| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is yqjV [H]
Identifier: 116873148
GI number: 116873148
Start: 1750836
End: 1752092
Strand: Direct
Name: yqjV [H]
Synonym: lwe1732
Alternate gene names: 116873148
Gene position: 1750836-1752092 (Clockwise)
Preceding gene: 116873147
Following gene: 116873149
Centisome position: 62.22
GC content: 36.52
Gene sequence:
>1257_bases ATGAAATTTAGTACATGGGACATCAATTTAAAAGTGAGGCTTTTTGGGGAAGCACTGCTCGATATTTCTTTTTGGATGGT CTTCCCCTTTCTCACTATTTACTTTTCGGAAAGTATTGGGCGTGAACTTACAAGTATCTTGCTAATTATTTCGCAAATTT TGGCGGTTTTTACAGCATTACTTGGCGGCTATTTTGCAGATAATTTTGGTAGAAAACGGATGATGAGTATTTCTGTTATT GGGGAAGGTTTTGGTTTTCTAGTTTTTGCAATAGGTGCACTTCATGTTGTAAACTCCCCTTATTTAAGTTTTGCTGGTTT TGCAATTGCGAGTGTCTTTATGGCTTTTTATCAGCCAGCGAGTCAAGCGATGATTGCCGATGTGGTTCCACTTGAACACC GGACACATATTTACTCGGTTTTTTATATGATGATTAATATTGCGGTAGTTATTGGACCGATTCTTGGTTCGGTGTTATTT TATAATTTTACAACAGAAACATTACTTGCGATTGTTTGCGCAGATTTATTACTACTCTTTTTACTTCAAAAATTCGGTCA TGAAACGGCGCCACTTTTGACTAATCCAGCTCTTAAAAAAGAAGCTGTACGGAAAAGCATTGGTACAGTGTTAATAGAGC AATTAAAAAATTATAAGATTATTTTTAAAGATAAGATTTTCTTCTTATACATTATTGCTGGGATTATTATTTCTCAGTCG TTTATGCAACTGGATTTGTTATTCCCGCTTTATATTAAAGAAGTAATTGGTGCATCTGACTTGTTCTCTTTTCATTTTAC TGGTGAACAGTTGTTTGGCGTTATTGTCTCTATCAACGGCTTCTTTGTTGCAGCGCTTACGGTTGTTGTTACTCGCTGGA TGAGCCATTTTAGAGAAAAATTCGTCTTTATGAATTCTTCTTTCCTTTATGCGATTGCGATATTCATTTTCGGTATTTCG ACTGGTCCATGGGTAGCCATTTTTGCGATTATCCTTTTTAGTTTTGCGGAACTAATGACGGTTGGTTTACAACAAAATTT CGTTTCTCAATTAGCTCCTGAAGATAAGCGCGCGATGTATTTCTCTGCTGCTGGTCTTCGTTACACGCTTGGTAAAGTAA TTGCGCCTCTTGCCATTACACTTGCGGCATTAATCGGCTATACAAGCACTTTTGTCATTATTGGCATTTTAGCACTTATT AGTGGGCTCATTTACTACTACATGTATGCAGAATTTGAAAAACAACGTCAAGCTTAA
Upstream 100 bases:
>100_bases CTTTTTTAAACTTATGCCTTTTTGCGTAAAACCCTTGTAGCTTATTGCTTTCAAGGGTTTTCGTTTGTTATTTTTTATAA AAGAGAGTGAGGTGCATTAG
Downstream 100 bases:
>100_bases GAAAAACGGCTATCTATTTTGATAGTCGTTTTTTGGTTTGATTACGATTTTTACGATTTATTTACGAAATGCTGAAAACA CCTGTTATATCATCGTTTTA
Product: MFS transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MKFSTWDINLKVRLFGEALLDISFWMVFPFLTIYFSESIGRELTSILLIISQILAVFTALLGGYFADNFGRKRMMSISVI GEGFGFLVFAIGALHVVNSPYLSFAGFAIASVFMAFYQPASQAMIADVVPLEHRTHIYSVFYMMINIAVVIGPILGSVLF YNFTTETLLAIVCADLLLLFLLQKFGHETAPLLTNPALKKEAVRKSIGTVLIEQLKNYKIIFKDKIFFLYIIAGIIISQS FMQLDLLFPLYIKEVIGASDLFSFHFTGEQLFGVIVSINGFFVAALTVVVTRWMSHFREKFVFMNSSFLYAIAIFIFGIS TGPWVAIFAIILFSFAELMTVGLQQNFVSQLAPEDKRAMYFSAAGLRYTLGKVIAPLAITLAALIGYTSTFVIIGILALI SGLIYYYMYAEFEKQRQA
Sequences:
>Translated_418_residues MKFSTWDINLKVRLFGEALLDISFWMVFPFLTIYFSESIGRELTSILLIISQILAVFTALLGGYFADNFGRKRMMSISVI GEGFGFLVFAIGALHVVNSPYLSFAGFAIASVFMAFYQPASQAMIADVVPLEHRTHIYSVFYMMINIAVVIGPILGSVLF YNFTTETLLAIVCADLLLLFLLQKFGHETAPLLTNPALKKEAVRKSIGTVLIEQLKNYKIIFKDKIFFLYIIAGIIISQS FMQLDLLFPLYIKEVIGASDLFSFHFTGEQLFGVIVSINGFFVAALTVVVTRWMSHFREKFVFMNSSFLYAIAIFIFGIS TGPWVAIFAIILFSFAELMTVGLQQNFVSQLAPEDKRAMYFSAAGLRYTLGKVIAPLAITLAALIGYTSTFVIIGILALI SGLIYYYMYAEFEKQRQA >Mature_418_residues MKFSTWDINLKVRLFGEALLDISFWMVFPFLTIYFSESIGRELTSILLIISQILAVFTALLGGYFADNFGRKRMMSISVI GEGFGFLVFAIGALHVVNSPYLSFAGFAIASVFMAFYQPASQAMIADVVPLEHRTHIYSVFYMMINIAVVIGPILGSVLF YNFTTETLLAIVCADLLLLFLLQKFGHETAPLLTNPALKKEAVRKSIGTVLIEQLKNYKIIFKDKIFFLYIIAGIIISQS FMQLDLLFPLYIKEVIGASDLFSFHFTGEQLFGVIVSINGFFVAALTVVVTRWMSHFREKFVFMNSSFLYAIAIFIFGIS TGPWVAIFAIILFSFAELMTVGLQQNFVSQLAPEDKRAMYFSAAGLRYTLGKVIAPLAITLAALIGYTSTFVIIGILALI SGLIYYYMYAEFEKQRQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI87081828, Length=359, Percent_Identity=23.3983286908078, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1787815, Length=356, Percent_Identity=25, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001958 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46868; Mature: 46868
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00284 SERPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSTWDINLKVRLFGEALLDISFWMVFPFLTIYFSESIGRELTSILLIISQILAVFTAL CCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGYFADNFGRKRMMSISVIGEGFGFLVFAIGALHVVNSPYLSFAGFAIASVFMAFYQPA HHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCH SQAMIADVVPLEHRTHIYSVFYMMINIAVVIGPILGSVLFYNFTTETLLAIVCADLLLLF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQKFGHETAPLLTNPALKKEAVRKSIGTVLIEQLKNYKIIFKDKIFFLYIIAGIIISQS HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHH FMQLDLLFPLYIKEVIGASDLFSFHFTGEQLFGVIVSINGFFVAALTVVVTRWMSHFREK HHHHHHHHHHHHHHHHCHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVFMNSSFLYAIAIFIFGISTGPWVAIFAIILFSFAELMTVGLQQNFVSQLAPEDKRAMY HHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEE FSAAGLRYTLGKVIAPLAITLAALIGYTSTFVIIGILALISGLIYYYMYAEFEKQRQA EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKFSTWDINLKVRLFGEALLDISFWMVFPFLTIYFSESIGRELTSILLIISQILAVFTAL CCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGYFADNFGRKRMMSISVIGEGFGFLVFAIGALHVVNSPYLSFAGFAIASVFMAFYQPA HHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCH SQAMIADVVPLEHRTHIYSVFYMMINIAVVIGPILGSVLFYNFTTETLLAIVCADLLLLF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLQKFGHETAPLLTNPALKKEAVRKSIGTVLIEQLKNYKIIFKDKIFFLYIIAGIIISQS HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHH FMQLDLLFPLYIKEVIGASDLFSFHFTGEQLFGVIVSINGFFVAALTVVVTRWMSHFREK HHHHHHHHHHHHHHHHCHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVFMNSSFLYAIAIFIFGISTGPWVAIFAIILFSFAELMTVGLQQNFVSQLAPEDKRAMY HHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEE FSAAGLRYTLGKVIAPLAITLAALIGYTSTFVIIGILALISGLIYYYMYAEFEKQRQA EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]