| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is ampS [H]
Identifier: 116873147
GI number: 116873147
Start: 1749502
End: 1750734
Strand: Direct
Name: ampS [H]
Synonym: lwe1731
Alternate gene names: 116873147
Gene position: 1749502-1750734 (Clockwise)
Preceding gene: 116873146
Following gene: 116873148
Centisome position: 62.17
GC content: 39.42
Gene sequence:
>1233_bases ATGACAGTATTTAGTGAAAAGTTAGAAAAGTATGCAGAATTGATTGTAAAAGTTGGGGTAAATGTCCAACCTGAGCAGAA AGTGGTAATTATGGCTCCAGTTGACGCAGCTCCACTCGTTCGTCTTATTTCTAAGTACGCTTTTGAAGTTGGCGCAGAAG ATGTCATTATGGATTGGCGCGATGAAGAATTAGGCGCTTTACGTTATAAGAATGCTCCATTACGCGTTTTCGAAAGTGCT CCAGTTCACCGTGTTGCAGAAAAAACAGAACTTGCCAAAGAAGGCGCTTGTTTTATCTCCATTACATCAGAAGACCCCGA TTTACTAAACGGTGTGGATAGCAACAAAATTGCAACATTCCAAAAAACAATGGGTGGCGCAATGAGTGAATTCCGCGAAT TAATGCAAGCAAACGTGGTAAGCTGGACAGTTGTTGCAGCTGCTTCACAAGGTTGGGCAGCAAAAGTATTCCCAGATTTA ACTCCAGTAGAACAAATGGAAACACTTTGGGAAGCTATTTTCGAAACAACACGTATTAATACGGAAAATCCAGTAGAAAC TTGGAAAAACCACGATCAGACTCTTGCTGCAAAAGCAGATAGTTTAAATGAAAAACAATTTACTTCTTTACATTATACGG CTCCTGGAACAGACCTTACAATTGGTCTTCCAAAAAATCATCTTTGGGTTGGCGCTGGTAGTAAGAATAAAAAAGGGCAT GAATTTATGGCCAATATGCCGACAGAAGAAGTATTCTGTTGTGCGGATAAACTAAAAGTGGAAGGGTATGTTTCTAGTAC AAAACCACTTAGTTATGCAGGAAATATTATCGATGACTTCAAAATCACTTTCGAAAAAGGTCGAATTGTAGGTGTAGAAG CAGCATCAGGCGAAGAAATTCTTAAAGATTTAATCGCAACAGATGAAGGTTCTCACTATTTAGGAGAAGTAGCTCTAGTT CCAGATCCTTCCCCTATTTCTCAATCCGGCATTTTATTCTACAACACACTATTTGATGAAAATGCCTCTAACCACTTAGC AATCGGTAGTGCATATGCATTTAATGTTAAAGGTGGCGAAGAAATGTCTCGTGAAGAATTAGAAGCAGCTGGTGTTAACA ATAGTTTAACGCATGTTGACTTTATGATTGGTTCTTCTGAAATGGACATTGATGGTGTAACCGAATCTGGTGAAGTTGTT CCTGTTTTCCGTAAAGGCGACTGGGCGTTCTAA
Upstream 100 bases:
>100_bases ATTTCATTAAAAATAGCGAAAACAGTCGCCTAGTGGTTGCTTTACCTCATTAATTAAGATACAATTCTCATATTGAATAA AAAGATTGGAGTGATTAATT
Downstream 100 bases:
>100_bases ACTTTTTTAAACTTATGCCTTTTTGCGTAAAACCCTTGTAGCTTATTGCTTTCAAGGGTTTTCGTTTGTTATTTTTTATA AAAGAGAGTGAGGTGCATTA
Product: aminopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MTVFSEKLEKYAELIVKVGVNVQPEQKVVIMAPVDAAPLVRLISKYAFEVGAEDVIMDWRDEELGALRYKNAPLRVFESA PVHRVAEKTELAKEGACFISITSEDPDLLNGVDSNKIATFQKTMGGAMSEFRELMQANVVSWTVVAAASQGWAAKVFPDL TPVEQMETLWEAIFETTRINTENPVETWKNHDQTLAAKADSLNEKQFTSLHYTAPGTDLTIGLPKNHLWVGAGSKNKKGH EFMANMPTEEVFCCADKLKVEGYVSSTKPLSYAGNIIDDFKITFEKGRIVGVEAASGEEILKDLIATDEGSHYLGEVALV PDPSPISQSGILFYNTLFDENASNHLAIGSAYAFNVKGGEEMSREELEAAGVNNSLTHVDFMIGSSEMDIDGVTESGEVV PVFRKGDWAF
Sequences:
>Translated_410_residues MTVFSEKLEKYAELIVKVGVNVQPEQKVVIMAPVDAAPLVRLISKYAFEVGAEDVIMDWRDEELGALRYKNAPLRVFESA PVHRVAEKTELAKEGACFISITSEDPDLLNGVDSNKIATFQKTMGGAMSEFRELMQANVVSWTVVAAASQGWAAKVFPDL TPVEQMETLWEAIFETTRINTENPVETWKNHDQTLAAKADSLNEKQFTSLHYTAPGTDLTIGLPKNHLWVGAGSKNKKGH EFMANMPTEEVFCCADKLKVEGYVSSTKPLSYAGNIIDDFKITFEKGRIVGVEAASGEEILKDLIATDEGSHYLGEVALV PDPSPISQSGILFYNTLFDENASNHLAIGSAYAFNVKGGEEMSREELEAAGVNNSLTHVDFMIGSSEMDIDGVTESGEVV PVFRKGDWAF >Mature_409_residues TVFSEKLEKYAELIVKVGVNVQPEQKVVIMAPVDAAPLVRLISKYAFEVGAEDVIMDWRDEELGALRYKNAPLRVFESAP VHRVAEKTELAKEGACFISITSEDPDLLNGVDSNKIATFQKTMGGAMSEFRELMQANVVSWTVVAAASQGWAAKVFPDLT PVEQMETLWEAIFETTRINTENPVETWKNHDQTLAAKADSLNEKQFTSLHYTAPGTDLTIGLPKNHLWVGAGSKNKKGHE FMANMPTEEVFCCADKLKVEGYVSSTKPLSYAGNIIDDFKITFEKGRIVGVEAASGEEILKDLIATDEGSHYLGEVALVP DPSPISQSGILFYNTLFDENASNHLAIGSAYAFNVKGGEEMSREELEAAGVNNSLTHVDFMIGSSEMDIDGVTESGEVVP VFRKGDWAF
Specific function: Metal-dependent exopeptidase [H]
COG id: COG2309
COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M29 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000787 [H]
Pfam domain/function: PF02073 Peptidase_M29 [H]
EC number: NA
Molecular weight: Translated: 44974; Mature: 44843
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVFSEKLEKYAELIVKVGVNVQPEQKVVIMAPVDAAPLVRLISKYAFEVGAEDVIMDWR CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEECCC DEELGALRYKNAPLRVFESAPVHRVAEKTELAKEGACFISITSEDPDLLNGVDSNKIATF CCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCCCEEHH QKTMGGAMSEFRELMQANVVSWTVVAAASQGWAAKVFPDLTPVEQMETLWEAIFETTRIN HHHHCHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCC TENPVETWKNHDQTLAAKADSLNEKQFTSLHYTAPGTDLTIGLPKNHLWVGAGSKNKKGH CCCCHHHHCCCCCEEEHHHCCCCCHHEEEEEEECCCCEEEEECCCCEEEEECCCCCCCCC EFMANMPTEEVFCCADKLKVEGYVSSTKPLSYAGNIIDDFKITFEKGRIVGVEAASGEEI HHHHCCCHHHEEEEHHHEEEEEEECCCCCCHHCCCCEECEEEEEECCEEEEEECCCHHHH LKDLIATDEGSHYLGEVALVPDPSPISQSGILFYNTLFDENASNHLAIGSAYAFNVKGGE HHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEECCCCH EMSREELEAAGVNNSLTHVDFMIGSSEMDIDGVTESGEVVPVFRKGDWAF HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure TVFSEKLEKYAELIVKVGVNVQPEQKVVIMAPVDAAPLVRLISKYAFEVGAEDVIMDWR CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEECCC DEELGALRYKNAPLRVFESAPVHRVAEKTELAKEGACFISITSEDPDLLNGVDSNKIATF CCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCCCEEHH QKTMGGAMSEFRELMQANVVSWTVVAAASQGWAAKVFPDLTPVEQMETLWEAIFETTRIN HHHHCHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCC TENPVETWKNHDQTLAAKADSLNEKQFTSLHYTAPGTDLTIGLPKNHLWVGAGSKNKKGH CCCCHHHHCCCCCEEEHHHCCCCCHHEEEEEEECCCCEEEEECCCCEEEEECCCCCCCCC EFMANMPTEEVFCCADKLKVEGYVSSTKPLSYAGNIIDDFKITFEKGRIVGVEAASGEEI HHHHCCCHHHEEEEHHHEEEEEEECCCCCCHHCCCCEECEEEEEECCEEEEEECCCHHHH LKDLIATDEGSHYLGEVALVPDPSPISQSGILFYNTLFDENASNHLAIGSAYAFNVKGGE HHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEECCCCH EMSREELEAAGVNNSLTHVDFMIGSSEMDIDGVTESGEVVPVFRKGDWAF HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969500; 9384377 [H]