| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is bfmBAA [H]
Identifier: 116872803
GI number: 116872803
Start: 1374991
End: 1375986
Strand: Direct
Name: bfmBAA [H]
Synonym: lwe1387
Alternate gene names: 116872803
Gene position: 1374991-1375986 (Clockwise)
Preceding gene: 116872802
Following gene: 116872804
Centisome position: 48.86
GC content: 39.86
Gene sequence:
>996_bases ATGACTTTAAAAGAAGCAGGTTTAACAGAAGATAAATTAATTAAAATGTATGAAACAATGTTAATGGCAAGAAGACTTGA TGAGCGGATGTGGTTGTTAAACCGTTCAGGGAAAATCCCTTTCACCATTTCTGGGCAAGGACAAGAAACCGCACAAATTG GTGCTGCATTTGCCTTTGATTTAGATAAAGATTATGCATTACCGTATTATCGTGATTTGGCAGTTGTGTTATCGTTTGGG ATGACGGCGAAAGATATTATGCTATCAGCCTTTGCTAAAGCGGAAGATCCAAACTCTGGCGGACGTCAAATGCCAGCTCA TTTTGGTCAAAAATCAAATCGTATCGTCACTCAAAGTTCACCTGTAACAACACAATTTCCGCATGCAGCAGGGATTGGTC TTGCAGCAAAAATGGCTGGGGATAAAATTGCGATTTATGCTTCTACAGGTGAAGGGTCTTCTAACCAAGGAGATTTCCAT GAAGGAATCAACTTCGCATCTGTACATAAGTTGCCAGTTGTTTTCGTCATCCACAACAATAAGTACGCTATTTCAGTACC AGCATCCAAGCAGTATGCAGCAGAAAAACTATCAGACCGAGCAATTGGTTATGGTATTCCTGGTGAACGCGTGGATGGTA CAAATATGAGTGAAGTATATGGAGCCTTTAAACGCGCAGCAGATCGTGCACGAAACGGCGAAGGGCCCACACTAATTGAA ACCGTTTCTTATCGCTTTACACCGCACTCCTCAGATGATGACGATAGTAGTTATCGTTCTAGAGAAGAAGTAGATGAAGC GAAAGTAAAAGATCCACTGAAAATCTTCCAAAGAGAATTGCTAGAAGAAGGTTATTTAACAGAAGAAAAAATCGCTGAAA TTGAAAAAAATATTGCTAAAGAAGTTAATGAAGCAACTGATTATGCGGAAAGTGCAGCATACGCTGAACCAGAATCATCT TTACTTTATGTATATGATGAAGAAGCGAATAGCTGA
Upstream 100 bases:
>100_bases TCACCCGCACCCAACTTTAGCAGAAAGTTTTAGAGAAGCTGCCCTTGCTGTGGATGGTAACGCGATTCATGGTTAATACA GCTTTAAAGGAGGAACTAAA
Downstream 100 bases:
>100_bases TTAGGAGGGAATTTGAATGCCAGTCATTTCATATATTGATGCAATAACAATGGCGCTTAAAGAAGAAATGGAGCGCGATG ATAAAGTATTTATTTTAGGG
Product: branched-chain alpha-keto acid dehydrogenase E1 (2-oxoisovalerate dehydrogenase alpha subunit)
Products: NA
Alternate protein names: Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; BCKDH E1-alpha [H]
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MTLKEAGLTEDKLIKMYETMLMARRLDERMWLLNRSGKIPFTISGQGQETAQIGAAFAFDLDKDYALPYYRDLAVVLSFG MTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSSPVTTQFPHAAGIGLAAKMAGDKIAIYASTGEGSSNQGDFH EGINFASVHKLPVVFVIHNNKYAISVPASKQYAAEKLSDRAIGYGIPGERVDGTNMSEVYGAFKRAADRARNGEGPTLIE TVSYRFTPHSSDDDDSSYRSREEVDEAKVKDPLKIFQRELLEEGYLTEEKIAEIEKNIAKEVNEATDYAESAAYAEPESS LLYVYDEEANS
Sequences:
>Translated_331_residues MTLKEAGLTEDKLIKMYETMLMARRLDERMWLLNRSGKIPFTISGQGQETAQIGAAFAFDLDKDYALPYYRDLAVVLSFG MTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSSPVTTQFPHAAGIGLAAKMAGDKIAIYASTGEGSSNQGDFH EGINFASVHKLPVVFVIHNNKYAISVPASKQYAAEKLSDRAIGYGIPGERVDGTNMSEVYGAFKRAADRARNGEGPTLIE TVSYRFTPHSSDDDDSSYRSREEVDEAKVKDPLKIFQRELLEEGYLTEEKIAEIEKNIAKEVNEATDYAESAAYAEPESS LLYVYDEEANS >Mature_330_residues TLKEAGLTEDKLIKMYETMLMARRLDERMWLLNRSGKIPFTISGQGQETAQIGAAFAFDLDKDYALPYYRDLAVVLSFGM TAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSSPVTTQFPHAAGIGLAAKMAGDKIAIYASTGEGSSNQGDFHE GINFASVHKLPVVFVIHNNKYAISVPASKQYAAEKLSDRAIGYGIPGERVDGTNMSEVYGAFKRAADRARNGEGPTLIET VSYRFTPHSSDDDDSSYRSREEVDEAKVKDPLKIFQRELLEEGYLTEEKIAEIEKNIAKEVNEATDYAESAAYAEPESSL LYVYDEEANS
Specific function: The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components:branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltran
COG id: COG1071
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BCKDHA family [H]
Homologues:
Organism=Homo sapiens, GI11386135, Length=323, Percent_Identity=36.2229102167183, Blast_Score=192, Evalue=3e-49, Organism=Homo sapiens, GI258645172, Length=323, Percent_Identity=36.2229102167183, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI4885543, Length=316, Percent_Identity=31.3291139240506, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI4505685, Length=316, Percent_Identity=29.746835443038, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI291084742, Length=316, Percent_Identity=29.746835443038, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI291084744, Length=323, Percent_Identity=29.1021671826625, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI291084757, Length=167, Percent_Identity=34.7305389221557, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI86563357, Length=327, Percent_Identity=36.3914373088685, Blast_Score=194, Evalue=4e-50, Organism=Caenorhabditis elegans, GI86563355, Length=327, Percent_Identity=36.3914373088685, Blast_Score=194, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17536047, Length=320, Percent_Identity=30, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI32564172, Length=320, Percent_Identity=30, Blast_Score=132, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6321026, Length=318, Percent_Identity=30.188679245283, Blast_Score=130, Evalue=3e-31, Organism=Drosophila melanogaster, GI21355903, Length=295, Percent_Identity=31.1864406779661, Blast_Score=167, Evalue=7e-42, Organism=Drosophila melanogaster, GI24639740, Length=316, Percent_Identity=32.2784810126582, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI24639744, Length=316, Percent_Identity=32.2784810126582, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI28571106, Length=316, Percent_Identity=32.2784810126582, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI24639746, Length=268, Percent_Identity=31.7164179104478, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI24639748, Length=306, Percent_Identity=29.4117647058824, Blast_Score=110, Evalue=9e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001017 [H]
Pfam domain/function: PF00676 E1_dh [H]
EC number: =1.2.4.4 [H]
Molecular weight: Translated: 36506; Mature: 36375
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKEAGLTEDKLIKMYETMLMARRLDERMWLLNRSGKIPFTISGQGQETAQIGAAFAFD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHEEEEEE LDKDYALPYYRDLAVVLSFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSS CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEEEECCC PVTTQFPHAAGIGLAAKMAGDKIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNN CCCCCCCCHHCCCHHEEECCCEEEEEEECCCCCCCCCCHHHCCCCCEEECCEEEEEEECC KYAISVPASKQYAAEKLSDRAIGYGIPGERVDGTNMSEVYGAFKRAADRARNGEGPTLIE EEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE TVSYRFTPHSSDDDDSSYRSREEVDEAKVKDPLKIFQRELLEEGYLTEEKIAEIEKNIAK EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH EVNEATDYAESAAYAEPESSLLYVYDEEANS HHHHHHHHHHHHCCCCCCCCEEEEECCCCCC >Mature Secondary Structure TLKEAGLTEDKLIKMYETMLMARRLDERMWLLNRSGKIPFTISGQGQETAQIGAAFAFD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHEEEEEE LDKDYALPYYRDLAVVLSFGMTAKDIMLSAFAKAEDPNSGGRQMPAHFGQKSNRIVTQSS CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEEEECCC PVTTQFPHAAGIGLAAKMAGDKIAIYASTGEGSSNQGDFHEGINFASVHKLPVVFVIHNN CCCCCCCCHHCCCHHEEECCCEEEEEEECCCCCCCCCCHHHCCCCCEEECCEEEEEEECC KYAISVPASKQYAAEKLSDRAIGYGIPGERVDGTNMSEVYGAFKRAADRARNGEGPTLIE EEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE TVSYRFTPHSSDDDDSSYRSREEVDEAKVKDPLKIFQRELLEEGYLTEEKIAEIEKNIAK EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH EVNEATDYAESAAYAEPESSLLYVYDEEANS HHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8504804; 8969508; 9384377 [H]