| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
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The map label for this gene is 117621617
Identifier: 117621617
GI number: 117621617
Start: 35026
End: 35517
Strand: Direct
Name: 117621617
Synonym: BAPKO_2046
Alternate gene names: NA
Gene position: 35026-35517 (Clockwise)
Preceding gene: 117621616
Following gene: 117621618
Centisome position: 58.42
GC content: 31.1
Gene sequence:
>492_bases ATGAGATATAAGTTAAAAATATTAACCAGAGCCAAAACACATACATACATTTTAAAAGATATTCCTATGTATGAGTGGGA CAATGTTTTAGGATTTGATGTTGAGCGAGATGAACTTATTAGCAAGCTTAACGATCTGCAAACATTAAAAGAAATAACTA AATTAATGATCTCAAGGGGATTTTTAGATGAATTTTATGAAATCCTAAACAAAGAGAGAAGATATTCTGAGCTTTATAAG TATGCTCTGCCCACAATTCTTTTTTCAGTTCAGTATTCACTTTTCCAAACAATAGCAGGTTTTAAACAACCCGGTTTAGT TTACATTGAAAGTTATCAAGATAAAAACGGCGATTATATTAAGTACGATTACATTGACAAGCGCTGGAGTTATGATTTTT TAATTACAAATAGCAACTCTTTAGGCGCAAATCAAGAAGATTCTCTAGAAACCGGTCTTGAGTCTTTATTGCAAGAAGGT GTTAATGAATAA
Upstream 100 bases:
>100_bases ATGATACGGTTAAGTTTACAATTCATGCAATCAATTGCGATGTTGAGAAAGCAAGTTAATTGAATAATAAAAATGTTTTA TTAAAGGATAAAAATTTAAA
Downstream 100 bases:
>100_bases GGCAGAGATTGCAACCAATTATTTTAAATACATAGATTATTTGACAAGAGAAGCTAATAAGTACTATTTCCCTATTGTAA TGGGCATTTGCACATACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MRYKLKILTRAKTHTYILKDIPMYEWDNVLGFDVERDELISKLNDLQTLKEITKLMISRGFLDEFYEILNKERRYSELYK YALPTILFSVQYSLFQTIAGFKQPGLVYIESYQDKNGDYIKYDYIDKRWSYDFLITNSNSLGANQEDSLETGLESLLQEG VNE
Sequences:
>Translated_163_residues MRYKLKILTRAKTHTYILKDIPMYEWDNVLGFDVERDELISKLNDLQTLKEITKLMISRGFLDEFYEILNKERRYSELYK YALPTILFSVQYSLFQTIAGFKQPGLVYIESYQDKNGDYIKYDYIDKRWSYDFLITNSNSLGANQEDSLETGLESLLQEG VNE >Mature_163_residues MRYKLKILTRAKTHTYILKDIPMYEWDNVLGFDVERDELISKLNDLQTLKEITKLMISRGFLDEFYEILNKERRYSELYK YALPTILFSVQYSLFQTIAGFKQPGLVYIESYQDKNGDYIKYDYIDKRWSYDFLITNSNSLGANQEDSLETGLESLLQEG VNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19350; Mature: 19350
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYKLKILTRAKTHTYILKDIPMYEWDNVLGFDVERDELISKLNDLQTLKEITKLMISRG CCEEEEEEECCCHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC FLDEFYEILNKERRYSELYKYALPTILFSVQYSLFQTIAGFKQPGLVYIESYQDKNGDYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEE KYDYIDKRWSYDFLITNSNSLGANQEDSLETGLESLLQEGVNE EEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRYKLKILTRAKTHTYILKDIPMYEWDNVLGFDVERDELISKLNDLQTLKEITKLMISRG CCEEEEEEECCCHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC FLDEFYEILNKERRYSELYKYALPTILFSVQYSLFQTIAGFKQPGLVYIESYQDKNGDYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEE KYDYIDKRWSYDFLITNSNSLGANQEDSLETGLESLLQEGVNE EEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA