| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
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The map label for this gene is 117621611
Identifier: 117621611
GI number: 117621611
Start: 31706
End: 32161
Strand: Direct
Name: 117621611
Synonym: BAPKO_2040
Alternate gene names: NA
Gene position: 31706-32161 (Clockwise)
Preceding gene: 117621610
Following gene: 117621612
Centisome position: 52.88
GC content: 27.19
Gene sequence:
>456_bases ATGAATGAAAGCAAAATCGATACTGATCAGGTTCTCAGCACAAAGTTAAAAACTCTAGATAGCGAAAATCTAAGCCCAGC TTTACAAACAGTATATGAGCAAATACTTGAGCTTTTAATGCTTGACTTTAAAGATCTAAGCATTAAAGAATTTTCTTTGT ATTTAAATTTACTTGAAAATATTTTAATTCTTAAGCGAATAAGAATTAAAAGCTTAAATGATTCTACAATGTTTGTTTTA ATTTATTATTTTATTGGCTGTGAGTTAAAAAAACGAAACAGATTAAAAGGTTTTAATTTAAATAGCATCAAGTCTGAAAA ATTTAAAGAGATATCATTAGAATATTTTCCCACAACGCTTAGTGGTAAAAGTTGTGGGGGGGATTTTTGTGAATATTTAG ATAGTTTAATAGAAGAGTTAAGAGTAAAAGACTCTTTAATAGGAGTAGTTAAGTGA
Upstream 100 bases:
>100_bases AAATCTCAAGCAGCAATTTTAGAACAAGTTTTCTTGACTTTTCTATTGGAACAATTTTGGCAACAAAAAATTCAATCCTT AGAATAAAATTGAGCTAAAA
Downstream 100 bases:
>100_bases AGTCTTTAGAAATGAAATCTTTAGAGATGATTAATTTGGGTTTAAGTAATATTATAAAAACATATTCACAAGATCTTTTT TTTTGTAAATTTAGAACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MNESKIDTDQVLSTKLKTLDSENLSPALQTVYEQILELLMLDFKDLSIKEFSLYLNLLENILILKRIRIKSLNDSTMFVL IYYFIGCELKKRNRLKGFNLNSIKSEKFKEISLEYFPTTLSGKSCGGDFCEYLDSLIEELRVKDSLIGVVK
Sequences:
>Translated_151_residues MNESKIDTDQVLSTKLKTLDSENLSPALQTVYEQILELLMLDFKDLSIKEFSLYLNLLENILILKRIRIKSLNDSTMFVL IYYFIGCELKKRNRLKGFNLNSIKSEKFKEISLEYFPTTLSGKSCGGDFCEYLDSLIEELRVKDSLIGVVK >Mature_151_residues MNESKIDTDQVLSTKLKTLDSENLSPALQTVYEQILELLMLDFKDLSIKEFSLYLNLLENILILKRIRIKSLNDSTMFVL IYYFIGCELKKRNRLKGFNLNSIKSEKFKEISLEYFPTTLSGKSCGGDFCEYLDSLIEELRVKDSLIGVVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17464; Mature: 17464
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNESKIDTDQVLSTKLKTLDSENLSPALQTVYEQILELLMLDFKDLSIKEFSLYLNLLEN CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ILILKRIRIKSLNDSTMFVLIYYFIGCELKKRNRLKGFNLNSIKSEKFKEISLEYFPTTL HHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC SGKSCGGDFCEYLDSLIEELRVKDSLIGVVK CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNESKIDTDQVLSTKLKTLDSENLSPALQTVYEQILELLMLDFKDLSIKEFSLYLNLLEN CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH ILILKRIRIKSLNDSTMFVLIYYFIGCELKKRNRLKGFNLNSIKSEKFKEISLEYFPTTL HHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC SGKSCGGDFCEYLDSLIEELRVKDSLIGVVK CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA