The gene/protein map for NC_008564 is currently unavailable.
Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

Click here to switch to the map view.

The map label for this gene is 117621635

Identifier: 117621635

GI number: 117621635

Start: 49707

End: 50426

Strand: Reverse

Name: 117621635

Synonym: BAPKO_2064

Alternate gene names: NA

Gene position: 50426-49707 (Counterclockwise)

Preceding gene: 117621636

Following gene: 117621634

Centisome position: 84.1

GC content: 27.78

Gene sequence:

>720_bases
TTGAAAAAAAATGATTTAATATTAACTAATATTGTCATTCCAATACTTCTTTTGTGCTCTTGCAGCTTATTTCAAGGAAC
AATAACTGAAAGAATATCCACAGAAATAAAAAGATTTAAAGAAAAAGTAGAACAATATAAAGACAAAACTGAAGACTCTG
ATCAATTTGGAATGAAATATTCAGTCTTTAATATTGATAAGAGTGCCCTTAAGCTTGCAAAGCTCAACTCAGACTCAAAA
AAAAATGAAAGACTGCTATTTTACTCTTCTCTAGATTACAATAAAGCAAGAATTGTAAACTTTGGGAAAATACTCACACA
ACTTTACAAACAGCAACAATACCATCAACTAATTGAAGAGGTTGTTGAAATAGGATATTTTAGCATTCAAAAAACCCTTG
AAGAGACGATTTTAAAAATATCTGATGATAAAGATGAATTAAAAAATCTGGGCAAAGAAAACCTAAAAACTCTTGAGACT
GCAATAAAAGAACTTTTTAAAATCAAACAAAATTGGATCAAAAAGGTAGACGAGATTATTCTCAACTATAACGAAAATTT
AGAAAAAATTAAAGAAAACGCAAACAGCTTGGCAGAACATATTAGCCATAAAATTAACCCGGAAGAATATGATGCAACAG
CTGAAATTACAAAAATAAAAGAAATATTAAATCCTAATTATAATTTGCCAACTTTAACAATACCTGGAAATCAAAATTAA

Upstream 100 bases:

>100_bases
AAGTTTAAACTTAAACTTTGAATAATTTGATATACATTTGTAATATGTACTAAAAATTATTTTGTATCGCATTATTACAT
TTTTATAAAAGGAGAATATT

Downstream 100 bases:

>100_bases
TATGTTAAAGCTGGTCCATTTTTTTCATATTTATTTAAAATCAAACAATCTAATACATTTTATAAAAGGAGAATACTTTG
AAAAAATACAAATTAGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Antigen

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKKNDLILTNIVIPILLLCSCSLFQGTITERISTEIKRFKEKVEQYKDKTEDSDQFGMKYSVFNIDKSALKLAKLNSDSK
KNERLLFYSSLDYNKARIVNFGKILTQLYKQQQYHQLIEEVVEIGYFSIQKTLEETILKISDDKDELKNLGKENLKTLET
AIKELFKIKQNWIKKVDEIILNYNENLEKIKENANSLAEHISHKINPEEYDATAEITKIKEILNPNYNLPTLTIPGNQN

Sequences:

>Translated_239_residues
MKKNDLILTNIVIPILLLCSCSLFQGTITERISTEIKRFKEKVEQYKDKTEDSDQFGMKYSVFNIDKSALKLAKLNSDSK
KNERLLFYSSLDYNKARIVNFGKILTQLYKQQQYHQLIEEVVEIGYFSIQKTLEETILKISDDKDELKNLGKENLKTLET
AIKELFKIKQNWIKKVDEIILNYNENLEKIKENANSLAEHISHKINPEEYDATAEITKIKEILNPNYNLPTLTIPGNQN
>Mature_239_residues
MKKNDLILTNIVIPILLLCSCSLFQGTITERISTEIKRFKEKVEQYKDKTEDSDQFGMKYSVFNIDKSALKLAKLNSDSK
KNERLLFYSSLDYNKARIVNFGKILTQLYKQQQYHQLIEEVVEIGYFSIQKTLEETILKISDDKDELKNLGKENLKTLET
AIKELFKIKQNWIKKVDEIILNYNENLEKIKENANSLAEHISHKINPEEYDATAEITKIKEILNPNYNLPTLTIPGNQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27854; Mature: 27854

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNDLILTNIVIPILLLCSCSLFQGTITERISTEIKRFKEKVEQYKDKTEDSDQFGMKY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEE
SVFNIDKSALKLAKLNSDSKKNERLLFYSSLDYNKARIVNFGKILTQLYKQQQYHQLIEE
EEEECCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VVEIGYFSIQKTLEETILKISDDKDELKNLGKENLKTLETAIKELFKIKQNWIKKVDEII
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNYNENLEKIKENANSLAEHISHKINPEEYDATAEITKIKEILNPNYNLPTLTIPGNQN
HCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCC
>Mature Secondary Structure
MKKNDLILTNIVIPILLLCSCSLFQGTITERISTEIKRFKEKVEQYKDKTEDSDQFGMKY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEE
SVFNIDKSALKLAKLNSDSKKNERLLFYSSLDYNKARIVNFGKILTQLYKQQQYHQLIEE
EEEECCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VVEIGYFSIQKTLEETILKISDDKDELKNLGKENLKTLETAIKELFKIKQNWIKKVDEII
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNYNENLEKIKENANSLAEHISHKINPEEYDATAEITKIKEILNPNYNLPTLTIPGNQN
HCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA