The gene/protein map for NC_008564 is currently unavailable.
Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

Click here to switch to the map view.

The map label for this gene is 117621637

Identifier: 117621637

GI number: 117621637

Start: 51638

End: 52450

Strand: Reverse

Name: 117621637

Synonym: BAPKO_2066

Alternate gene names: NA

Gene position: 52450-51638 (Counterclockwise)

Preceding gene: 117621638

Following gene: 117621636

Centisome position: 87.48

GC content: 27.18

Gene sequence:

>813_bases
TTGACAAAAACTAAATTAAATATAATTAAGCTTAATATTATTACAGCAATATTAACTTTAATTTACATCTCGTGCACCGT
TAATAAAATTGATCTTAAGCCAAAAAGCAAAACTAATCCAAAAGAAAAAACCCAAAATTTATTTCAAGAATCTAAAGATC
TAGCACCTTCAAATCAAGAACCTAAAGATCTAAAGCCTTTAAATCAGGAACCTCAAACTCTAAAGCCTTTAAAAAAGGAA
TCTCTAGAAACTATAATTTCAAAATTAAAAGAAATTGCCAAAAAGTTAGAAACTCAAAAAGAGCAAGAAGACCAAGAAAT
AGCTAAAATTGCTACTGAAAAATTTGATTTTCTGAATACTTTTACAATTGGACCTTATGATATTGTTGAAGAAAGGGCTC
AAACACAAATAAAAAGAATAATTTACTCATCTTTAAATTACGAAAAAGAAAAAATAAAGACATTAGAAGAAATTCTTGAA
AAACTTAAAAAAAATCGCCAAAACCAAATTATAGCTACAAGATTTATTCATCACACATCGTGGGGCATTCAATCCAACCT
GGAGAATGATTTAAAATCAATAAAAAAAGCAACAGAAGACAATATACACACCCTAAGTAAAGAAGCAGCTAAAAAGATAC
TAATAGAAGTAGAATCTAACTTAGAGCTAAAACAAGGGTTTGCAAAAAAAATAAATGAAACTCTAAAGGCTTACAATCAA
GATTCTCAAAACATTAAAACTAATGATGAAGAATTAGCAAAGAATATTGATGAAAATTACAAAAACTCCGATTCTTTAAA
ACCCATCAATTAG

Upstream 100 bases:

>100_bases
AAAATTAAACTAATATCATTAACCAAAAAAACAATAAAGTTGTATTATTTTTTTGTATTACAATTAATATTTATTAATTG
TATTTTATAAGGAGAGAATT

Downstream 100 bases:

>100_bases
CAATCTAAACAAAAAAATACGTTGTAATTATTATTGTTTAAAAAGAGAAGTTAATTCTTCTCTTTTTTTTTTAAAAAAAA
ATCGCTTAATCTTTGAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: Complement Regulator Acquiring; Crasp-1 Outer Surface Protein; Crasp-1ss Outer Surface Protein; Antigen P; Bbcrasp-1 Protein

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MTKTKLNIIKLNIITAILTLIYISCTVNKIDLKPKSKTNPKEKTQNLFQESKDLAPSNQEPKDLKPLNQEPQTLKPLKKE
SLETIISKLKEIAKKLETQKEQEDQEIAKIATEKFDFLNTFTIGPYDIVEERAQTQIKRIIYSSLNYEKEKIKTLEEILE
KLKKNRQNQIIATRFIHHTSWGIQSNLENDLKSIKKATEDNIHTLSKEAAKKILIEVESNLELKQGFAKKINETLKAYNQ
DSQNIKTNDEELAKNIDENYKNSDSLKPIN

Sequences:

>Translated_270_residues
MTKTKLNIIKLNIITAILTLIYISCTVNKIDLKPKSKTNPKEKTQNLFQESKDLAPSNQEPKDLKPLNQEPQTLKPLKKE
SLETIISKLKEIAKKLETQKEQEDQEIAKIATEKFDFLNTFTIGPYDIVEERAQTQIKRIIYSSLNYEKEKIKTLEEILE
KLKKNRQNQIIATRFIHHTSWGIQSNLENDLKSIKKATEDNIHTLSKEAAKKILIEVESNLELKQGFAKKINETLKAYNQ
DSQNIKTNDEELAKNIDENYKNSDSLKPIN
>Mature_269_residues
TKTKLNIIKLNIITAILTLIYISCTVNKIDLKPKSKTNPKEKTQNLFQESKDLAPSNQEPKDLKPLNQEPQTLKPLKKES
LETIISKLKEIAKKLETQKEQEDQEIAKIATEKFDFLNTFTIGPYDIVEERAQTQIKRIIYSSLNYEKEKIKTLEEILEK
LKKNRQNQIIATRFIHHTSWGIQSNLENDLKSIKKATEDNIHTLSKEAAKKILIEVESNLELKQGFAKKINETLKAYNQD
SQNIKTNDEELAKNIDENYKNSDSLKPIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31221; Mature: 31090

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TKTKLNIIKLNIITAILTLIYISCTVNKIDLKPKSKTNPKEKTQNLFQESKDLAPSNQE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PKDLKPLNQEPQTLKPLKKESLETIISKLKEIAKKLETQKEQEDQEIAKIATEKFDFLNT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTIGPYDIVEERAQTQIKRIIYSSLNYEKEKIKTLEEILEKLKKNRQNQIIATRFIHHTS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
WGIQSNLENDLKSIKKATEDNIHTLSKEAAKKILIEVESNLELKQGFAKKINETLKAYNQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
DSQNIKTNDEELAKNIDENYKNSDSLKPIN
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA