The gene/protein map for NC_008564 is currently unavailable.
Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

Click here to switch to the map view.

The map label for this gene is 117621643

Identifier: 117621643

GI number: 117621643

Start: 57699

End: 57836

Strand: Reverse

Name: 117621643

Synonym: BAPKO_2072

Alternate gene names: NA

Gene position: 57836-57699 (Counterclockwise)

Preceding gene: NA

Following gene: 117621642

Centisome position: 96.46

GC content: 21.01

Gene sequence:

>138_bases
ATGCAATCCCAAGCAAAAACAAAGCTTTCAATAAAAATTTTTAAAATTAATATAACTTATCAAGTACAATATCAACACCA
TATCAATGGCACTACAAATAAATTGAAAAATCAAACGAAAAATTTTAATTTTTTTTAA

Upstream 100 bases:

>100_bases
CGGGAATTATAAAACTTAAATTTTACATTAATATGGGGAGAACGGTGTTATTTTATAATAGTTAGATTTATTATTATAAA
ATAACACATGAAATAATATA

Downstream 100 bases:

>100_bases
AAAAAAAATTATTTTAAATGATTAATTTAATATCTTTTATTTTAAATAACTAAAACAAGCATTGAAAATTAAATAAATTG
AAATATATTTCTATATAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 45; Mature: 45

Protein sequence:

>45_residues
MQSQAKTKLSIKIFKINITYQVQYQHHINGTTNKLKNQTKNFNFF

Sequences:

>Translated_45_residues
MQSQAKTKLSIKIFKINITYQVQYQHHINGTTNKLKNQTKNFNFF
>Mature_45_residues
MQSQAKTKLSIKIFKINITYQVQYQHHINGTTNKLKNQTKNFNFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5388; Mature: 5388

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSQAKTKLSIKIFKINITYQVQYQHHINGTTNKLKNQTKNFNFF
CCCCCCEEEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQSQAKTKLSIKIFKINITYQVQYQHHINGTTNKLKNQTKNFNFF
CCCCCCEEEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA