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The map label for this gene is ydiM [H]

Identifier: 116873671

GI number: 116873671

Start: 2295501

End: 2296694

Strand: Direct

Name: ydiM [H]

Synonym: lwe2255

Alternate gene names: 116873671

Gene position: 2295501-2296694 (Clockwise)

Preceding gene: 116873670

Following gene: 116873676

Centisome position: 81.57

GC content: 35.09

Gene sequence:

>1194_bases
ATGAAAAATAAATATTTATCCACTTCACTCGGACTTTATATGAACTATTTCGTTCATGGTATGGCACTAATCATCATTGC
TCAAAATATTGATTTTTTATCTCAAAAATGGCATACAGATTTAGCTGGCGCAGCTGGTGTTGTATCTTCCTTTGGGATTG
GTAAACTATTAGCGGTTTTTATTTCTGGAAAGCTGTCTGATAAATTTGGCCGTAAGTTATCCGTTATTCTCGGTGTGTTT
TTCTATATTGTTTTCTTAGGCGGTATTTTATTAAGTCCGAATACTATTGTGGCCTATGCATTTGGTATTTCAGCTGGGAT
TGCGAATTCATTCTTAGACACAGGAACCTATCCAGCACTTATGGAAGCTTATCCAAAAAAAGCTGCATCGGCAAATATTG
TTGTAAAAGCTTTCGTACAAACAGGACAGTTTCTTTTACCATTTATGATTGCATTCATTATTGCAAATAATTTATGGTAT
GGCTGGAGTTTCATTGTGTTAATAGTCATTTTACTCATTAATTTACTGTACATTTTGACTCGGACCTTCCCACCAATGAC
TGTTGGCAAGCCACTTGACTTTGAGAAAGAGGTTGCTAATGAGAAAAAACAGCAATTTCACTTTAGTATTGATGAAATTT
GTTTAATTTTATTTGGCTTTGTAGCACAAACGCTACTTTACATTATGAGCCAATGGATTGCTAAGTATGGTTCAGAAGTA
ATACACATGACCGACAATGCTTCTAGACTACTCGTTAGCTATGCAAGTGTTGGTGCTATCCTTTGTGTCTGCGTAACCTT
CATATTAGGGAATCGCGGTGTTAAAACATTATATATTTTGATAACCTATGTAACCATGACCATGCTTATTTCTTTTACAC
TGTTTATTTTCCAAACAGAAATCGTTTGTTTAGTAGGAGCCTTCTTACTTGGCTATTTCTCGGCTGGAGGTATTATTCAA
CTCGGCTTAACTTTACTTGCAGAAGTTTCCGCTCGAGGAAAAGGCTTTGTTACAAGCCTATATACGATTGCTGAAGGTAT
TGCTGTATTCGTTATTCCACTTATTGCAGCTGCTATTTCTAGAATTGATATTGCAGCAATCTTCTTGTTAAATTCAGGAA
TTGCATTATTTGGATTAATTCTCCTATTGATAGTCTTTACTAGGAAGAAAAAATTTGCTCGTGATCATATTTAA

Upstream 100 bases:

>100_bases
AAGCACAAACTTATGTAATCTATCTATATATTCACTTTTAAAACAAGCGTATTTCTCATAAAAAGGTCTTCGCAAGTGAC
TACACAAAGGAGAGCAGAAT

Downstream 100 bases:

>100_bases
AAAATAGGCAAGAAGCGATTTCTGCTCCTTGCCTATTTTTATTTAATTACCAGTAATGCTTTTACGCTTAAACATTATAA
ACCACAGTACAAGCGCTGTT

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MKNKYLSTSLGLYMNYFVHGMALIIIAQNIDFLSQKWHTDLAGAAGVVSSFGIGKLLAVFISGKLSDKFGRKLSVILGVF
FYIVFLGGILLSPNTIVAYAFGISAGIANSFLDTGTYPALMEAYPKKAASANIVVKAFVQTGQFLLPFMIAFIIANNLWY
GWSFIVLIVILLINLLYILTRTFPPMTVGKPLDFEKEVANEKKQQFHFSIDEICLILFGFVAQTLLYIMSQWIAKYGSEV
IHMTDNASRLLVSYASVGAILCVCVTFILGNRGVKTLYILITYVTMTMLISFTLFIFQTEIVCLVGAFLLGYFSAGGIIQ
LGLTLLAEVSARGKGFVTSLYTIAEGIAVFVIPLIAAAISRIDIAAIFLLNSGIALFGLILLLIVFTRKKKFARDHI

Sequences:

>Translated_397_residues
MKNKYLSTSLGLYMNYFVHGMALIIIAQNIDFLSQKWHTDLAGAAGVVSSFGIGKLLAVFISGKLSDKFGRKLSVILGVF
FYIVFLGGILLSPNTIVAYAFGISAGIANSFLDTGTYPALMEAYPKKAASANIVVKAFVQTGQFLLPFMIAFIIANNLWY
GWSFIVLIVILLINLLYILTRTFPPMTVGKPLDFEKEVANEKKQQFHFSIDEICLILFGFVAQTLLYIMSQWIAKYGSEV
IHMTDNASRLLVSYASVGAILCVCVTFILGNRGVKTLYILITYVTMTMLISFTLFIFQTEIVCLVGAFLLGYFSAGGIIQ
LGLTLLAEVSARGKGFVTSLYTIAEGIAVFVIPLIAAAISRIDIAAIFLLNSGIALFGLILLLIVFTRKKKFARDHI
>Mature_397_residues
MKNKYLSTSLGLYMNYFVHGMALIIIAQNIDFLSQKWHTDLAGAAGVVSSFGIGKLLAVFISGKLSDKFGRKLSVILGVF
FYIVFLGGILLSPNTIVAYAFGISAGIANSFLDTGTYPALMEAYPKKAASANIVVKAFVQTGQFLLPFMIAFIIANNLWY
GWSFIVLIVILLINLLYILTRTFPPMTVGKPLDFEKEVANEKKQQFHFSIDEICLILFGFVAQTLLYIMSQWIAKYGSEV
IHMTDNASRLLVSYASVGAILCVCVTFILGNRGVKTLYILITYVTMTMLISFTLFIFQTEIVCLVGAFLLGYFSAGGIIQ
LGLTLLAEVSARGKGFVTSLYTIAEGIAVFVIPLIAAAISRIDIAAIFLLNSGIALFGLILLLIVFTRKKKFARDHI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787981, Length=396, Percent_Identity=41.9191919191919, Blast_Score=310, Evalue=8e-86,
Organism=Escherichia coli, GI226510946, Length=392, Percent_Identity=35.2040816326531, Blast_Score=251, Evalue=5e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43567; Mature: 43567

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]