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The map label for this gene is yfcH [C]

Identifier: 116873128

GI number: 116873128

Start: 1734327

End: 1735229

Strand: Direct

Name: yfcH [C]

Synonym: lwe1712

Alternate gene names: 116873128

Gene position: 1734327-1735229 (Clockwise)

Preceding gene: 116873124

Following gene: 116873131

Centisome position: 61.63

GC content: 35.66

Gene sequence:

>903_bases
TTGAATATCTTGCTTACAGGCGCAACGGGTTTTATTGGTGATCATTTAGTACATGAGTTGGAAAAATCTGATCACGAACT
TTATATTTTAACAAGACAAAAACTTCAAAACCGCGCAAATGTACATTATATTGAATGGTTAAATGATGATAAGTTACCAA
ATTTAGACGATTTACCAGTAGATATTTGTATTAATTTTGCTGGTGCTGGTTTAATGGATGAAAAATGGACTTACGATAGA
AAGAAAGTGATTGTAAATAGCCGCATCGAAGCTACTTCTGCACTCTTATCCATTGTGAAGAAAATGAAATCCAAGCCAAA
ATTGTGGATTAACGCGAGTGCAATTGGCGCTTACACATCTTCCAAATCCACTATTTATCTTGATACAGAAGAAAATAGTT
ATGCAGATAATTTCTTAGGAAAAACTGTCTATGAATGGGAAAAGACAGCTAGTGCAGCGAGTGATTTAGGTATTCGTGTT
GTTTATGCTCGCTTTGGGCTTGTACTTGGAACTGGCGGAGGTTCATTCCCCGTTTTTGAGAAGCTATTCCGAACTTATAC
TGGTGGAAAATTCGGCAGTGGTAAGCAATGGTATTCTTGGATTCATGTAGATGACGTGGTTAGGGCTATTTTATTTATTT
TTGATCACGAGCAGATTGATGGAGTTGTTAATTTTACTGCTCCTCATCCTGTTCAAGAAAAGAAATTTGCTGAACGGCTT
GGTAAAAAAATGCATAAACCATATAAAACACCGGTTCCGAAAAAAATTATTAAATTCATTCTTGGTGAACGGGCAGTGAC
GATTTTAGATAGTCAAAGAGCTTATCCTCAAAAACTGATGAGCAATCATTTTGAATTTCGTTTCCAAACTTTACAAGAAG
CTTTAGATGATTTAGTGGATTAG

Upstream 100 bases:

>100_bases
CATAATACGCCTCCTTCACTTCTCTATCATACCGCAAAAATTGGTTTTAATACTACTAAAAAGGGAATAAACTAGTTAGG
ACTATAAAGAGGTGATAATA

Downstream 100 bases:

>100_bases
AAAAAAACCAGATTCTGTTTTACTCAGAATCTGGTTTTTTTGCTTCTTCATTTAGTGGGAAATCAAGGACAATTTGATTA
TTTGCAAGTGGTCGTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MNILLTGATGFIGDHLVHELEKSDHELYILTRQKLQNRANVHYIEWLNDDKLPNLDDLPVDICINFAGAGLMDEKWTYDR
KKVIVNSRIEATSALLSIVKKMKSKPKLWINASAIGAYTSSKSTIYLDTEENSYADNFLGKTVYEWEKTASAASDLGIRV
VYARFGLVLGTGGGSFPVFEKLFRTYTGGKFGSGKQWYSWIHVDDVVRAILFIFDHEQIDGVVNFTAPHPVQEKKFAERL
GKKMHKPYKTPVPKKIIKFILGERAVTILDSQRAYPQKLMSNHFEFRFQTLQEALDDLVD

Sequences:

>Translated_300_residues
MNILLTGATGFIGDHLVHELEKSDHELYILTRQKLQNRANVHYIEWLNDDKLPNLDDLPVDICINFAGAGLMDEKWTYDR
KKVIVNSRIEATSALLSIVKKMKSKPKLWINASAIGAYTSSKSTIYLDTEENSYADNFLGKTVYEWEKTASAASDLGIRV
VYARFGLVLGTGGGSFPVFEKLFRTYTGGKFGSGKQWYSWIHVDDVVRAILFIFDHEQIDGVVNFTAPHPVQEKKFAERL
GKKMHKPYKTPVPKKIIKFILGERAVTILDSQRAYPQKLMSNHFEFRFQTLQEALDDLVD
>Mature_300_residues
MNILLTGATGFIGDHLVHELEKSDHELYILTRQKLQNRANVHYIEWLNDDKLPNLDDLPVDICINFAGAGLMDEKWTYDR
KKVIVNSRIEATSALLSIVKKMKSKPKLWINASAIGAYTSSKSTIYLDTEENSYADNFLGKTVYEWEKTASAASDLGIRV
VYARFGLVLGTGGGSFPVFEKLFRTYTGGKFGSGKQWYSWIHVDDVVRAILFIFDHEQIDGVVNFTAPHPVQEKKFAERL
GKKMHKPYKTPVPKKIIKFILGERAVTILDSQRAYPQKLMSNHFEFRFQTLQEALDDLVD

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=305, Percent_Identity=29.5081967213115, Blast_Score=155, Evalue=6e-38,
Organism=Escherichia coli, GI1788642, Length=301, Percent_Identity=35.5481727574751, Blast_Score=194, Evalue=6e-51,
Organism=Drosophila melanogaster, GI28573846, Length=300, Percent_Identity=28.3333333333333, Blast_Score=140, Evalue=9e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 34170; Mature: 34170

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILLTGATGFIGDHLVHELEKSDHELYILTRQKLQNRANVHYIEWLNDDKLPNLDDLPV
CEEEEECCCHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCEEEEEECCCCCCCCCCCCCH
DICINFAGAGLMDEKWTYDRKKVIVNSRIEATSALLSIVKKMKSKPKLWINASAIGAYTS
HHEEECCCCCCCCCCCCCCHHHEEECCHHHHHHHHHHHHHHHCCCCCEEEEEHHHEEEEC
SKSTIYLDTEENSYADNFLGKTVYEWEKTASAASDLGIRVVYARFGLVLGTGGGSFPVFE
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCEEEECCCCCCHHHH
KLFRTYTGGKFGSGKQWYSWIHVDDVVRAILFIFDHEQIDGVVNFTAPHPVQEKKFAERL
HHHHHHCCCCCCCCCHHHEEECHHHHHHHHHHHHCHHHHCCEEEECCCCCCHHHHHHHHH
GKKMHKPYKTPVPKKIIKFILGERAVTILDSQRAYPQKLMSNHFEFRFQTLQEALDDLVD
HHHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNILLTGATGFIGDHLVHELEKSDHELYILTRQKLQNRANVHYIEWLNDDKLPNLDDLPV
CEEEEECCCHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCEEEEEECCCCCCCCCCCCCH
DICINFAGAGLMDEKWTYDRKKVIVNSRIEATSALLSIVKKMKSKPKLWINASAIGAYTS
HHEEECCCCCCCCCCCCCCHHHEEECCHHHHHHHHHHHHHHHCCCCCEEEEEHHHEEEEC
SKSTIYLDTEENSYADNFLGKTVYEWEKTASAASDLGIRVVYARFGLVLGTGGGSFPVFE
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCEEEECCCCCCHHHH
KLFRTYTGGKFGSGKQWYSWIHVDDVVRAILFIFDHEQIDGVVNFTAPHPVQEKKFAERL
HHHHHHCCCCCCCCCHHHEEECHHHHHHHHHHHHCHHHHCCEEEECCCCCCHHHHHHHHH
GKKMHKPYKTPVPKKIIKFILGERAVTILDSQRAYPQKLMSNHFEFRFQTLQEALDDLVD
HHHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA