| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116873141
Identifier: 116873141
GI number: 116873141
Start: 1745160
End: 1745804
Strand: Direct
Name: 116873141
Synonym: lwe1725
Alternate gene names: NA
Gene position: 1745160-1745804 (Clockwise)
Preceding gene: 116873134
Following gene: 116873143
Centisome position: 62.01
GC content: 33.18
Gene sequence:
>645_bases ATGGAAGGAGTAGGAAATAAAGTGATTGTTTTAGCAGGAATGATTGGCGCTGGAAAAAGTAGTTATACAGAGCTAATTGC AAATGAACTTGGAACAAAAGCATTTTATGAAAGCATTAAGGATAATCGGATCTTAGAAATGTTTTATGATGACCCAAAAA GATGGGCTTTTGCCTTACAAATATATTTTTTAAATACTCGTTTTCGTAGTATCAAAGCCGCGTTAACGGATCAAAATAAT GTGCTAGATCGGAGCATTTATGAAGACGCCCTTTTTACACAAATTAATTTTGAAGAAGGTAATATTTCTGAACCTGAGAT GGATACATATCTTGATTTACTCGACAATATGATGGAAGAACTTGCTTATATGCCAAAAAAAGCACCGGATTTGTTAATTT ATTTACGTGGGAGTTTGGACACGGTTTTAAGTAGAATTTCTCTTCGGGGACGTCCTTACGAACAAATTGGTGCTAATCCT GGTTTACTTGAATATTATAAACATCTCCATAGTCGTTATGATAGCTGGTTTGCATCTTATGATAAGAGTGAAACACTTGT AATTAATATTGACGAAATTGATATTAATAAACCAAATGACGCAGATTATGTCATGCAACTTATTCATGAAAAATTAAAAC GCTAA
Upstream 100 bases:
>100_bases TCCCTCATTTCTTCTCTTTTATCGTACAAAAAATCTCCTTATTAAGCAAATTAGTAGTATAATGAACAAATAGTCGACCA AAAAGGAGGCTGCTCGAGTT
Downstream 100 bases:
>100_bases AACAGCACGTACTGTTTTAGCGTTTTTTTAATTTATTTCGCCTAATTCTTTCTTCTTTTTACGAATAGCAAGGGTTGCAT TTAGCTCTCCGCCAATCATT
Product: deoxynucleoside kinase family protein
Products: NA
Alternate protein names: DGK; DGUO kinase; Deoxynucleoside kinase complex I F-component [H]
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MEGVGNKVIVLAGMIGAGKSSYTELIANELGTKAFYESIKDNRILEMFYDDPKRWAFALQIYFLNTRFRSIKAALTDQNN VLDRSIYEDALFTQINFEEGNISEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRISLRGRPYEQIGANP GLLEYYKHLHSRYDSWFASYDKSETLVINIDEIDINKPNDADYVMQLIHEKLKR
Sequences:
>Translated_214_residues MEGVGNKVIVLAGMIGAGKSSYTELIANELGTKAFYESIKDNRILEMFYDDPKRWAFALQIYFLNTRFRSIKAALTDQNN VLDRSIYEDALFTQINFEEGNISEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRISLRGRPYEQIGANP GLLEYYKHLHSRYDSWFASYDKSETLVINIDEIDINKPNDADYVMQLIHEKLKR >Mature_214_residues MEGVGNKVIVLAGMIGAGKSSYTELIANELGTKAFYESIKDNRILEMFYDDPKRWAFALQIYFLNTRFRSIKAALTDQNN VLDRSIYEDALFTQINFEEGNISEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRISLRGRPYEQIGANP GLLEYYKHLHSRYDSWFASYDKSETLVINIDEIDINKPNDADYVMQLIHEKLKR
Specific function: DGK/DAK plays an essential role in generating the deoxyribonucleotide precursors, dGTP and dATP, for DNA metabolism [H]
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
Organism=Homo sapiens, GI4503269, Length=221, Percent_Identity=29.4117647058824, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI17738037, Length=205, Percent_Identity=25.8536585365854, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 24777; Mature: 24777
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGVGNKVIVLAGMIGAGKSSYTELIANELGTKAFYESIKDNRILEMFYDDPKRWAFALQ CCCCCCEEEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHCCCCEEEEECCCCHHEEEEEE IYFLNTRFRSIKAALTDQNNVLDRSIYEDALFTQINFEEGNISEPEMDTYLDLLDNMMEE EEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHH LAYMPKKAPDLLIYLRGSLDTVLSRISLRGRPYEQIGANPGLLEYYKHLHSRYDSWFASY HHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHC DKSETLVINIDEIDINKPNDADYVMQLIHEKLKR CCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MEGVGNKVIVLAGMIGAGKSSYTELIANELGTKAFYESIKDNRILEMFYDDPKRWAFALQ CCCCCCEEEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHCCCCEEEEECCCCHHEEEEEE IYFLNTRFRSIKAALTDQNNVLDRSIYEDALFTQINFEEGNISEPEMDTYLDLLDNMMEE EEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHH LAYMPKKAPDLLIYLRGSLDTVLSRISLRGRPYEQIGANPGLLEYYKHLHSRYDSWFASY HHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHC DKSETLVINIDEIDINKPNDADYVMQLIHEKLKR CCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7896798; 8172906 [H]