| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116874008
Identifier: 116874008
GI number: 116874008
Start: 2620915
End: 2622246
Strand: Direct
Name: 116874008
Synonym: lwe2592
Alternate gene names: NA
Gene position: 2620915-2622246 (Clockwise)
Preceding gene: 116874007
Following gene: 116874038
Centisome position: 93.13
GC content: 35.21
Gene sequence:
>1332_bases GTGATTCAATTTTTAAAATTTGTCATACTTCTCCTTATATCTTCTTCTTTATTTGGGTGCAGTTCAACAAGCGACAAGAC AGAAAAAATTACCGCTCCCATTGAAAAAGATCAAGATTTATCCATAATTGAAACAACAGATGTTCATTATTTTGCACCGT CTTTAACTGATAATGGAGCAGCTTTTAAACAATATGTTGCAGCTGGCGATGGAAAACAACTAGCTTATAGTGATGAAATA ACTGATGCTTTTTTAGAGGATGTGGAAGCGAAGAAAACCGATGTTTTAATTATTAGCGGTGATTTAACTAACAATGGAGA AAAAACGAGCCACGAAGAACTAGCGAAAAAATTAGCTCAAGTGGAAAAAGCAGGCACACAAGTGTTTGTTGTCCCTGGTA ATCATGATATTAATAATCCTTGGGCACGTAAATTTGAAAAAGATAAACAATTACCGACTGACACTATTACACCAACAGAT TTTAGTAAAATTTACGGAGATTTTGGCTACAAGGACGCTATTTCAAGTGATGATTTTTCGCTAAGTTATTTAGCCGCTCC ATCTTCCAAAGTTTGGTTGCTCATGCTCGACACAGCCATTTATAAAACAAATATGCAACAAGGTACACCTACAACAGAGG GTGGTTTAACGACTGGAACACTCGATTGGGTGAAAGAATGTAGCACACTTGCGGAGAAAAATGGTGCAAAACTTATCCCA GTAATGCATCATAATTTAACTAATCATAGTGATGTGATTCAACGAGGCTTTACTATTAACTATAATCAACAAGTAATTGA TACACTTACAGCTGGGAATATGGAATTTTCTCTTAGCGGACATATCCACACTCAAAACATCCGCACAGCTAAAAGCACGG ATGGCAAAGAAATCACTGATATCGTAACAAATGCGCTTTCTGTTTATCCACATAAATACGGTAATATAACTTATAGCGCT AAAAATAAAAACTTCACTTATCAATCACAAAAGCTCGATATAGAAAGTTGGGCAAAAGAGCACGGGAAAACCGATAAAAA CCTGCTTAATTTTGATCAATTTGATTATGATACTTTTTATAATAGTGGCTATGATAAAGCAATAATGGATTTAATGACAA GTGATGCTTACAAAACCTACAGTCAATCAGATAAAGAAAAAATGGCAGATACAATGGGCTTAAATAACATGTATTTCTTC GCCGGAACTGCACCTCCAAAATCTGCAGGAATGGCTTTATGGGATTCTGCGCCTAATTCATTTTTGAAAGACTATGTCTT AAGTACTTCTAATCCACCTAAAAATAGTAATGACTATTATGTGAGCCCTTAA
Upstream 100 bases:
>100_bases AGAAATCTAAGCCGTTTAGAACAATGCTCCTTACTTCTTGAGTTTTGTTCTAAATTTCCCACTCATTTGTGAAAATACAA ACATGAAAGCGTGATTAAAC
Downstream 100 bases:
>100_bases AAAACAACCCTTGTGAGCATGAAAAGTTCACAAGGGTTGTTTTTATTAACTTGAAGCTGCTGCTGCACTCGCCGCGGCTG CTGCACTTACTGCTGCCGCT
Product: serine/threonine protein phosphatase family protein
Products: NA
Alternate protein names: Phosphohydrolase; Serine/Threonine Protein Phosphatase Family Protein; Ser/Thr Protein Phosphatase Family Protein; 3 5'-Cyclic-Nucleotide Phosphodiesterase; 5-Nucleotidase Domain-Containing Protein; Calcineurin-Like Phosphoesterase; Serine/Threonine Protein Phosphatase; 3 5-Cyclic-Nucleotide Phosphodiesterase; 5-Nucleotidase Domain Protein; Lipoprotein
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MIQFLKFVILLLISSSLFGCSSTSDKTEKITAPIEKDQDLSIIETTDVHYFAPSLTDNGAAFKQYVAAGDGKQLAYSDEI TDAFLEDVEAKKTDVLIISGDLTNNGEKTSHEELAKKLAQVEKAGTQVFVVPGNHDINNPWARKFEKDKQLPTDTITPTD FSKIYGDFGYKDAISSDDFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGTPTTEGGLTTGTLDWVKECSTLAEKNGAKLIP VMHHNLTNHSDVIQRGFTINYNQQVIDTLTAGNMEFSLSGHIHTQNIRTAKSTDGKEITDIVTNALSVYPHKYGNITYSA KNKNFTYQSQKLDIESWAKEHGKTDKNLLNFDQFDYDTFYNSGYDKAIMDLMTSDAYKTYSQSDKEKMADTMGLNNMYFF AGTAPPKSAGMALWDSAPNSFLKDYVLSTSNPPKNSNDYYVSP
Sequences:
>Translated_443_residues MIQFLKFVILLLISSSLFGCSSTSDKTEKITAPIEKDQDLSIIETTDVHYFAPSLTDNGAAFKQYVAAGDGKQLAYSDEI TDAFLEDVEAKKTDVLIISGDLTNNGEKTSHEELAKKLAQVEKAGTQVFVVPGNHDINNPWARKFEKDKQLPTDTITPTD FSKIYGDFGYKDAISSDDFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGTPTTEGGLTTGTLDWVKECSTLAEKNGAKLIP VMHHNLTNHSDVIQRGFTINYNQQVIDTLTAGNMEFSLSGHIHTQNIRTAKSTDGKEITDIVTNALSVYPHKYGNITYSA KNKNFTYQSQKLDIESWAKEHGKTDKNLLNFDQFDYDTFYNSGYDKAIMDLMTSDAYKTYSQSDKEKMADTMGLNNMYFF AGTAPPKSAGMALWDSAPNSFLKDYVLSTSNPPKNSNDYYVSP >Mature_443_residues MIQFLKFVILLLISSSLFGCSSTSDKTEKITAPIEKDQDLSIIETTDVHYFAPSLTDNGAAFKQYVAAGDGKQLAYSDEI TDAFLEDVEAKKTDVLIISGDLTNNGEKTSHEELAKKLAQVEKAGTQVFVVPGNHDINNPWARKFEKDKQLPTDTITPTD FSKIYGDFGYKDAISSDDFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGTPTTEGGLTTGTLDWVKECSTLAEKNGAKLIP VMHHNLTNHSDVIQRGFTINYNQQVIDTLTAGNMEFSLSGHIHTQNIRTAKSTDGKEITDIVTNALSVYPHKYGNITYSA KNKNFTYQSQKLDIESWAKEHGKTDKNLLNFDQFDYDTFYNSGYDKAIMDLMTSDAYKTYSQSDKEKMADTMGLNNMYFF AGTAPPKSAGMALWDSAPNSFLKDYVLSTSNPPKNSNDYYVSP
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49262; Mature: 49262
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQFLKFVILLLISSSLFGCSSTSDKTEKITAPIEKDQDLSIIETTDVHYFAPSLTDNGA CHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCEEECCCCCCCCH AFKQYVAAGDGKQLAYSDEITDAFLEDVEAKKTDVLIISGDLTNNGEKTSHEELAKKLAQ HHHHHHHCCCCCEEEECHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH VEKAGTQVFVVPGNHDINNPWARKFEKDKQLPTDTITPTDFSKIYGDFGYKDAISSDDFS HHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCE LSYLAAPSSKVWLLMLDTAIYKTNMQQGTPTTEGGLTTGTLDWVKECSTLAEKNGAKLIP EEEEECCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE VMHHNLTNHSDVIQRGFTINYNQQVIDTLTAGNMEFSLSGHIHTQNIRTAKSTDGKEITD EHHCCCCCHHHHHHCCCEECCCHHHHHHHHCCCEEEEEECCEEECCCCCCCCCCCHHHHH IVTNALSVYPHKYGNITYSAKNKNFTYQSQKLDIESWAKEHGKTDKNLLNFDQFDYDTFY HHHHHHHHCCCCCCCEEEEECCCCEEECHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHH NSGYDKAIMDLMTSDAYKTYSQSDKEKMADTMGLNNMYFFAGTAPPKSAGMALWDSAPNS CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCHH FLKDYVLSTSNPPKNSNDYYVSP HHHHHHHCCCCCCCCCCCEEECC >Mature Secondary Structure MIQFLKFVILLLISSSLFGCSSTSDKTEKITAPIEKDQDLSIIETTDVHYFAPSLTDNGA CHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCEEECCCCCCCCH AFKQYVAAGDGKQLAYSDEITDAFLEDVEAKKTDVLIISGDLTNNGEKTSHEELAKKLAQ HHHHHHHCCCCCEEEECHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH VEKAGTQVFVVPGNHDINNPWARKFEKDKQLPTDTITPTDFSKIYGDFGYKDAISSDDFS HHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCE LSYLAAPSSKVWLLMLDTAIYKTNMQQGTPTTEGGLTTGTLDWVKECSTLAEKNGAKLIP EEEEECCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE VMHHNLTNHSDVIQRGFTINYNQQVIDTLTAGNMEFSLSGHIHTQNIRTAKSTDGKEITD EHHCCCCCHHHHHHCCCEECCCHHHHHHHHCCCEEEEEECCEEECCCCCCCCCCCHHHHH IVTNALSVYPHKYGNITYSAKNKNFTYQSQKLDIESWAKEHGKTDKNLLNFDQFDYDTFY HHHHHHHHCCCCCCCEEEEECCCCEEECHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHH NSGYDKAIMDLMTSDAYKTYSQSDKEKMADTMGLNNMYFFAGTAPPKSAGMALWDSAPNS CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCHH FLKDYVLSTSNPPKNSNDYYVSP HHHHHHHCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA