| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
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The map label for this gene is 117621642
Identifier: 117621642
GI number: 117621642
Start: 56660
End: 57541
Strand: Reverse
Name: 117621642
Synonym: BAPKO_2071
Alternate gene names: NA
Gene position: 57541-56660 (Counterclockwise)
Preceding gene: 117621643
Following gene: 117621641
Centisome position: 95.97
GC content: 26.53
Gene sequence:
>882_bases TTGAAAAAAAATACCGTTTATAAAATATTAAAGCTATTTACAATAACCTTACTATTCTCATGTTCTTTTTATTCTAAATC AAACAACACAGAAGCAATAAGTGAATTACAACAAAACTCCATTGAAATTAAAAACTCTGGGATTGGGAAAACAGAAAATC TTAAAAATATTCAAAACTTACAACAAAACCAGCTCCTAAACAATGAAAAGGAAATGGTAATTAAAAACTTTACACAAAGA TTAAATGAAAATGAAAAATTAATTCAAAAAATAGGACCGAATATTTCTATATTTGCTCCGAAAATAAATAAAGATGTTTT AAAAATCGAACCCATTGATCAATTTAGAATAAATAAAAACACATTCCCGGAAAATACTCAAAGTCATATACTTAATTTAA CATTAAAAGATAATCAAATTAGAAGATTATTTTATTCATCTCTAGATTATAATGAAAATAAAATCAAAAAATTGATCTCA ATACTTGAACAAGCATCAAGCTCAACTGGCTACCATTATAATGTTATTGGCTTAATTTTTTGGACAGGATTTAAAACCCA AGAATCATTTGAAAAAGCTGTCAATCTTTTAACTAAAAACGAACAAAGACGCCTAATGTTTAACTTTGATACAAAAACAG TAAAAGATATTCAAGAAAAATTTGAAAAACTAATGCAAAATAGAAATGATTGGATAAAAACTGTAGAGAAAATTATTGAC GAATATGACAACAATATAGCAAATGTCAAAGCTGACGGAATGATTCTAGGAGAAATGTTAAGGCTTGAATACGAACATAA ATTAAACCCAGATGAAAGTATGCGAATTGCAAATGATATTGAAACATTGCTAAAAGCCTGTTGTGACCACACACACTACT AA
Upstream 100 bases:
>100_bases AGCATTGAAAATTAAATAAATTGAAATATATTTCTATATAGAAATATTGAGCTTGCCAAATAAATAACGCTAATGATTAA ATTTTTTAAAGGATTATGTC
Downstream 100 bases:
>100_bases TTAGTAGTGTGTGTATTAAAGGATTAAATATTGAAAAACAAAAATCAAAGTTCAAAATATAAATTTAATCTTTTAATACA AAGTTAAACTAATATTATTT
Product: antigen, P35, putative
Products: NA
Alternate protein names: Antigen; Surface Antigen
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MKKNTVYKILKLFTITLLFSCSFYSKSNNTEAISELQQNSIEIKNSGIGKTENLKNIQNLQQNQLLNNEKEMVIKNFTQR LNENEKLIQKIGPNISIFAPKINKDVLKIEPIDQFRINKNTFPENTQSHILNLTLKDNQIRRLFYSSLDYNENKIKKLIS ILEQASSSTGYHYNVIGLIFWTGFKTQESFEKAVNLLTKNEQRRLMFNFDTKTVKDIQEKFEKLMQNRNDWIKTVEKIID EYDNNIANVKADGMILGEMLRLEYEHKLNPDESMRIANDIETLLKACCDHTHY
Sequences:
>Translated_293_residues MKKNTVYKILKLFTITLLFSCSFYSKSNNTEAISELQQNSIEIKNSGIGKTENLKNIQNLQQNQLLNNEKEMVIKNFTQR LNENEKLIQKIGPNISIFAPKINKDVLKIEPIDQFRINKNTFPENTQSHILNLTLKDNQIRRLFYSSLDYNENKIKKLIS ILEQASSSTGYHYNVIGLIFWTGFKTQESFEKAVNLLTKNEQRRLMFNFDTKTVKDIQEKFEKLMQNRNDWIKTVEKIID EYDNNIANVKADGMILGEMLRLEYEHKLNPDESMRIANDIETLLKACCDHTHY >Mature_293_residues MKKNTVYKILKLFTITLLFSCSFYSKSNNTEAISELQQNSIEIKNSGIGKTENLKNIQNLQQNQLLNNEKEMVIKNFTQR LNENEKLIQKIGPNISIFAPKINKDVLKIEPIDQFRINKNTFPENTQSHILNLTLKDNQIRRLFYSSLDYNENKIKKLIS ILEQASSSTGYHYNVIGLIFWTGFKTQESFEKAVNLLTKNEQRRLMFNFDTKTVKDIQEKFEKLMQNRNDWIKTVEKIID EYDNNIANVKADGMILGEMLRLEYEHKLNPDESMRIANDIETLLKACCDHTHY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34372; Mature: 34372
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNTVYKILKLFTITLLFSCSFYSKSNNTEAISELQQNSIEIKNSGIGKTENLKNIQNL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEECCCCCCCCHHHHHHHHH QQNQLLNNEKEMVIKNFTQRLNENEKLIQKIGPNISIFAPKINKDVLKIEPIDQFRINKN HHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCCEEECCCHHHCCCCC TFPENTQSHILNLTLKDNQIRRLFYSSLDYNENKIKKLISILEQASSSTGYHYNVIGLIF CCCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEH WTGFKTQESFEKAVNLLTKNEQRRLMFNFDTKTVKDIQEKFEKLMQNRNDWIKTVEKIID CCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EYDNNIANVKADGMILGEMLRLEYEHKLNPDESMRIANDIETLLKACCDHTHY HHCCCCCCEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKNTVYKILKLFTITLLFSCSFYSKSNNTEAISELQQNSIEIKNSGIGKTENLKNIQNL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEECCCCCCCCHHHHHHHHH QQNQLLNNEKEMVIKNFTQRLNENEKLIQKIGPNISIFAPKINKDVLKIEPIDQFRINKN HHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCCEEECCCHHHCCCCC TFPENTQSHILNLTLKDNQIRRLFYSSLDYNENKIKKLISILEQASSSTGYHYNVIGLIF CCCCCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEH WTGFKTQESFEKAVNLLTKNEQRRLMFNFDTKTVKDIQEKFEKLMQNRNDWIKTVEKIID CCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EYDNNIANVKADGMILGEMLRLEYEHKLNPDESMRIANDIETLLKACCDHTHY HHCCCCCCEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA