| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
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The map label for this gene is 117621616
Identifier: 117621616
GI number: 117621616
Start: 34562
End: 34984
Strand: Direct
Name: 117621616
Synonym: BAPKO_2045
Alternate gene names: NA
Gene position: 34562-34984 (Clockwise)
Preceding gene: 117621615
Following gene: 117621617
Centisome position: 57.64
GC content: 31.21
Gene sequence:
>423_bases ATGAAAGAATATTATTCATTAGATTTAATATTTTTTAGCTTTAATGACAATTTAATAGACAGAGGTATTCTTGAGTACAG TACAGAGCCTAATATAATGGCCAAGGCAAGCACAGAAGACAGAAATTTTCCAATTCCAAGCTTTAGAGATCCAAGAACCG TTGTGCATATTTTTGATTTAGAGGTAAGCAAAGGATCTTTTGATTACAAGCTCTTAACAAAGCTAAGCAATGAGCAATTT TACGGGAATTTATCAAAAGCTCAAAAGTTAAAAAGATTAGTGTTTAACGATCAAATGGGATTAAAAATCATTTCAAATAG TGCATTTTTTGCAGAAATCCCAACTAGAAAGTATTCAGCTGACAATGATACGGTTAAGTTTACAATTCATGCAATCAATT GCGATGTTGAGAAAGCAAGTTAA
Upstream 100 bases:
>100_bases TAAGCTTAGAAGTTGCGCTTAAGTATAATGACAGCTTTAATAGTGTTAATTTAATAATCACTGCACAAGAGATAAATGAA TATTTAAGGAGAGCATCATA
Downstream 100 bases:
>100_bases TTGAATAATAAAAATGTTTTATTAAAGGATAAAAATTTAAAATGAGATATAAGTTAAAAATATTAACCAGAGCCAAAACA CATACATACATTTTAAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKEYYSLDLIFFSFNDNLIDRGILEYSTEPNIMAKASTEDRNFPIPSFRDPRTVVHIFDLEVSKGSFDYKLLTKLSNEQF YGNLSKAQKLKRLVFNDQMGLKIISNSAFFAEIPTRKYSADNDTVKFTIHAINCDVEKAS
Sequences:
>Translated_140_residues MKEYYSLDLIFFSFNDNLIDRGILEYSTEPNIMAKASTEDRNFPIPSFRDPRTVVHIFDLEVSKGSFDYKLLTKLSNEQF YGNLSKAQKLKRLVFNDQMGLKIISNSAFFAEIPTRKYSADNDTVKFTIHAINCDVEKAS >Mature_140_residues MKEYYSLDLIFFSFNDNLIDRGILEYSTEPNIMAKASTEDRNFPIPSFRDPRTVVHIFDLEVSKGSFDYKLLTKLSNEQF YGNLSKAQKLKRLVFNDQMGLKIISNSAFFAEIPTRKYSADNDTVKFTIHAINCDVEKAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16153; Mature: 16153
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEYYSLDLIFFSFNDNLIDRGILEYSTEPNIMAKASTEDRNFPIPSFRDPRTVVHIFDL CCCEEEEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEE EVSKGSFDYKLLTKLSNEQFYGNLSKAQKLKRLVFNDQMGLKIISNSAFFAEIPTRKYSA EECCCCCCEEEEEECCCCCEECCHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCEECC DNDTVKFTIHAINCDVEKAS CCCEEEEEEEEEEEEEECCC >Mature Secondary Structure MKEYYSLDLIFFSFNDNLIDRGILEYSTEPNIMAKASTEDRNFPIPSFRDPRTVVHIFDL CCCEEEEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEE EVSKGSFDYKLLTKLSNEQFYGNLSKAQKLKRLVFNDQMGLKIISNSAFFAEIPTRKYSA EECCCCCCEEEEEECCCCCEECCHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCEECC DNDTVKFTIHAINCDVEKAS CCCEEEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA