| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116873930
Identifier: 116873930
GI number: 116873930
Start: 2554852
End: 2555037
Strand: Direct
Name: 116873930
Synonym: lwe2514
Alternate gene names: NA
Gene position: 2554852-2555037 (Clockwise)
Preceding gene: 116873924
Following gene: 116873944
Centisome position: 90.79
GC content: 37.1
Gene sequence:
>186_bases ATGCCATTTGTTACCATTCAATTCTTAGAAGGTCGTAGTGACGATCAAAAGAAAGCTTTAGTCAGCGAAGTAACCGACGT AGTTTCCAACAACCTAAAAGCGCCAAAAGAAAATATCCACGTAATTTTGCAAGAAATGAAAAAAACAGATTACGGGGTAG GCGGCGTAAGAAAATCTGATATTTAA
Upstream 100 bases:
>100_bases CAAAGGATAAGCGAGAAAACTAGGCATAGGAGCCTCCTTTATCTTTTAATGAGTAATTTTTATATGCTATAATGAAAAAA ACATTTATCGAGGTGAGAAA
Downstream 100 bases:
>100_bases GCATTACTAGAAGCAAGATTTAATTGTCTTGCTTCTTTTATTTTTCTTTTAATGAATGTGCATGTATTAAAGAAATCATT CTTTCAGCAACTACGGGTTC
Product: 4-oxalocrotonate tautomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 60
Protein sequence:
>61_residues MPFVTIQFLEGRSDDQKKALVSEVTDVVSNNLKAPKENIHVILQEMKKTDYGVGGVRKSDI
Sequences:
>Translated_61_residues MPFVTIQFLEGRSDDQKKALVSEVTDVVSNNLKAPKENIHVILQEMKKTDYGVGGVRKSDI >Mature_60_residues PFVTIQFLEGRSDDQKKALVSEVTDVVSNNLKAPKENIHVILQEMKKTDYGVGGVRKSDI
Specific function: Unknown
COG id: COG1942
COG function: function code R; Uncharacterized protein, 4-oxalocrotonate tautomerase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-oxalocrotonate tautomerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004370 - InterPro: IPR018191 - InterPro: IPR014347 [H]
Pfam domain/function: PF01361 Tautomerase [H]
EC number: NA
Molecular weight: Translated: 6818; Mature: 6687
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFVTIQFLEGRSDDQKKALVSEVTDVVSNNLKAPKENIHVILQEMKKTDYGVGGVRKSD CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC I C >Mature Secondary Structure PFVTIQFLEGRSDDQKKALVSEVTDVVSNNLKAPKENIHVILQEMKKTDYGVGGVRKSD CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA