Definition Shewanella sp. ANA-3 plasmid 1, complete sequence.
Accession NC_008573
Length 278,942

Click here to switch to the map view.

The map label for this gene is 117676135

Identifier: 117676135

GI number: 117676135

Start: 58048

End: 58335

Strand: Reverse

Name: 117676135

Synonym: Shewana3_4195

Alternate gene names: NA

Gene position: 58335-58048 (Counterclockwise)

Preceding gene: 117676136

Following gene: 117676134

Centisome position: 20.91

GC content: 36.46

Gene sequence:

>288_bases
ATGAGTAAATTAGAAGGTGGCAGTAAAAGCGAGATTATGGATCGTCGAGAGCAGCGTTTTTTTGCGATTTTCGATGCTTC
TTTTTTAATAACTGGGCTTTTTGGATATGTACTGCTTTTTAATGCGACCAAAGAGGATTTAATCGTTTTAATTGGGGTCG
TTAATTCGTATGTGCTATTGAATCAGCTTGTTAAGGCAAGTTTCAACTTCAATTACATCCTCAAAGTGGCAGTTATATCT
ATCGTCTTTAGCGCGATATACCGCTTTTTAGCTTCACTAGCAATTTAA

Upstream 100 bases:

>100_bases
GCCGCTTAGTGAAAGAGCCTTTGTAGTCGATATTTAACCCCCAAGGGTACACAAGTGCCTTTGGGCTGCGTGTACCTTTA
ATCAGTAGTGAGGACACGCT

Downstream 100 bases:

>100_bases
CCAAGACAGTTAATGCTGCCATTGCAGCTTAACATCAAAATTTAACCCTTGGGGTGAGTAATGTCCCCTAGGGCCATAGC
TCACCCTTTTTTGTTTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSKLEGGSKSEIMDRREQRFFAIFDASFLITGLFGYVLLFNATKEDLIVLIGVVNSYVLLNQLVKASFNFNYILKVAVIS
IVFSAIYRFLASLAI

Sequences:

>Translated_95_residues
MSKLEGGSKSEIMDRREQRFFAIFDASFLITGLFGYVLLFNATKEDLIVLIGVVNSYVLLNQLVKASFNFNYILKVAVIS
IVFSAIYRFLASLAI
>Mature_94_residues
SKLEGGSKSEIMDRREQRFFAIFDASFLITGLFGYVLLFNATKEDLIVLIGVVNSYVLLNQLVKASFNFNYILKVAVISI
VFSAIYRFLASLAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10694; Mature: 10563

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLEGGSKSEIMDRREQRFFAIFDASFLITGLFGYVLLFNATKEDLIVLIGVVNSYVLL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
NQLVKASFNFNYILKVAVISIVFSAIYRFLASLAI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKLEGGSKSEIMDRREQRFFAIFDASFLITGLFGYVLLFNATKEDLIVLIGVVNSYVLL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
NQLVKASFNFNYILKVAVISIVFSAIYRFLASLAI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA