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The map label for this gene is yngC [H]

Identifier: 116872929

GI number: 116872929

Start: 1508154

End: 1508780

Strand: Direct

Name: yngC [H]

Synonym: lwe1513

Alternate gene names: 116872929

Gene position: 1508154-1508780 (Clockwise)

Preceding gene: 116872922

Following gene: 116872936

Centisome position: 53.59

GC content: 37.0

Gene sequence:

>627_bases
ATGTTACATACGTTAATACAAAGTTTGCAAGATTTCACGATGTGGTTAGTAGATGCTCTTGGCCACTGGGGAATTTTTCT
TGGAATGCTCATCGAAAGTGTTTGCATACCTCTTCCAAGTGAGGTCATTATGCTATTTGGCGGATTTATGGCTGAGGCTG
GGCAGTTAAATTTTTGGTTGGTTGTATTTGCTGGTATTGCTGGGAATTTAGTTGGTTCACTCATCGCCTACTACATTGGT
AAATTCGGTGGAAGAGCTTTAGTGTTAAAATTTGGTAAGTATATATTCTTAAATGTCAAACATCTAGATAAAGCTGAACT
TTGGTTTGGACGCTACGGAGCAAGAGCTGTTTTCTTCGGGCGCGTATTACCAGTTATTAGAACATTTATTTCATTACCGG
CTGGTATTGCTAAAATGAATGTTTGGAAATTTGTTATATATACAATCTTAGGCTGTATCCCGTGGAACATTTTTCTTACG
TGGCTCGGTTATTCATTAGGTTCCAATTGGAGTGTTGTCGAAAAATATACGCGACCAATTAGCTACTTAATGTTAGCTCT
GGTTATTGCAATCGTCATATATCTTGCTTATAAAGTATTAAATAAAAGGGCTAGAAACGCAAAATAA

Upstream 100 bases:

>100_bases
TGTTTTTTCGGTATAATAAGTAGCGTGATTTAACGAACAAGACAGAATCAGTCAAGGACTTTTTTCTGCCATTTAAATAT
AGATTGAAGGAGTCTTTTGA

Downstream 100 bases:

>100_bases
AAAGCACGTCTTGACCATATTCGTCAAGACATGCTTTTTGTTTTATTCTTCGTCTTCATCAGCTAGGAATGTTGCAAGAA
TTTCTTCAATCATATCCCAC

Product: DedA family membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MLHTLIQSLQDFTMWLVDALGHWGIFLGMLIESVCIPLPSEVIMLFGGFMAEAGQLNFWLVVFAGIAGNLVGSLIAYYIG
KFGGRALVLKFGKYIFLNVKHLDKAELWFGRYGARAVFFGRVLPVIRTFISLPAGIAKMNVWKFVIYTILGCIPWNIFLT
WLGYSLGSNWSVVEKYTRPISYLMLALVIAIVIYLAYKVLNKRARNAK

Sequences:

>Translated_208_residues
MLHTLIQSLQDFTMWLVDALGHWGIFLGMLIESVCIPLPSEVIMLFGGFMAEAGQLNFWLVVFAGIAGNLVGSLIAYYIG
KFGGRALVLKFGKYIFLNVKHLDKAELWFGRYGARAVFFGRVLPVIRTFISLPAGIAKMNVWKFVIYTILGCIPWNIFLT
WLGYSLGSNWSVVEKYTRPISYLMLALVIAIVIYLAYKVLNKRARNAK
>Mature_208_residues
MLHTLIQSLQDFTMWLVDALGHWGIFLGMLIESVCIPLPSEVIMLFGGFMAEAGQLNFWLVVFAGIAGNLVGSLIAYYIG
KFGGRALVLKFGKYIFLNVKHLDKAELWFGRYGARAVFFGRVLPVIRTFISLPAGIAKMNVWKFVIYTILGCIPWNIFLT
WLGYSLGSNWSVVEKYTRPISYLMLALVIAIVIYLAYKVLNKRARNAK

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=179, Percent_Identity=25.6983240223464, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23483; Mature: 23483

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHTLIQSLQDFTMWLVDALGHWGIFLGMLIESVCIPLPSEVIMLFGGFMAEAGQLNFWL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHH
VVFAGIAGNLVGSLIAYYIGKFGGRALVLKFGKYIFLNVKHLDKAELWFGRYGARAVFFG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHEEEECCCCHHHHHHHHHCHHHHHHH
RVLPVIRTFISLPAGIAKMNVWKFVIYTILGCIPWNIFLTWLGYSLGSNWSVVEKYTRPI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SYLMLALVIAIVIYLAYKVLNKRARNAK
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLHTLIQSLQDFTMWLVDALGHWGIFLGMLIESVCIPLPSEVIMLFGGFMAEAGQLNFWL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHH
VVFAGIAGNLVGSLIAYYIGKFGGRALVLKFGKYIFLNVKHLDKAELWFGRYGARAVFFG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHEEEECCCCHHHHHHHHHCHHHHHHH
RVLPVIRTFISLPAGIAKMNVWKFVIYTILGCIPWNIFLTWLGYSLGSNWSVVEKYTRPI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SYLMLALVIAIVIYLAYKVLNKRARNAK
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]