Click here to switch to the map view.

The map label for this gene is 116872628

Identifier: 116872628

GI number: 116872628

Start: 1217765

End: 1218244

Strand: Direct

Name: 116872628

Synonym: lwe1212

Alternate gene names: NA

Gene position: 1217765-1218244 (Clockwise)

Preceding gene: 116872627

Following gene: 116872629

Centisome position: 43.27

GC content: 32.29

Gene sequence:

>480_bases
ATGTCAACATTATACTCAATTCAAGGAAAATATCAACAGTTGTTAAATTTAGCAGAACAGCTTGATCCAGAATTACTAAA
AGATACCCTTGAAAGTATCGATGATGAACTAGAAACGAAAGCTGAAAACGTAGCATTTGTTATTAAAGAGCTAGAAGGTC
AATCGCTAATCTTAGAAAAAGAAACAAAGCGTTTAGCTGAACGGAAAAATACTATTAATAATAATGTGAAGCGACTGAAA
CAATCGTTATTTGATGCAATGATAACTGCCAATAAGCAAAAAATTAAAACAAACTTATTCACATTAGATATCCGGAAGAA
CCCGCCAAGCCTCATTGTAGAAGACGAAAGCAAACTGCTGAATTACCTGATTGAACAACCAAAAAAATTAGATAAAACAA
AATTAGGCGATGATTTGAAGAAAGGTATTGAGGTACCAGGTGCGAAAATTATTCAAACAGAAAGATTGCAAATAAGATAA

Upstream 100 bases:

>100_bases
GCAGGTAAAGCGGAATTTAATGAGGCGAACAACGAAAAATGGTTTTCTGCAACAAATGGAAAAATAACTGCTGTTGCATT
TTTGAAAGGGGATGATTAAA

Downstream 100 bases:

>100_bases
GGAGGGGTTTTGTTGGAATTTATTCAATCGGAAGAAATGAAGAGGTCAGAGTATTTTAATATTATGATTTATGCCAAACC
AGGTGCAGGTAAAACAACTA

Product: hypothetical protein

Products: NA

Alternate protein names: Siphovirus Superfamily

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSTLYSIQGKYQQLLNLAEQLDPELLKDTLESIDDELETKAENVAFVIKELEGQSLILEKETKRLAERKNTINNNVKRLK
QSLFDAMITANKQKIKTNLFTLDIRKNPPSLIVEDESKLLNYLIEQPKKLDKTKLGDDLKKGIEVPGAKIIQTERLQIR

Sequences:

>Translated_159_residues
MSTLYSIQGKYQQLLNLAEQLDPELLKDTLESIDDELETKAENVAFVIKELEGQSLILEKETKRLAERKNTINNNVKRLK
QSLFDAMITANKQKIKTNLFTLDIRKNPPSLIVEDESKLLNYLIEQPKKLDKTKLGDDLKKGIEVPGAKIIQTERLQIR
>Mature_158_residues
STLYSIQGKYQQLLNLAEQLDPELLKDTLESIDDELETKAENVAFVIKELEGQSLILEKETKRLAERKNTINNNVKRLKQ
SLFDAMITANKQKIKTNLFTLDIRKNPPSLIVEDESKLLNYLIEQPKKLDKTKLGDDLKKGIEVPGAKIIQTERLQIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18277; Mature: 18146

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLYSIQGKYQQLLNLAEQLDPELLKDTLESIDDELETKAENVAFVIKELEGQSLILEK
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHH
ETKRLAERKNTINNNVKRLKQSLFDAMITANKQKIKTNLFTLDIRKNPPSLIVEDESKLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCCCEEECCHHHHH
NYLIEQPKKLDKTKLGDDLKKGIEVPGAKIIQTERLQIR
HHHHHCHHHHHHHHCCHHHHHCCCCCCCCEEECCCCCCC
>Mature Secondary Structure 
STLYSIQGKYQQLLNLAEQLDPELLKDTLESIDDELETKAENVAFVIKELEGQSLILEK
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHH
ETKRLAERKNTINNNVKRLKQSLFDAMITANKQKIKTNLFTLDIRKNPPSLIVEDESKLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCCCCEEECCHHHHH
NYLIEQPKKLDKTKLGDDLKKGIEVPGAKIIQTERLQIR
HHHHHCHHHHHHHHCCHHHHHCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA