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The map label for this gene is tcsA [H]

Identifier: 116872820

GI number: 116872820

Start: 1392658

End: 1393731

Strand: Direct

Name: tcsA [H]

Synonym: lwe1404

Alternate gene names: 116872820

Gene position: 1392658-1393731 (Clockwise)

Preceding gene: 116872818

Following gene: 116872821

Centisome position: 49.49

GC content: 37.71

Gene sequence:

>1074_bases
GTGAAAAAGCGTACATTTGCTTTCGCACTATCAATGATTATTGCTTCTGGCGTTATCCTAGGTGCTTGTGGTTCAGGCAG
CGACGATAAAAAAAGTGGCGATGATAAGAGCAGTAAAGATTTTACAGTAGCAATGGTTACAGATACTGGTGGCGTTGATG
ACCGTTCGTTTAACCAATCAGCATGGGAAGGCTTACAAAAATTTGGTAAAGCTAACGACATGAAAAAAGGTACAGATGGT
TATAACTACTTGCAATCAGCTTCTGAAGCAGACTACAAAACAAACTTAAACACTGCTGTTCGTAGCGATTATGATTTAAT
TTATGGAATTGGTTACAAACTGAAAGATGCAATTGAAGAAGTTTCTAAACAAAAACCTAAAAATCAATTCGCTATTGTTG
ATGACACAATTGATGACCGTGATAATGTAGTAAGTATTGGATTTAAAGATAACGATGGTTCTTACCTAGTTGGTGTTGTA
GCCGGCTTAACAACAAAAACAAACAAAGTTGGATTTGTTGGTGGAGTAAAAGGAACAGTTATCGACCGTTTTGAAGCTGG
TTTTACTGCTGGCGTAAAAGCTGTTAATCCTAAAGCACAAATTGATGTTCAATATGCAAACGATTTCGCTAAAGCAGACA
AAGGACAACAAATCGCTTCTTCCATGTATTCTAGTGGAGTAGATGTAATTTTCCATGCTGCTGGTGGTACTGGTAACGGT
GTCTTTGCAGAAGCTAAAAACTTGAAGAAAAAAGATCCTAGCCGTGCTGTTTGGGTAATCGGTGTTGACCGTGACCAATG
GGACGAAGGAAAAGTTACAGCAAACGATGGCAAAGATTACAATGTAACTCTTACATCTGAAATCAAACGTGTTGATATTG
CTGTAGAAGACCTTGCTACTCGTGCAAAAGCTGGAGATTTCCCTGGTGGAACAAAAATTGAATATGGTCTTGACAAAAAT
GCTGTAGGGCTTTCTGATCATCAAGACAATATTTCTAAAGATGTTTTAGCTAAAGTAGAAGAATATAAACAAAAAATCGT
TGATGGGGACGTTAAAGTTCCTGAAAAACCTTGA

Upstream 100 bases:

>100_bases
TTTCTGAAAAAGGGACCATACATAATTTTAATACGCGCCTGAATGTTTGTTTTGACAGATAGCTCTGACTAACATTATAT
CTCTCGGGAGGGGTTTTAAG

Downstream 100 bases:

>100_bases
TTTTATAGTTATAAAAACTGAGTAATACGAAGGAAGTAAAACCTTTTATGAAAGTCGGTATTAATTGTACCGGCTTTCAT
AAAAAAATAATTTGTAAGCG

Product: CD4+ T cell-stimulating antigen, lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MKKRTFAFALSMIIASGVILGACGSGSDDKKSGDDKSSKDFTVAMVTDTGGVDDRSFNQSAWEGLQKFGKANDMKKGTDG
YNYLQSASEADYKTNLNTAVRSDYDLIYGIGYKLKDAIEEVSKQKPKNQFAIVDDTIDDRDNVVSIGFKDNDGSYLVGVV
AGLTTKTNKVGFVGGVKGTVIDRFEAGFTAGVKAVNPKAQIDVQYANDFAKADKGQQIASSMYSSGVDVIFHAAGGTGNG
VFAEAKNLKKKDPSRAVWVIGVDRDQWDEGKVTANDGKDYNVTLTSEIKRVDIAVEDLATRAKAGDFPGGTKIEYGLDKN
AVGLSDHQDNISKDVLAKVEEYKQKIVDGDVKVPEKP

Sequences:

>Translated_357_residues
MKKRTFAFALSMIIASGVILGACGSGSDDKKSGDDKSSKDFTVAMVTDTGGVDDRSFNQSAWEGLQKFGKANDMKKGTDG
YNYLQSASEADYKTNLNTAVRSDYDLIYGIGYKLKDAIEEVSKQKPKNQFAIVDDTIDDRDNVVSIGFKDNDGSYLVGVV
AGLTTKTNKVGFVGGVKGTVIDRFEAGFTAGVKAVNPKAQIDVQYANDFAKADKGQQIASSMYSSGVDVIFHAAGGTGNG
VFAEAKNLKKKDPSRAVWVIGVDRDQWDEGKVTANDGKDYNVTLTSEIKRVDIAVEDLATRAKAGDFPGGTKIEYGLDKN
AVGLSDHQDNISKDVLAKVEEYKQKIVDGDVKVPEKP
>Mature_357_residues
MKKRTFAFALSMIIASGVILGACGSGSDDKKSGDDKSSKDFTVAMVTDTGGVDDRSFNQSAWEGLQKFGKANDMKKGTDG
YNYLQSASEADYKTNLNTAVRSDYDLIYGIGYKLKDAIEEVSKQKPKNQFAIVDDTIDDRDNVVSIGFKDNDGSYLVGVV
AGLTTKTNKVGFVGGVKGTVIDRFEAGFTAGVKAVNPKAQIDVQYANDFAKADKGQQIASSMYSSGVDVIFHAAGGTGNG
VFAEAKNLKKKDPSRAVWVIGVDRDQWDEGKVTANDGKDYNVTLTSEIKRVDIAVEDLATRAKAGDFPGGTKIEYGLDKN
AVGLSDHQDNISKDVLAKVEEYKQKIVDGDVKVPEKP

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 38373; Mature: 38373

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRTFAFALSMIIASGVILGACGSGSDDKKSGDDKSSKDFTVAMVTDTGGVDDRSFNQS
CCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHH
AWEGLQKFGKANDMKKGTDGYNYLQSASEADYKTNLNTAVRSDYDLIYGIGYKLKDAIEE
HHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCEEEECCHHHHHHHHH
VSKQKPKNQFAIVDDTIDDRDNVVSIGFKDNDGSYLVGVVAGLTTKTNKVGFVGGVKGTV
HHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEECCCCCHH
IDRFEAGFTAGVKAVNPKAQIDVQYANDFAKADKGQQIASSMYSSGVDVIFHAAGGTGNG
HHHHHCCHHCCCEECCCCCEEEEEEHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCCC
VFAEAKNLKKKDPSRAVWVIGVDRDQWDEGKVTANDGKDYNVTLTSEIKRVDIAVEDLAT
EEHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEECCCCEEEEEECCCCEEHHHHHHHHHH
RAKAGDFPGGTKIEYGLDKNAVGLSDHQDNISKDVLAKVEEYKQKIVDGDVKVPEKP
HHHCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKRTFAFALSMIIASGVILGACGSGSDDKKSGDDKSSKDFTVAMVTDTGGVDDRSFNQS
CCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHH
AWEGLQKFGKANDMKKGTDGYNYLQSASEADYKTNLNTAVRSDYDLIYGIGYKLKDAIEE
HHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCEEEECCHHHHHHHHH
VSKQKPKNQFAIVDDTIDDRDNVVSIGFKDNDGSYLVGVVAGLTTKTNKVGFVGGVKGTV
HHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEECCCCCHH
IDRFEAGFTAGVKAVNPKAQIDVQYANDFAKADKGQQIASSMYSSGVDVIFHAAGGTGNG
HHHHHCCHHCCCEECCCCCEEEEEEHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCCCC
VFAEAKNLKKKDPSRAVWVIGVDRDQWDEGKVTANDGKDYNVTLTSEIKRVDIAVEDLAT
EEHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEECCCCEEEEEECCCCEEHHHHHHHHHH
RAKAGDFPGGTKIEYGLDKNAVGLSDHQDNISKDVLAKVEEYKQKIVDGDVKVPEKP
HHHCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]