| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116874175
Identifier: 116874175
GI number: 116874175
Start: 2792124
End: 2792723
Strand: Direct
Name: 116874175
Synonym: lwe2759
Alternate gene names: NA
Gene position: 2792124-2792723 (Clockwise)
Preceding gene: 116874167
Following gene: 116874187
Centisome position: 99.22
GC content: 37.67
Gene sequence:
>600_bases ATGACTAATACATTTTTAGATTCTATTAAAGTTCGTCGTTCCATTTATGCACTAGATAAAAACGTTTCTGTAGAGGATTC CAAAATTGAAGAACTTATTAAAGACGCTGTTAAATATAGCCCATCATCTTTCAACTCACAAAGTTCTCGTGCAGTTATTC TTTTAGGAGAAAACCATGATAAACTGTGGAATATCGTAGTGGATACATTACGCGCTATCGTACCTGCTGAAAATTTTGCA GCTACTGAAGAAAAAGTTGGTTCTTTCCGCGCTGGATACGGAACAGTTCTTTTCTTTGAAGATAATGCTGTTATCGAAGG CTTGCAAGAAAATTTTGCATTATACGCTGATAACTTCCCTATATGGTCTGAACAATCTTCAGGTATAGCACAACATTCCG TATGGGTTGCTCTTGCAAACGCTGGAATCGGTGCATCTCTTCAACATTATAACCCACTAATTGATGATGCTGTTAAAGCT GAATGGAATATCCCTGCAAGCTGGAATTTACGCGCTCAAATGCCATTTGGTAATATCGTACAAGAAGCTGGCGAAAAAGA ATTCATTGATGACGCTGATCGTTTCCGCGTTTTCAAATAA
Upstream 100 bases:
>100_bases AGCGCTTACATTTTTCTTTTCCGACAAAAACACTTGCAAATTAATTAATAGTTGCTATACTTATGTAAGTAAATAACATT AAAAAAGGAGTTTTATTATT
Downstream 100 bases:
>100_bases AAATGTTTCACGTGAAACAAAAAATTCCGCGACCATTAAATGGTTTCGCGGAATTTTTATTTTGCTAAACTTTTGAATCT GCTTCTGAGTTCATCACAAC
Product: nitroreductase family protein
Products: NA
Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; Oxidoreductase Related Nitroreductase; Oxidoreductase Related Nitroreductase-Like Protein; Oxydoreductase Related Nitroreductase; Ypothetical Protein SMU.; Oxidoreductase/Nitroreductase
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MTNTFLDSIKVRRSIYALDKNVSVEDSKIEELIKDAVKYSPSSFNSQSSRAVILLGENHDKLWNIVVDTLRAIVPAENFA ATEEKVGSFRAGYGTVLFFEDNAVIEGLQENFALYADNFPIWSEQSSGIAQHSVWVALANAGIGASLQHYNPLIDDAVKA EWNIPASWNLRAQMPFGNIVQEAGEKEFIDDADRFRVFK
Sequences:
>Translated_199_residues MTNTFLDSIKVRRSIYALDKNVSVEDSKIEELIKDAVKYSPSSFNSQSSRAVILLGENHDKLWNIVVDTLRAIVPAENFA ATEEKVGSFRAGYGTVLFFEDNAVIEGLQENFALYADNFPIWSEQSSGIAQHSVWVALANAGIGASLQHYNPLIDDAVKA EWNIPASWNLRAQMPFGNIVQEAGEKEFIDDADRFRVFK >Mature_198_residues TNTFLDSIKVRRSIYALDKNVSVEDSKIEELIKDAVKYSPSSFNSQSSRAVILLGENHDKLWNIVVDTLRAIVPAENFAA TEEKVGSFRAGYGTVLFFEDNAVIEGLQENFALYADNFPIWSEQSSGIAQHSVWVALANAGIGASLQHYNPLIDDAVKAE WNIPASWNLRAQMPFGNIVQEAGEKEFIDDADRFRVFK
Specific function: Unknown
COG id: COG3560
COG function: function code R; Predicted oxidoreductase related to nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6319823, Length=195, Percent_Identity=31.2820512820513, Blast_Score=103, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22234; Mature: 22103
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTFLDSIKVRRSIYALDKNVSVEDSKIEELIKDAVKYSPSSFNSQSSRAVILLGENHD CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCH KLWNIVVDTLRAIVPAENFAATEEKVGSFRAGYGTVLFFEDNAVIEGLQENFALYADNFP HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCEEEEECCCC IWSEQSSGIAQHSVWVALANAGIGASLQHYNPLIDDAVKAEWNIPASWNLRAQMPFGNIV CCCCCCCCCHHHHEEEEEECCCCCCCHHHCCCHHHHHHHCCCCCCCCCCEEEECCCHHHH QEAGEKEFIDDADRFRVFK HHCCCCCCCCCCCCEEECC >Mature Secondary Structure TNTFLDSIKVRRSIYALDKNVSVEDSKIEELIKDAVKYSPSSFNSQSSRAVILLGENHD CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCH KLWNIVVDTLRAIVPAENFAATEEKVGSFRAGYGTVLFFEDNAVIEGLQENFALYADNFP HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHCEEEEECCCC IWSEQSSGIAQHSVWVALANAGIGASLQHYNPLIDDAVKAEWNIPASWNLRAQMPFGNIV CCCCCCCCCHHHHEEEEEECCCCCCCHHHCCCHHHHHHHCCCCCCCCCCEEEECCCHHHH QEAGEKEFIDDADRFRVFK HHCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA