| Definition | Borrelia afzelii PKo plasmid lp60, complete sequence. |
|---|---|
| Accession | NC_008564 |
| Length | 59,958 |
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The map label for this gene is 117621612
Identifier: 117621612
GI number: 117621612
Start: 32158
End: 32547
Strand: Direct
Name: 117621612
Synonym: BAPKO_2041
Alternate gene names: NA
Gene position: 32158-32547 (Clockwise)
Preceding gene: 117621611
Following gene: 117621613
Centisome position: 53.63
GC content: 28.97
Gene sequence:
>390_bases GTGAAGTCTTTAGAAATGAAATCTTTAGAGATGATTAATTTGGGTTTAAGTAATATTATAAAAACATATTCACAAGATCT TTTTTTTTGTAAATTTAGAACAATCAAAGATCCAATAAACGCATCTTATGAAACCAGATTTCAAAGTTCTGATACTGTTG TTTTTAAAGGCATGTTTTTATTAATAAGTCCAGAAGAAGTAGTTGAGATTGAAGGTGTAAATATTTTTGACAAAAATAGT TATGCCAAGGTGTATACTCTTGAGAATTTTGAATTTGAGTGTGGAGATTTGATTAAGGCCCATGATGATTTTTATTCGAT CTTAGGGGTTCAAAAGAGCTACAAAGAAGGTTTAAATTACAACACGCTAGTTTTAAGGAGTTCTTGTTGA
Upstream 100 bases:
>100_bases CAACGCTTAGTGGTAAAAGTTGTGGGGGGGATTTTTGTGAATATTTAGATAGTTTAATAGAAGAGTTAAGAGTAAAAGAC TCTTTAATAGGAGTAGTTAA
Downstream 100 bases:
>100_bases GTATAAAAATTAGATTTAAAGACATTTATTCTTTTAACACAGAAAATAGTGTTAATATTAAATCGGAAGAACTTGAGAAA GAGATTACTTTTAAATTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MKSLEMKSLEMINLGLSNIIKTYSQDLFFCKFRTIKDPINASYETRFQSSDTVVFKGMFLLISPEEVVEIEGVNIFDKNS YAKVYTLENFEFECGDLIKAHDDFYSILGVQKSYKEGLNYNTLVLRSSC
Sequences:
>Translated_129_residues MKSLEMKSLEMINLGLSNIIKTYSQDLFFCKFRTIKDPINASYETRFQSSDTVVFKGMFLLISPEEVVEIEGVNIFDKNS YAKVYTLENFEFECGDLIKAHDDFYSILGVQKSYKEGLNYNTLVLRSSC >Mature_129_residues MKSLEMKSLEMINLGLSNIIKTYSQDLFFCKFRTIKDPINASYETRFQSSDTVVFKGMFLLISPEEVVEIEGVNIFDKNS YAKVYTLENFEFECGDLIKAHDDFYSILGVQKSYKEGLNYNTLVLRSSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14889; Mature: 14889
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLEMKSLEMINLGLSNIIKTYSQDLFFCKFRTIKDPINASYETRFQSSDTVVFKGMFL CCCCCCCCHHHHHCCHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEEE LISPEEVVEIEGVNIFDKNSYAKVYTLENFEFECGDLIKAHDDFYSILGVQKSYKEGLNY EECCHHHEEECCCEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCC NTLVLRSSC EEEEEEECC >Mature Secondary Structure MKSLEMKSLEMINLGLSNIIKTYSQDLFFCKFRTIKDPINASYETRFQSSDTVVFKGMFL CCCCCCCCHHHHHCCHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEEE LISPEEVVEIEGVNIFDKNSYAKVYTLENFEFECGDLIKAHDDFYSILGVQKSYKEGLNY EECCHHHEEECCCEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCC NTLVLRSSC EEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA