Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116873143

Identifier: 116873143

GI number: 116873143

Start: 1746792

End: 1747013

Strand: Direct

Name: 116873143

Synonym: lwe1727

Alternate gene names: NA

Gene position: 1746792-1747013 (Clockwise)

Preceding gene: 116873141

Following gene: 116873146

Centisome position: 62.07

GC content: 31.53

Gene sequence:

>222_bases
ATGAATCTTGAAACCCCTTCACAGGAAAACGTGAATTTTATGTTAACAGAAATTACCACTAAATTAAAGATGGTGAATGT
TGGTGTTTTTGAAAATCTTGAGCTTGACTCTGTTGATTATAACGCACTTATTGATATTTATCAGCTAATTAAACGCAAAT
CAAATTTTAGTCCCCGCGAAATGCAATTATTTGCAGAAGAGTTACGCAGAATTAGAAAATAA

Upstream 100 bases:

>100_bases
TCACCCACACGTATAAGGCCCCCCTTTTCTAGTCATTCATCTGGAAGTTTTTCTTCTGTTATGGTAAAATTTTGTCTATT
AGCTTGAAAGGAGCAAAAAG

Downstream 100 bases:

>100_bases
AGCAAATTCCGGCCACTTTTTAGTGGTTTTTTGTTTGGAAATAATTAGTCCCAAAATCAACTAAGTCACGCATATCATAA
ATCTTTGTCGGTGCACCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MNLETPSQENVNFMLTEITTKLKMVNVGVFENLELDSVDYNALIDIYQLIKRKSNFSPREMQLFAEELRRIRK

Sequences:

>Translated_73_residues
MNLETPSQENVNFMLTEITTKLKMVNVGVFENLELDSVDYNALIDIYQLIKRKSNFSPREMQLFAEELRRIRK
>Mature_73_residues
MNLETPSQENVNFMLTEITTKLKMVNVGVFENLELDSVDYNALIDIYQLIKRKSNFSPREMQLFAEELRRIRK

Specific function: Unknown

COG id: COG4840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0435 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009507 [H]

Pfam domain/function: PF06569 DUF1128 [H]

EC number: NA

Molecular weight: Translated: 8667; Mature: 8667

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLETPSQENVNFMLTEITTKLKMVNVGVFENLELDSVDYNALIDIYQLIKRKSNFSPRE
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
MQLFAEELRRIRK
HHHHHHHHHHHCC
>Mature Secondary Structure
MNLETPSQENVNFMLTEITTKLKMVNVGVFENLELDSVDYNALIDIYQLIKRKSNFSPRE
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
MQLFAEELRRIRK
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]