| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is fabG [H]
Identifier: 116874167
GI number: 116874167
Start: 2784790
End: 2785521
Strand: Direct
Name: fabG [H]
Synonym: lwe2751
Alternate gene names: 116874167
Gene position: 2784790-2785521 (Clockwise)
Preceding gene: 116874166
Following gene: 116874175
Centisome position: 98.96
GC content: 40.57
Gene sequence:
>732_bases ATGACAAATAAGCGTGTTGCATTTATTTTAGGGGGATCTGGTGGCATTGGTAAAGCAGTTGTCGAGAAATTAATTGAACA AGATTATGCGGTTGCTGTTCATTATGCAGGAAATAAAACAAAAGCAGATACACTTGTTGAAACTCTAGTAGCCTCTGGTG GCAAAGCGATTAGTGTTGGTGGTGATGTCGCAGATGAAAATCAAATGATTAGCGCGTTTGACGTTATTGAGGCTCATTTT GGTGGGGTTGATGTCGTTATTAATACTGCTGGTATTATGAAACTAAGTCTCATTACTAGTTTGGATATGGAAGATTTTGA CCTTATTCAAAGAACTAATGTCCGCGGAACTTTTGTTGTTTCCAAACATGCTGCCCTTAGAGTTCGAAAAGGAGGTGCGA TTATCAATTTTTCCACATCAGTAACCCGAACTAATTTTCCTGCATACGGGGCTTATGTTGCTAGTAAAGCCGCGGTTGAA TCGCTCACATTAATTTTGGCGCGCGAACTTCGCGGAAAAGATATTACCGTTAACACAGTCGCACCTGGTCCAACTGCTAC ACCTTTATTTTTATCTGGCAAAGATGATAAAACAATTGAAAGTTTAGCAAATGCAGTGCCGCTTGAACGTCTAGGACAAC CTAGTGATATAGCAGAAACCGTTGCTTTTTTAGCGGGACCAGCACGCTGGGTTAACGGACAAATAATTTTTACCAACGGA GGATTAGCTTAA
Upstream 100 bases:
>100_bases CAAATCCTTGACAAAGTAACCAAAAGGAGTATACTTCCATATATAAAGTTACTTAAATCAAAAAAAGTAACTAATTTGCA TTTGAAGGAGCGAATAATTT
Downstream 100 bases:
>100_bases AGTAAGAATGAAAAAGAGGCAAACAACATATAGCTGTTTGCCTCTTTTAATTACTCTTCTATTTGAATTGAAACCCCTAC ATCTAATAATTCCTCGACAG
Product: 3-ketoacyl-(acyl-carrier-protein) reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTNKRVAFILGGSGGIGKAVVEKLIEQDYAVAVHYAGNKTKADTLVETLVASGGKAISVGGDVADENQMISAFDVIEAHF GGVDVVINTAGIMKLSLITSLDMEDFDLIQRTNVRGTFVVSKHAALRVRKGGAIINFSTSVTRTNFPAYGAYVASKAAVE SLTLILARELRGKDITVNTVAPGPTATPLFLSGKDDKTIESLANAVPLERLGQPSDIAETVAFLAGPARWVNGQIIFTNG GLA
Sequences:
>Translated_243_residues MTNKRVAFILGGSGGIGKAVVEKLIEQDYAVAVHYAGNKTKADTLVETLVASGGKAISVGGDVADENQMISAFDVIEAHF GGVDVVINTAGIMKLSLITSLDMEDFDLIQRTNVRGTFVVSKHAALRVRKGGAIINFSTSVTRTNFPAYGAYVASKAAVE SLTLILARELRGKDITVNTVAPGPTATPLFLSGKDDKTIESLANAVPLERLGQPSDIAETVAFLAGPARWVNGQIIFTNG GLA >Mature_242_residues TNKRVAFILGGSGGIGKAVVEKLIEQDYAVAVHYAGNKTKADTLVETLVASGGKAISVGGDVADENQMISAFDVIEAHFG GVDVVINTAGIMKLSLITSLDMEDFDLIQRTNVRGTFVVSKHAALRVRKGGAIINFSTSVTRTNFPAYGAYVASKAAVES LTLILARELRGKDITVNTVAPGPTATPLFLSGKDDKTIESLANAVPLERLGQPSDIAETVAFLAGPARWVNGQIIFTNGG LA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=32.3770491803279, Blast_Score=106, Evalue=1e-23, Organism=Homo sapiens, GI15277342, Length=249, Percent_Identity=30.9236947791165, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI4758504, Length=256, Percent_Identity=31.25, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI10190704, Length=247, Percent_Identity=28.3400809716599, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI19923817, Length=248, Percent_Identity=28.2258064516129, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=28.2258064516129, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI4504505, Length=190, Percent_Identity=32.1052631578947, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI5031737, Length=248, Percent_Identity=30.241935483871, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI83715985, Length=257, Percent_Identity=29.9610894941634, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI40254986, Length=185, Percent_Identity=31.3513513513514, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI109715829, Length=242, Percent_Identity=28.9256198347107, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI59889578, Length=205, Percent_Identity=29.2682926829268, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI2367175, Length=244, Percent_Identity=32.7868852459016, Blast_Score=130, Evalue=7e-32, Organism=Escherichia coli, GI1787335, Length=241, Percent_Identity=33.195020746888, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI1788459, Length=243, Percent_Identity=30.8641975308642, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI2367365, Length=239, Percent_Identity=32.2175732217573, Blast_Score=95, Evalue=3e-21, Organism=Escherichia coli, GI1789378, Length=226, Percent_Identity=31.858407079646, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1790717, Length=206, Percent_Identity=28.6407766990291, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1789208, Length=243, Percent_Identity=27.5720164609054, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI87082160, Length=254, Percent_Identity=28.3464566929134, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1787905, Length=240, Percent_Identity=30.4166666666667, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1786812, Length=192, Percent_Identity=31.7708333333333, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI87082100, Length=232, Percent_Identity=27.5862068965517, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1789057, Length=254, Percent_Identity=27.1653543307087, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17538182, Length=256, Percent_Identity=32.03125, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=28.8617886178862, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=28.0487804878049, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17561402, Length=247, Percent_Identity=28.3400809716599, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17562906, Length=259, Percent_Identity=27.7992277992278, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71994600, Length=249, Percent_Identity=28.1124497991968, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17544670, Length=257, Percent_Identity=26.4591439688716, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17561272, Length=204, Percent_Identity=27.9411764705882, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI25147288, Length=246, Percent_Identity=26.8292682926829, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=27.0916334661355, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=27.7566539923954, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71982365, Length=189, Percent_Identity=30.1587301587302, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17536025, Length=246, Percent_Identity=26.8292682926829, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17536651, Length=249, Percent_Identity=27.3092369477912, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17558628, Length=188, Percent_Identity=29.7872340425532, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17562910, Length=256, Percent_Identity=26.953125, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17531453, Length=260, Percent_Identity=26.1538461538462, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17568967, Length=194, Percent_Identity=29.8969072164948, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193204405, Length=256, Percent_Identity=27.34375, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17508651, Length=249, Percent_Identity=28.5140562248996, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17562908, Length=256, Percent_Identity=27.34375, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17560150, Length=252, Percent_Identity=26.5873015873016, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=246, Percent_Identity=27.2357723577236, Blast_Score=65, Evalue=9e-12, Organism=Drosophila melanogaster, GI24639444, Length=243, Percent_Identity=31.2757201646091, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI21357041, Length=228, Percent_Identity=32.0175438596491, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI23397609, Length=248, Percent_Identity=29.8387096774194, Blast_Score=88, Evalue=5e-18, Organism=Drosophila melanogaster, GI17737361, Length=258, Percent_Identity=30.2325581395349, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI24644339, Length=227, Percent_Identity=30.3964757709251, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI21357673, Length=188, Percent_Identity=34.0425531914894, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI28571526, Length=245, Percent_Identity=30.2040816326531, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24644337, Length=206, Percent_Identity=28.6407766990291, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24643142, Length=218, Percent_Identity=27.9816513761468, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI21355319, Length=247, Percent_Identity=26.7206477732794, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI28571387, Length=233, Percent_Identity=29.6137339055794, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24648693, Length=232, Percent_Identity=27.1551724137931, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355889, Length=232, Percent_Identity=27.1551724137931, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 25462; Mature: 25331
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKRVAFILGGSGGIGKAVVEKLIEQDYAVAVHYAGNKTKADTLVETLVASGGKAISVG CCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEC GDVADENQMISAFDVIEAHFGGVDVVINTAGIMKLSLITSLDMEDFDLIQRTNVRGTFVV CCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHCCCCHHHHHHHCCCCEEEEE SKHAALRVRKGGAIINFSTSVTRTNFPAYGAYVASKAAVESLTLILARELRGKDITVNTV ECCEEEEEECCCEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE APGPTATPLFLSGKDDKTIESLANAVPLERLGQPSDIAETVAFLAGPARWVNGQIIFTNG CCCCCCCEEEEECCCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCCEEECCEEEEECC GLA CCC >Mature Secondary Structure TNKRVAFILGGSGGIGKAVVEKLIEQDYAVAVHYAGNKTKADTLVETLVASGGKAISVG CCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEC GDVADENQMISAFDVIEAHFGGVDVVINTAGIMKLSLITSLDMEDFDLIQRTNVRGTFVV CCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHCCCCHHHHHHHCCCCEEEEE SKHAALRVRKGGAIINFSTSVTRTNFPAYGAYVASKAAVESLTLILARELRGKDITVNTV ECCEEEEEECCCEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE APGPTATPLFLSGKDDKTIESLANAVPLERLGQPSDIAETVAFLAGPARWVNGQIIFTNG CCCCCCCEEEEECCCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCCEEECCEEEEECC GLA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA