| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is yqhY [H]
Identifier: 116872789
GI number: 116872789
Start: 1361421
End: 1361828
Strand: Direct
Name: yqhY [H]
Synonym: lwe1373
Alternate gene names: 116872789
Gene position: 1361421-1361828 (Clockwise)
Preceding gene: 116872788
Following gene: 116872790
Centisome position: 48.38
GC content: 36.52
Gene sequence:
>408_bases ATGGCTTACACAAAAGATTTGAGAAAACAAAATGATGCACCACTTGGTAAAATAGAGATTGCACCTGAAGTAATTGGCGT CATTGCTGGTCTTGCTGCAAGTGAAATTGAAAATGTAGCTTATATGCAAGGTGGATTCGCTACAGAAATGCGCGAAAAGT TCAGTGGTGCTGTCAACTACCGTAAAGGCGTCAAAGTGGAATTAACAGAAGAAGGAATTCTAATCGAACTTTATTGTTCT GTATTATTCGGTGCAACTATTCCACTTGTTGCTCAAAATATTCAAGATGCTGTCCGAGATACAATTTTCAATATGACAGG TTTGAATGTTCTTGAAATCAATGTGCATATCGTTGGCGTACAATTTGAAAAAACAGAAACACTTTCCTTCGATGATTTTG AACTATAA
Upstream 100 bases:
>100_bases TTTACGTGTGTTAGATAACGATGTATTCTTGTCAGGAGACTTTAATACTAAATTCTTGGAGCAAAATGATGTAATGAATC TTTCGAAGGAGGGCTAAAAA
Downstream 100 bases:
>100_bases AATTCAAGGAAAAAAAGGAGCAGCTTTAACATGAAAAGAAGAGAAGCGCGCGAGAAAGCACTTCAAGCATTATTCCAAAT CGAACTAAATGAAATGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MAYTKDLRKQNDAPLGKIEIAPEVIGVIAGLAASEIENVAYMQGGFATEMREKFSGAVNYRKGVKVELTEEGILIELYCS VLFGATIPLVAQNIQDAVRDTIFNMTGLNVLEINVHIVGVQFEKTETLSFDDFEL
Sequences:
>Translated_135_residues MAYTKDLRKQNDAPLGKIEIAPEVIGVIAGLAASEIENVAYMQGGFATEMREKFSGAVNYRKGVKVELTEEGILIELYCS VLFGATIPLVAQNIQDAVRDTIFNMTGLNVLEINVHIVGVQFEKTETLSFDDFEL >Mature_134_residues AYTKDLRKQNDAPLGKIEIAPEVIGVIAGLAASEIENVAYMQGGFATEMREKFSGAVNYRKGVKVELTEEGILIELYCSV LFGATIPLVAQNIQDAVRDTIFNMTGLNVLEINVHIVGVQFEKTETLSFDDFEL
Specific function: Unknown
COG id: COG1302
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asp23 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005531 [H]
Pfam domain/function: PF03780 DUF322 [H]
EC number: NA
Molecular weight: Translated: 14859; Mature: 14728
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYTKDLRKQNDAPLGKIEIAPEVIGVIAGLAASEIENVAYMQGGFATEMREKFSGAVNY CCCCHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC RKGVKVELTEEGILIELYCSVLFGATIPLVAQNIQDAVRDTIFNMTGLNVLEINVHIVGV CCCCEEEECCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEE QFEKTETLSFDDFEL EECCCCCCCCCCCCC >Mature Secondary Structure AYTKDLRKQNDAPLGKIEIAPEVIGVIAGLAASEIENVAYMQGGFATEMREKFSGAVNY CCCHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC RKGVKVELTEEGILIELYCSVLFGATIPLVAQNIQDAVRDTIFNMTGLNVLEINVHIVGV CCCCEEEECCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEE QFEKTETLSFDDFEL EECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]