Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

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The map label for this gene is 117621616

Identifier: 117621616

GI number: 117621616

Start: 34562

End: 34984

Strand: Direct

Name: 117621616

Synonym: BAPKO_2045

Alternate gene names: NA

Gene position: 34562-34984 (Clockwise)

Preceding gene: 117621615

Following gene: 117621617

Centisome position: 57.64

GC content: 31.21

Gene sequence:

>423_bases
ATGAAAGAATATTATTCATTAGATTTAATATTTTTTAGCTTTAATGACAATTTAATAGACAGAGGTATTCTTGAGTACAG
TACAGAGCCTAATATAATGGCCAAGGCAAGCACAGAAGACAGAAATTTTCCAATTCCAAGCTTTAGAGATCCAAGAACCG
TTGTGCATATTTTTGATTTAGAGGTAAGCAAAGGATCTTTTGATTACAAGCTCTTAACAAAGCTAAGCAATGAGCAATTT
TACGGGAATTTATCAAAAGCTCAAAAGTTAAAAAGATTAGTGTTTAACGATCAAATGGGATTAAAAATCATTTCAAATAG
TGCATTTTTTGCAGAAATCCCAACTAGAAAGTATTCAGCTGACAATGATACGGTTAAGTTTACAATTCATGCAATCAATT
GCGATGTTGAGAAAGCAAGTTAA

Upstream 100 bases:

>100_bases
TAAGCTTAGAAGTTGCGCTTAAGTATAATGACAGCTTTAATAGTGTTAATTTAATAATCACTGCACAAGAGATAAATGAA
TATTTAAGGAGAGCATCATA

Downstream 100 bases:

>100_bases
TTGAATAATAAAAATGTTTTATTAAAGGATAAAAATTTAAAATGAGATATAAGTTAAAAATATTAACCAGAGCCAAAACA
CATACATACATTTTAAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MKEYYSLDLIFFSFNDNLIDRGILEYSTEPNIMAKASTEDRNFPIPSFRDPRTVVHIFDLEVSKGSFDYKLLTKLSNEQF
YGNLSKAQKLKRLVFNDQMGLKIISNSAFFAEIPTRKYSADNDTVKFTIHAINCDVEKAS

Sequences:

>Translated_140_residues
MKEYYSLDLIFFSFNDNLIDRGILEYSTEPNIMAKASTEDRNFPIPSFRDPRTVVHIFDLEVSKGSFDYKLLTKLSNEQF
YGNLSKAQKLKRLVFNDQMGLKIISNSAFFAEIPTRKYSADNDTVKFTIHAINCDVEKAS
>Mature_140_residues
MKEYYSLDLIFFSFNDNLIDRGILEYSTEPNIMAKASTEDRNFPIPSFRDPRTVVHIFDLEVSKGSFDYKLLTKLSNEQF
YGNLSKAQKLKRLVFNDQMGLKIISNSAFFAEIPTRKYSADNDTVKFTIHAINCDVEKAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16153; Mature: 16153

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEYYSLDLIFFSFNDNLIDRGILEYSTEPNIMAKASTEDRNFPIPSFRDPRTVVHIFDL
CCCEEEEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEE
EVSKGSFDYKLLTKLSNEQFYGNLSKAQKLKRLVFNDQMGLKIISNSAFFAEIPTRKYSA
EECCCCCCEEEEEECCCCCEECCHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCEECC
DNDTVKFTIHAINCDVEKAS
CCCEEEEEEEEEEEEEECCC
>Mature Secondary Structure
MKEYYSLDLIFFSFNDNLIDRGILEYSTEPNIMAKASTEDRNFPIPSFRDPRTVVHIFDL
CCCEEEEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEE
EVSKGSFDYKLLTKLSNEQFYGNLSKAQKLKRLVFNDQMGLKIISNSAFFAEIPTRKYSA
EECCCCCCEEEEEECCCCCEECCHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCEECC
DNDTVKFTIHAINCDVEKAS
CCCEEEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA