The gene/protein map for NC_008564 is currently unavailable.
Definition Borrelia afzelii PKo plasmid lp60, complete sequence.
Accession NC_008564
Length 59,958

Click here to switch to the map view.

The map label for this gene is 117621611

Identifier: 117621611

GI number: 117621611

Start: 31706

End: 32161

Strand: Direct

Name: 117621611

Synonym: BAPKO_2040

Alternate gene names: NA

Gene position: 31706-32161 (Clockwise)

Preceding gene: 117621610

Following gene: 117621612

Centisome position: 52.88

GC content: 27.19

Gene sequence:

>456_bases
ATGAATGAAAGCAAAATCGATACTGATCAGGTTCTCAGCACAAAGTTAAAAACTCTAGATAGCGAAAATCTAAGCCCAGC
TTTACAAACAGTATATGAGCAAATACTTGAGCTTTTAATGCTTGACTTTAAAGATCTAAGCATTAAAGAATTTTCTTTGT
ATTTAAATTTACTTGAAAATATTTTAATTCTTAAGCGAATAAGAATTAAAAGCTTAAATGATTCTACAATGTTTGTTTTA
ATTTATTATTTTATTGGCTGTGAGTTAAAAAAACGAAACAGATTAAAAGGTTTTAATTTAAATAGCATCAAGTCTGAAAA
ATTTAAAGAGATATCATTAGAATATTTTCCCACAACGCTTAGTGGTAAAAGTTGTGGGGGGGATTTTTGTGAATATTTAG
ATAGTTTAATAGAAGAGTTAAGAGTAAAAGACTCTTTAATAGGAGTAGTTAAGTGA

Upstream 100 bases:

>100_bases
AAATCTCAAGCAGCAATTTTAGAACAAGTTTTCTTGACTTTTCTATTGGAACAATTTTGGCAACAAAAAATTCAATCCTT
AGAATAAAATTGAGCTAAAA

Downstream 100 bases:

>100_bases
AGTCTTTAGAAATGAAATCTTTAGAGATGATTAATTTGGGTTTAAGTAATATTATAAAAACATATTCACAAGATCTTTTT
TTTTGTAAATTTAGAACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MNESKIDTDQVLSTKLKTLDSENLSPALQTVYEQILELLMLDFKDLSIKEFSLYLNLLENILILKRIRIKSLNDSTMFVL
IYYFIGCELKKRNRLKGFNLNSIKSEKFKEISLEYFPTTLSGKSCGGDFCEYLDSLIEELRVKDSLIGVVK

Sequences:

>Translated_151_residues
MNESKIDTDQVLSTKLKTLDSENLSPALQTVYEQILELLMLDFKDLSIKEFSLYLNLLENILILKRIRIKSLNDSTMFVL
IYYFIGCELKKRNRLKGFNLNSIKSEKFKEISLEYFPTTLSGKSCGGDFCEYLDSLIEELRVKDSLIGVVK
>Mature_151_residues
MNESKIDTDQVLSTKLKTLDSENLSPALQTVYEQILELLMLDFKDLSIKEFSLYLNLLENILILKRIRIKSLNDSTMFVL
IYYFIGCELKKRNRLKGFNLNSIKSEKFKEISLEYFPTTLSGKSCGGDFCEYLDSLIEELRVKDSLIGVVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17464; Mature: 17464

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNESKIDTDQVLSTKLKTLDSENLSPALQTVYEQILELLMLDFKDLSIKEFSLYLNLLEN
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ILILKRIRIKSLNDSTMFVLIYYFIGCELKKRNRLKGFNLNSIKSEKFKEISLEYFPTTL
HHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
SGKSCGGDFCEYLDSLIEELRVKDSLIGVVK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNESKIDTDQVLSTKLKTLDSENLSPALQTVYEQILELLMLDFKDLSIKEFSLYLNLLEN
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ILILKRIRIKSLNDSTMFVLIYYFIGCELKKRNRLKGFNLNSIKSEKFKEISLEYFPTTL
HHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
SGKSCGGDFCEYLDSLIEELRVKDSLIGVVK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA