| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116873944
Identifier: 116873944
GI number: 116873944
Start: 2565281
End: 2566156
Strand: Direct
Name: 116873944
Synonym: lwe2528
Alternate gene names: NA
Gene position: 2565281-2566156 (Clockwise)
Preceding gene: 116873930
Following gene: 116873945
Centisome position: 91.16
GC content: 35.96
Gene sequence:
>876_bases GTGAAGAAATATTTTGTTACAATCATGATTTTACTTTTTGGTAGTTTAATTCTCACAGCATGCCAAAAAGACAGCGAAGT TACAAGTTCTTCGCCTCCAAAAGTAGATTTAAAAAAGGAAATACCCATTATTTTAATTCATGGTAGTGGCGGTGATACGC ATTCATTAGATGAGATGGCTGATCACTTAATGAATGAATATAAAAGCTCCACCGAAGAAATGTCTATGTCTATTAGCGAA AAAGGAACAATCACTTATCAAGGCAAACTTACAAAAGATGCTAAACGTCCCATAATTAAATTTGGTTTTGATCAAAATCA AGCAGCACCGATGGACTGGTCCGATTTACTGAAAATAGCTATGCAAGATTTAAAAACACGTTATGGTTTTACACAAATGG ACGGGGTTGGTCATTCGAACGGTGGCTTGGCGTTAACTTATTTTGCAGAAGATTATTCCAAAGATAATACCGTACCAAAT CTGCGCAAATTAGTTGCAGTCGGCTCCCCTTTTAATGATTTAGATCCAGATGATAATGGAGATGATTTAACGTTTAAAAA GTTACCAAACAACACTTCCCAACTAGATTATTTTATTGAAAAAGAAACCAAGGTGAACCCTGACCTTGAAGTACTTTCCA TTGCTGGGGCTCTTAGCGAAGATAATCTAACTGATGGCATTGTCCCAACCAATAGTTCGCTAGCTTCTAGACTCTTCATG CCAACTAACGCAAAAGTTTATATGGAAGATTTACAAGTCGGCGAAAGCGCAATTCATCAAACATTACACGAAACGCCCGA AAGCACCAAGAAAACTTATTGGTTTTTAGAAAAATATCAACCTACAAAAAGCGAAATTAAATTAGTTTCAAAATAG
Upstream 100 bases:
>100_bases TCTAAATTTCTGTTATTATGTACCTCGATTATAGACGAGTTTTGCATGATTGTCACGCCGATATTTGATATACTAAATGG GAATGGGAGGACGATAATTA
Downstream 100 bases:
>100_bases GAGGAATAATTATGTTGCATATAGAAGCAAAAGTTCAAGTAAAACCTGATTTAGTAGAAGCATTTTTAGCAGAAGTGAAT CTAGTTATTCAAGGTTCTCT
Product: putative lipoprotein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Superfamily Protein; Lipoprotein; Hydrolase; Lipase/Esterase; Alpha/Beta Hydrolase; Extracellular Lipase/Esterase; Cell Surface Hydrolas; Acyltransferase; Secreted Protein
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKKYFVTIMILLFGSLILTACQKDSEVTSSSPPKVDLKKEIPIILIHGSGGDTHSLDEMADHLMNEYKSSTEEMSMSISE KGTITYQGKLTKDAKRPIIKFGFDQNQAAPMDWSDLLKIAMQDLKTRYGFTQMDGVGHSNGGLALTYFAEDYSKDNTVPN LRKLVAVGSPFNDLDPDDNGDDLTFKKLPNNTSQLDYFIEKETKVNPDLEVLSIAGALSEDNLTDGIVPTNSSLASRLFM PTNAKVYMEDLQVGESAIHQTLHETPESTKKTYWFLEKYQPTKSEIKLVSK
Sequences:
>Translated_291_residues MKKYFVTIMILLFGSLILTACQKDSEVTSSSPPKVDLKKEIPIILIHGSGGDTHSLDEMADHLMNEYKSSTEEMSMSISE KGTITYQGKLTKDAKRPIIKFGFDQNQAAPMDWSDLLKIAMQDLKTRYGFTQMDGVGHSNGGLALTYFAEDYSKDNTVPN LRKLVAVGSPFNDLDPDDNGDDLTFKKLPNNTSQLDYFIEKETKVNPDLEVLSIAGALSEDNLTDGIVPTNSSLASRLFM PTNAKVYMEDLQVGESAIHQTLHETPESTKKTYWFLEKYQPTKSEIKLVSK >Mature_291_residues MKKYFVTIMILLFGSLILTACQKDSEVTSSSPPKVDLKKEIPIILIHGSGGDTHSLDEMADHLMNEYKSSTEEMSMSISE KGTITYQGKLTKDAKRPIIKFGFDQNQAAPMDWSDLLKIAMQDLKTRYGFTQMDGVGHSNGGLALTYFAEDYSKDNTVPN LRKLVAVGSPFNDLDPDDNGDDLTFKKLPNNTSQLDYFIEKETKVNPDLEVLSIAGALSEDNLTDGIVPTNSSLASRLFM PTNAKVYMEDLQVGESAIHQTLHETPESTKKTYWFLEKYQPTKSEIKLVSK
Specific function: Unknown
COG id: COG4814
COG function: function code R; Uncharacterized protein with an alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32468; Mature: 32468
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYFVTIMILLFGSLILTACQKDSEVTSSSPPKVDLKKEIPIILIHGSGGDTHSLDEMA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCHHHHH DHLMNEYKSSTEEMSMSISEKGTITYQGKLTKDAKRPIIKFGFDQNQAAPMDWSDLLKIA HHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCHHHCCEEEECCCCCCCCCCCHHHHHHHH MQDLKTRYGFTQMDGVGHSNGGLALTYFAEDYSKDNTVPNLRKLVAVGSPFNDLDPDDNG HHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC DDLTFKKLPNNTSQLDYFIEKETKVNPDLEVLSIAGALSEDNLTDGIVPTNSSLASRLFM CCEEEEECCCCCHHHEEEEECCCCCCCCHHEEEECCCCCCCCCCCCCCCCCHHHHHHEEC PTNAKVYMEDLQVGESAIHQTLHETPESTKKTYWFLEKYQPTKSEIKLVSK CCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCCCHHHHEEECC >Mature Secondary Structure MKKYFVTIMILLFGSLILTACQKDSEVTSSSPPKVDLKKEIPIILIHGSGGDTHSLDEMA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCHHHHH DHLMNEYKSSTEEMSMSISEKGTITYQGKLTKDAKRPIIKFGFDQNQAAPMDWSDLLKIA HHHHHHHHCCHHHHHHHHCCCCEEEEECCCCCHHHCCEEEECCCCCCCCCCCHHHHHHHH MQDLKTRYGFTQMDGVGHSNGGLALTYFAEDYSKDNTVPNLRKLVAVGSPFNDLDPDDNG HHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC DDLTFKKLPNNTSQLDYFIEKETKVNPDLEVLSIAGALSEDNLTDGIVPTNSSLASRLFM CCEEEEECCCCCHHHEEEEECCCCCCCCHHEEEECCCCCCCCCCCCCCCCCHHHHHHEEC PTNAKVYMEDLQVGESAIHQTLHETPESTKKTYWFLEKYQPTKSEIKLVSK CCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHEEEEEECCCCCHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA