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The map label for this gene is ygaE [H]

Identifier: 116873120

GI number: 116873120

Start: 1727841

End: 1728929

Strand: Direct

Name: ygaE [H]

Synonym: lwe1704

Alternate gene names: 116873120

Gene position: 1727841-1728929 (Clockwise)

Preceding gene: 116873119

Following gene: 116873124

Centisome position: 61.4

GC content: 34.25

Gene sequence:

>1089_bases
ATGAAATTCGGAGCTAGAATTTTGAAAACTGGTATTGCAATCACCTTGGCGTTATTCATCGCTCAGCTTTGCAATTCACC
CTCTCCAACTCTGGCAGGCATTTCCGCCGTTTTTGCTATCCAACCTTCTATTTATAGGTCCTATCGAACTATTTTAGAAC
GTGCACAAGGAAACATTATTGGAGCTCTTATCGCCATTATTTTTGGACTTTATATTGGTAATGATTTTATTTTAATTGGA
GTTGCCGCCATCATCTGTGTTGCTTTATTGATGCAATTTCGTTTGGAAAATACGATTGGCCTTGCTGTAGTAACACTTAT
TATCGTCATGGATTCTCCAGGTAACGACTTTTTAGAAATCGCACTTATTCGTTTTGGCACGATTATGCTAGGCTTACTTG
CTGCATTTATCGTCAATTTATTCTTTTTACCGCCTAAATATGAAGTTTCTTTGTTTCAACTAATTTATAATACGAATAGC
GAAATTGTGCGTTGGATTAAATTAAATCTTCGGCACGCTGCTGACTTTCCCCTTCTAAAAAAAGATATGGAATGGATGCA
AAAGCAGTTAAATCAGACTCGTAACTTATATGGATTATATCGAGAAGAGCGAACTTTCTTGAAGAAAAATGCTGTCTCTA
AAGGCCGGAAAATTGCTGTATATAGACAAATGTTGCTTTGCTCTCAAAAGGGTTTTGAACTTTTGAAAATCCAACACCGT
TATGAAAATGATTATTTGCAACTTCCGCCAGATAAACAAGAATTGATTAGACAACATATTGATTATTTAACAGATAAACA
TGAACAATTACTGCTAACGTATATTGACAAAGTTTCTATTGATCTTGATTATGTAGAGTCTCATTTAGCACAAGATCCCC
AAGATTTAATGCAACTCTTCCTACGCGAAATGGAAGAAACTGAAAAAGATGAGTATGAAGATATGATGGATAAATATCAT
TTAATGCGTATTATTGCATCCATCTTTGCCTACCAAGAAACAATCGATTATCTAGAAAAAATAATTCATAGCTTTAAACT
TAGACATACAGATGAAAACCAGATCGATATTAATGTAAATGAAGAATAA

Upstream 100 bases:

>100_bases
ATTGCTTTATAAACTGACGATAAACGTTATAATAGAAGAAGAATGAGCGGGAATAGTTCAATATCCCGCTCAAATAGTCT
ATAGAAAGGAATAACCTTCC

Downstream 100 bases:

>100_bases
AAAAACGAGCTTGGAGATAAACTCCAAAGCTCGTTTTTTTAACGGTATTCTTTATACTTTTCATACCAAATGTCAATGTA
GTCAGGAGAAAATGGACCTT

Product: putative secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKFGARILKTGIAITLALFIAQLCNSPSPTLAGISAVFAIQPSIYRSYRTILERAQGNIIGALIAIIFGLYIGNDFILIG
VAAIICVALLMQFRLENTIGLAVVTLIIVMDSPGNDFLEIALIRFGTIMLGLLAAFIVNLFFLPPKYEVSLFQLIYNTNS
EIVRWIKLNLRHAADFPLLKKDMEWMQKQLNQTRNLYGLYREERTFLKKNAVSKGRKIAVYRQMLLCSQKGFELLKIQHR
YENDYLQLPPDKQELIRQHIDYLTDKHEQLLLTYIDKVSIDLDYVESHLAQDPQDLMQLFLREMEETEKDEYEDMMDKYH
LMRIIASIFAYQETIDYLEKIIHSFKLRHTDENQIDINVNEE

Sequences:

>Translated_362_residues
MKFGARILKTGIAITLALFIAQLCNSPSPTLAGISAVFAIQPSIYRSYRTILERAQGNIIGALIAIIFGLYIGNDFILIG
VAAIICVALLMQFRLENTIGLAVVTLIIVMDSPGNDFLEIALIRFGTIMLGLLAAFIVNLFFLPPKYEVSLFQLIYNTNS
EIVRWIKLNLRHAADFPLLKKDMEWMQKQLNQTRNLYGLYREERTFLKKNAVSKGRKIAVYRQMLLCSQKGFELLKIQHR
YENDYLQLPPDKQELIRQHIDYLTDKHEQLLLTYIDKVSIDLDYVESHLAQDPQDLMQLFLREMEETEKDEYEDMMDKYH
LMRIIASIFAYQETIDYLEKIIHSFKLRHTDENQIDINVNEE
>Mature_362_residues
MKFGARILKTGIAITLALFIAQLCNSPSPTLAGISAVFAIQPSIYRSYRTILERAQGNIIGALIAIIFGLYIGNDFILIG
VAAIICVALLMQFRLENTIGLAVVTLIIVMDSPGNDFLEIALIRFGTIMLGLLAAFIVNLFFLPPKYEVSLFQLIYNTNS
EIVRWIKLNLRHAADFPLLKKDMEWMQKQLNQTRNLYGLYREERTFLKKNAVSKGRKIAVYRQMLLCSQKGFELLKIQHR
YENDYLQLPPDKQELIRQHIDYLTDKHEQLLLTYIDKVSIDLDYVESHLAQDPQDLMQLFLREMEETEKDEYEDMMDKYH
LMRIIASIFAYQETIDYLEKIIHSFKLRHTDENQIDINVNEE

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0421 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010343 [H]

Pfam domain/function: PF06081 DUF939 [H]

EC number: NA

Molecular weight: Translated: 42026; Mature: 42026

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFGARILKTGIAITLALFIAQLCNSPSPTLAGISAVFAIQPSIYRSYRTILERAQGNII
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCHHH
GALIAIIFGLYIGNDFILIGVAAIICVALLMQFRLENTIGLAVVTLIIVMDSPGNDFLEI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ALIRFGTIMLGLLAAFIVNLFFLPPKYEVSLFQLIYNTNSEIVRWIKLNLRHAADFPLLK
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
KDMEWMQKQLNQTRNLYGLYREERTFLKKNAVSKGRKIAVYRQMLLCSQKGFELLKIQHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHH
YENDYLQLPPDKQELIRQHIDYLTDKHEQLLLTYIDKVSIDLDYVESHLAQDPQDLMQLF
HCCCCEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHH
LREMEETEKDEYEDMMDKYHLMRIIASIFAYQETIDYLEKIIHSFKLRHTDENQIDINVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
EE
CC
>Mature Secondary Structure
MKFGARILKTGIAITLALFIAQLCNSPSPTLAGISAVFAIQPSIYRSYRTILERAQGNII
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCHHH
GALIAIIFGLYIGNDFILIGVAAIICVALLMQFRLENTIGLAVVTLIIVMDSPGNDFLEI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ALIRFGTIMLGLLAAFIVNLFFLPPKYEVSLFQLIYNTNSEIVRWIKLNLRHAADFPLLK
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH
KDMEWMQKQLNQTRNLYGLYREERTFLKKNAVSKGRKIAVYRQMLLCSQKGFELLKIQHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHH
YENDYLQLPPDKQELIRQHIDYLTDKHEQLLLTYIDKVSIDLDYVESHLAQDPQDLMQLF
HCCCCEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHH
LREMEETEKDEYEDMMDKYHLMRIIASIFAYQETIDYLEKIIHSFKLRHTDENQIDINVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
EE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]