Click here to switch to the map view.

The map label for this gene is 117918474

Identifier: 117918474

GI number: 117918474

Start: 17706

End: 18749

Strand: Direct

Name: 117918474

Synonym: Shewana3_0015

Alternate gene names: NA

Gene position: 17706-18749 (Clockwise)

Preceding gene: 117918473

Following gene: 117918477

Centisome position: 0.36

GC content: 46.36

Gene sequence:

>1044_bases
TTGATTAAGTCCATATTTAATAAAATTTTTAATATCCGCGAAGAGACAATACTGGAGCGACCTAAAAGCTTTAGTCAAAC
CGATCTCAGTAAATCGTTGGACAAAGTTTCAGCCCCTAAACGCCAAGAAGAACCCGTTGATACCGTGGTGAGTGTCGACT
TAGAGGCGTTATTTTATAGTCTGTTGTTTCCTGCCAGAACCAAAGATGCTGGTGGCGTTGCCAATAACCTTGAGCGGCGA
GTCATGGCAGAAATAGAGCTCGCCTTAGCATCGCCACAAGTGATAGCAGAAAAGGTGCTTAAGCTTCCCTCTAAGGTGTT
GGAATTAGACCGTAAGTTAGCTGAGCCACAGTTTGATACTAAGGACTTGTTGGCGTTAATCGAGAAAGATCCCTTACTAA
GCGTCGAAGTGCTTAAGCTGTGCAACTCACCAGCCTTTAAGCGTGGAGATAGAGAGGTCACAAGCCTGCAGCAGGCTTTA
GTGCAGCTCGGCCGTGAACAGTTACGCCGCTTTGTGACGAGTTGCCTAGTGCGTGAGATGCTCGATATTAAACCCATTTA
TTTTCGGCGCTTTGGTGCCGAAATTTGGCGTCATTCGATGCAGGTTGCCTTTTTAACCAGCGAACTGAGTGAAGAAGATA
GAGACACGGCATTCCTATTAGGACTACTGCATGATGTGGGTAAGCTCGCCATCTTTAAAATGTTGCTCGATGCCTTTGTG
CAGGCAGAACCGGGGGAGCAGCCAAATTCTTGGTTATTCCGACAAGTGATGACAGCAAAATCACTCACCTTAAGTGCTTT
GTTGGCAAAGCATTGGCAATTGCCAAGTACCTTTGAAACCGAGCTTGATAAATTAGCCCATGTCCATACTCGGCCGAATG
AGGGAATTGCCGCTGTGGTTTGGCGCGCCAATATCATCAGTGAGATTTCGATGTTGCAGCAAGCGGGAAAATTGCCTGCA
GATATGCTGAGCAACTTGTTAGCCTTGGTTGGACTCGAGCCTGCTCAATTCGAAGCGTTGCACGAAAAACTTCAGCAGTT
TTAA

Upstream 100 bases:

>100_bases
AAGCTGCGCGTAATACATAATGTGACCACTAGTATATGAACTACAATGGACTGATAATTATGCAGGGTCAGTTAACTCAG
CTCTAATAGGTTGGAACGTC

Downstream 100 bases:

>100_bases
TATATTGCAGCCAATAAAAAACGCGCTATAAGCGCGTTTTTTATTGGCACTCTAACGTGCAACTTACTGAAGCAGAGAAA
TATCCGCTACATGTAAGAAC

Product: putative signal transduction protein

Products: NA

Alternate protein names: Metal Dependent Phosphohydrolase; Sensor Histidine Kinase; HD Domain-Containing Protein; Histidine Kinase; HDIG Domain-Containing Protein; Metal Dependent Phosphohydrolase Superfamily Protein; Transcriptional Regulator Fis Family; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MIKSIFNKIFNIREETILERPKSFSQTDLSKSLDKVSAPKRQEEPVDTVVSVDLEALFYSLLFPARTKDAGGVANNLERR
VMAEIELALASPQVIAEKVLKLPSKVLELDRKLAEPQFDTKDLLALIEKDPLLSVEVLKLCNSPAFKRGDREVTSLQQAL
VQLGREQLRRFVTSCLVREMLDIKPIYFRRFGAEIWRHSMQVAFLTSELSEEDRDTAFLLGLLHDVGKLAIFKMLLDAFV
QAEPGEQPNSWLFRQVMTAKSLTLSALLAKHWQLPSTFETELDKLAHVHTRPNEGIAAVVWRANIISEISMLQQAGKLPA
DMLSNLLALVGLEPAQFEALHEKLQQF

Sequences:

>Translated_347_residues
MIKSIFNKIFNIREETILERPKSFSQTDLSKSLDKVSAPKRQEEPVDTVVSVDLEALFYSLLFPARTKDAGGVANNLERR
VMAEIELALASPQVIAEKVLKLPSKVLELDRKLAEPQFDTKDLLALIEKDPLLSVEVLKLCNSPAFKRGDREVTSLQQAL
VQLGREQLRRFVTSCLVREMLDIKPIYFRRFGAEIWRHSMQVAFLTSELSEEDRDTAFLLGLLHDVGKLAIFKMLLDAFV
QAEPGEQPNSWLFRQVMTAKSLTLSALLAKHWQLPSTFETELDKLAHVHTRPNEGIAAVVWRANIISEISMLQQAGKLPA
DMLSNLLALVGLEPAQFEALHEKLQQF
>Mature_347_residues
MIKSIFNKIFNIREETILERPKSFSQTDLSKSLDKVSAPKRQEEPVDTVVSVDLEALFYSLLFPARTKDAGGVANNLERR
VMAEIELALASPQVIAEKVLKLPSKVLELDRKLAEPQFDTKDLLALIEKDPLLSVEVLKLCNSPAFKRGDREVTSLQQAL
VQLGREQLRRFVTSCLVREMLDIKPIYFRRFGAEIWRHSMQVAFLTSELSEEDRDTAFLLGLLHDVGKLAIFKMLLDAFV
QAEPGEQPNSWLFRQVMTAKSLTLSALLAKHWQLPSTFETELDKLAHVHTRPNEGIAAVVWRANIISEISMLQQAGKLPA
DMLSNLLALVGLEPAQFEALHEKLQQF

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39243; Mature: 39243

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA