Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

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The map label for this gene is 117621636

Identifier: 117621636

GI number: 117621636

Start: 50661

End: 51437

Strand: Reverse

Name: 117621636

Synonym: BAPKO_2065

Alternate gene names: NA

Gene position: 51437-50661 (Counterclockwise)

Preceding gene: 117621637

Following gene: 117621635

Centisome position: 85.79

GC content: 27.93

Gene sequence:

>777_bases
TTGACAAAAACTAAATCAGATATAATTAAGCTTAATATAATTACAACAATATTAGCTTTAATTTGCATTTCATGCGCGCC
TATTAATAAAATTGATCCTAAACCAAAAAAACACACCAATGCAAAAGAAAAAACCCAAAATTTATTTCAAGAATCTAAAG
ATCTAGCACCTTTAAATCAAGAATCTAAAGATCTAGCACCTTTAAATCAAGAATCTAAAGATCTAGAAACTATACTCTTA
GAATTAGAAGCAATTGGTAAGAAGTTAGAAGCTCAAAAAAAGCAAGAAGACGAAGGAATAGCTAAAATTACTGCCGAACA
ATCTGATTTCCTGGATACTTTTAAAATTGGTCCTCTTGAACTTGTTGTAAAAGAGAATCAAATAGAAATGAAAAGAATAA
TTTACTCATCTTTAAATTACGAAACAAAAAAAATAAAGACATTAGAAGAAATTCTTGAAAAACTTAAAAAAAAATCTACA
AACAATCAAATACTCGGAAGATTTATTCATCACATATCATGGAGTATTCAATTCCGCCTAAACCAACATTTAAAAGTAAT
AAAAGATGAATTGCTTACTCTAAGCCAAAAAGAAGCCGAGGAATTACTAATCAACGTAAAATCCGACTTAATACTAAAAC
AAAGGTTTAAAAAAACCTTAAACGAAACTATTGCGGCTTACAATAAAAATTCAGAAAGCATTAAAACTAATGAGGATAAA
CTAGCAGCCCATATGAATGAAAATTACGAAGAATTTACTTCTTTAAAACCCATCTAA

Upstream 100 bases:

>100_bases
TAAATAATAATCATATTATTTAATAAATAAAATAATATGATTATATTCTCTTTTTATATTAAAATTAATAAATATTAATT
TAATATAAAAGGAGAATATT

Downstream 100 bases:

>100_bases
TACTAAATAAACAAAAAATTAATACGTTGCACTTTATATTTTTTAAAAAAGAGAAGTTAATTCTTCTCTTTTTTTTTTGA
AAAAAAACTTAATTTAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Complement Regulator Acquiring; Crasp-1 Outer Surface Protein; Crasp-1ss Outer Surface Protein; Antigen P; Bbcrasp-1 Protein

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTKTKSDIIKLNIITTILALICISCAPINKIDPKPKKHTNAKEKTQNLFQESKDLAPLNQESKDLAPLNQESKDLETILL
ELEAIGKKLEAQKKQEDEGIAKITAEQSDFLDTFKIGPLELVVKENQIEMKRIIYSSLNYETKKIKTLEEILEKLKKKST
NNQILGRFIHHISWSIQFRLNQHLKVIKDELLTLSQKEAEELLINVKSDLILKQRFKKTLNETIAAYNKNSESIKTNEDK
LAAHMNENYEEFTSLKPI

Sequences:

>Translated_258_residues
MTKTKSDIIKLNIITTILALICISCAPINKIDPKPKKHTNAKEKTQNLFQESKDLAPLNQESKDLAPLNQESKDLETILL
ELEAIGKKLEAQKKQEDEGIAKITAEQSDFLDTFKIGPLELVVKENQIEMKRIIYSSLNYETKKIKTLEEILEKLKKKST
NNQILGRFIHHISWSIQFRLNQHLKVIKDELLTLSQKEAEELLINVKSDLILKQRFKKTLNETIAAYNKNSESIKTNEDK
LAAHMNENYEEFTSLKPI
>Mature_257_residues
TKTKSDIIKLNIITTILALICISCAPINKIDPKPKKHTNAKEKTQNLFQESKDLAPLNQESKDLAPLNQESKDLETILLE
LEAIGKKLEAQKKQEDEGIAKITAEQSDFLDTFKIGPLELVVKENQIEMKRIIYSSLNYETKKIKTLEEILEKLKKKSTN
NQILGRFIHHISWSIQFRLNQHLKVIKDELLTLSQKEAEELLINVKSDLILKQRFKKTLNETIAAYNKNSESIKTNEDKL
AAHMNENYEEFTSLKPI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29697; Mature: 29566

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTKSDIIKLNIITTILALICISCAPINKIDPKPKKHTNAKEKTQNLFQESKDLAPLNQ
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
ESKDLAPLNQESKDLETILLELEAIGKKLEAQKKQEDEGIAKITAEQSDFLDTFKIGPLE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCHHHHHHHHCCCCEE
LVVKENQIEMKRIIYSSLNYETKKIKTLEEILEKLKKKSTNNQILGRFIHHISWSIQFRL
EEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEH
NQHLKVIKDELLTLSQKEAEELLINVKSDLILKQRFKKTLNETIAAYNKNSESIKTNEDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LAAHMNENYEEFTSLKPI
HHHHHCCCHHHHHCCCCC
>Mature Secondary Structure 
TKTKSDIIKLNIITTILALICISCAPINKIDPKPKKHTNAKEKTQNLFQESKDLAPLNQ
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
ESKDLAPLNQESKDLETILLELEAIGKKLEAQKKQEDEGIAKITAEQSDFLDTFKIGPLE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCHHHHHHHHCCCCEE
LVVKENQIEMKRIIYSSLNYETKKIKTLEEILEKLKKKSTNNQILGRFIHHISWSIQFRL
EEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEH
NQHLKVIKDELLTLSQKEAEELLINVKSDLILKQRFKKTLNETIAAYNKNSESIKTNEDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
LAAHMNENYEEFTSLKPI
HHHHHCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA