| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872618
Identifier: 116872618
GI number: 116872618
Start: 1212076
End: 1212813
Strand: Direct
Name: 116872618
Synonym: lwe1202
Alternate gene names: NA
Gene position: 1212076-1212813 (Clockwise)
Preceding gene: 116872617
Following gene: 116872619
Centisome position: 43.07
GC content: 34.69
Gene sequence:
>738_bases ATGAGTTATGAAAGAGGTGCAGGCGTGACACTAACAACAGAAACAATTAATAATTTAATCGGAATAAAAGAATCATATCA AGCGTCAGATGCGCTAATGAAAATATTGTTTGATAGAGAAAAACGAGAAGAGATATTTAAGCAGTTTTTACAACATGATA CGCATTTAGAAAAAGATTGGTTTCACGTCTATTTTGAAGAAGAGCATGCGAATAAAAAGAAATATGCACAAGATTTTACA CCAGCTGCAATAAGTAGCGTTGCATCGCAATTAGTAAGAGGATTAACAGATGGTCAGGGAGGAACAAGACTAGATGTTGC CGCTGGTACAGGTAGTTTAACGATTCGAAAATGGTATGAAGATTGCCTAAAATATTCGCCGTTTGATTATCTACCATCTA TGTATTTGTATCAATGTGAAGAATTATCAGATCGTGCGTTACCTTTCCTTCTTTTCAATTTATTAATTAGAGGAATGAAC GCAACAGTTATTCACGGGGATGCGCTAACAAGAGAAGCGAAACAAGTATATTTCATTCAAAACGATAAAGACGACTTATT GAATTTCAGCTCTTTCAACATCATGCCACACACTGAAACCATAGAGAAGGAATTTAATATTCAGAAATGGCTAGAACCAG TTATCGAACATATAGAAAGCCCACTTTCAGTAGCTGATAGATATTTAAATGAATTAGAAACAGAGGACGAAGAAGCATCA CAATTGAAACTTTTTTAG
Upstream 100 bases:
>100_bases AAAATTGGGAGTTGGAATACAGCACATCTGTAACAAACGATGTTCTTAGAAATTTAACACATGAACGACTGATTGAAAAG CTAGAAGAGATTAAGAATTT
Downstream 100 bases:
>100_bases GAGGGAGAACATGGCTAAGAAACAAAAAGAAATACTATTTTGTGATTACTTTGAAGAGTGGATTGAAGTGTATAAAGTTG GAGCAATTGCAAAAATAACA
Product: phage related methyltransferase, putative
Products: NA
Alternate protein names: Phage Related Methyltransferase; N-6 DNA Methylase; DNA Methylase
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSYERGAGVTLTTETINNLIGIKESYQASDALMKILFDREKREEIFKQFLQHDTHLEKDWFHVYFEEEHANKKKYAQDFT PAAISSVASQLVRGLTDGQGGTRLDVAAGTGSLTIRKWYEDCLKYSPFDYLPSMYLYQCEELSDRALPFLLFNLLIRGMN ATVIHGDALTREAKQVYFIQNDKDDLLNFSSFNIMPHTETIEKEFNIQKWLEPVIEHIESPLSVADRYLNELETEDEEAS QLKLF
Sequences:
>Translated_245_residues MSYERGAGVTLTTETINNLIGIKESYQASDALMKILFDREKREEIFKQFLQHDTHLEKDWFHVYFEEEHANKKKYAQDFT PAAISSVASQLVRGLTDGQGGTRLDVAAGTGSLTIRKWYEDCLKYSPFDYLPSMYLYQCEELSDRALPFLLFNLLIRGMN ATVIHGDALTREAKQVYFIQNDKDDLLNFSSFNIMPHTETIEKEFNIQKWLEPVIEHIESPLSVADRYLNELETEDEEAS QLKLF >Mature_244_residues SYERGAGVTLTTETINNLIGIKESYQASDALMKILFDREKREEIFKQFLQHDTHLEKDWFHVYFEEEHANKKKYAQDFTP AAISSVASQLVRGLTDGQGGTRLDVAAGTGSLTIRKWYEDCLKYSPFDYLPSMYLYQCEELSDRALPFLLFNLLIRGMNA TVIHGDALTREAKQVYFIQNDKDDLLNFSSFNIMPHTETIEKEFNIQKWLEPVIEHIESPLSVADRYLNELETEDEEASQ LKLF
Specific function: Unknown
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28384; Mature: 28253
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYERGAGVTLTTETINNLIGIKESYQASDALMKILFDREKREEIFKQFLQHDTHLEKDW CCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCC FHVYFEEEHANKKKYAQDFTPAAISSVASQLVRGLTDGQGGTRLDVAAGTGSLTIRKWYE EEEEEEHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHH DCLKYSPFDYLPSMYLYQCEELSDRALPFLLFNLLIRGMNATVIHGDALTREAKQVYFIQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHEEEEEE NDKDDLLNFSSFNIMPHTETIEKEFNIQKWLEPVIEHIESPLSVADRYLNELETEDEEAS CCHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHH QLKLF HCCCC >Mature Secondary Structure SYERGAGVTLTTETINNLIGIKESYQASDALMKILFDREKREEIFKQFLQHDTHLEKDW CCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCC FHVYFEEEHANKKKYAQDFTPAAISSVASQLVRGLTDGQGGTRLDVAAGTGSLTIRKWYE EEEEEEHHHCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHH DCLKYSPFDYLPSMYLYQCEELSDRALPFLLFNLLIRGMNATVIHGDALTREAKQVYFIQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHEEEEEE NDKDDLLNFSSFNIMPHTETIEKEFNIQKWLEPVIEHIESPLSVADRYLNELETEDEEAS CCHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHH QLKLF HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA