEYPGALQVLEFA
EGRLSLVAVRAYYGGPLVGNALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHIRAVMSEMQKLD
NSYRNIMIAGGGNIGLGLAKRLERTHSVKLIEHKFERAETLSEQLENTTVFCGDASDQELLLEEHIDQTDVFIAVTNDDE
ANIMSALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAISPQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDS
STSKVVGKAIGDIKLPPGTTIGAIVRNEEVLMAHDKTVIEQGDHVILFLVNKKFVGEVEKLFQPSAFFF
>Mature_469_residues
MKIIILGAGQVGGTLAENLVGENNDITIVDSDKSRLRALQDKYDLRVVAGHGAHPDVLKEAGAEDADMLIAVTNSDECNM
VACQMAYSLFGTPTKIARIRSEPYLAMRDKLFIDSETKNSEGRPRGGFVIDELIAPEQLVTAYIQRLVEYPGALQVLEFA
EGRLSLVAVRAYYGGPLVGNALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHIRAVMSEMQKLD
NSYRNIMIAGGGNIGLGLAKRLERTHSVKLIEHKFERAETLSEQLENTTVFCGDASDQELLLEEHIDQTDVFIAVTNDDE
ANIMSALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAISPQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDS
STSKVVGKAIGDIKLPPGTTIGAIVRNEEVLMAHDKTVIEQGDHVILFLVNKKFVGEVEKLFQPSAFFF

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK N-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=469, Percent_Identity=70.7889125799574, Blast_Score=678, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 51400; Mature: 51400

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIILGAGQVGGTLAENLVGENNDITIVDSDKSRLRALQDKYDLRVVAGHGAHPDVLKE
CEEEEEECCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHH
AGAEDADMLIAVTNSDECNMVACQMAYSLFGTPTKIARIRSEPYLAMRDKLFIDSETKNS
CCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEECCEEEEECCCCCC
EGRPRGGFVIDELIAPEQLVTAYIQRLVEYPGALQVLEFAEGRLSLVAVRAYYGGPLVGN
CCCCCCCEEHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEEHHCCCHHHH
ALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHIRAVMSEMQKLD
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHC
NSYRNIMIAGGGNIGLGLAKRLERTHSVKLIEHKFERAETLSEQLENTTVFCGDASDQEL
CHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHH
LLEEHIDQTDVFIAVTNDDEANIMSALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAIS
HHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCCEEEEEC
PQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDSSTSKVVGKAIGDIKLPPGTT
CCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCE
IGAIVRNEEVLMAHDKTVIEQGDHVILFLVNKKFVGEVEKLFQPSAFFF
EEEEEECCEEEEECCCHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKIIILGAGQVGGTLAENLVGENNDITIVDSDKSRLRALQDKYDLRVVAGHGAHPDVLKE
CEEEEEECCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHHH
AGAEDADMLIAVTNSDECNMVACQMAYSLFGTPTKIARIRSEPYLAMRDKLFIDSETKNS
CCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEECCEEEEECCCCCC
EGRPRGGFVIDELIAPEQLVTAYIQRLVEYPGALQVLEFAEGRLSLVAVRAYYGGPLVGN
CCCCCCCEEHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEEHHCCCHHHH
ALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHIRAVMSEMQKLD
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHC
NSYRNIMIAGGGNIGLGLAKRLERTHSVKLIEHKFERAETLSEQLENTTVFCGDASDQEL
CHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHH
LLEEHIDQTDVFIAVTNDDEANIMSALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAIS
HHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHCCEEEEEC
PQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDSSTSKVVGKAIGDIKLPPGTT
CCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCE
IGAIVRNEEVLMAHDKTVIEQGDHVILFLVNKKFVGEVEKLFQPSAFFF
EEEEEECCEEEEECCCHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7948029; 9720051 [H]