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The map label for this gene is int [H]

Identifier: 116872619

GI number: 116872619

Start: 1212824

End: 1213768

Strand: Direct

Name: int [H]

Synonym: lwe1203

Alternate gene names: 116872619

Gene position: 1212824-1213768 (Clockwise)

Preceding gene: 116872618

Following gene: 116872620

Centisome position: 43.1

GC content: 36.4

Gene sequence:

>945_bases
ATGGCTAAGAAACAAAAAGAAATACTATTTTGTGATTACTTTGAAGAGTGGATTGAAGTGTATAAAGTTGGAGCAATTGC
AAAAATAACACTAGCTAAATACTATAATGCAGCAAAACAACTTCGAGATATATGCCCAAAACTTTTCATCTCAGATTTTG
ACAGACGAGAATATCAACGAATTATTAACGTGTATGCTACAACGCATGAGAAACAAACAGTAAAAGATTTTCATCATCAT
GTAAAAGCGTGCATTAAAGATTTGTTTCACGATGGATTAATAGATAAAGACCCAACATATCGAGTGGTTATAAAAGGTGC
AGAACCGACACGAGCGAAAAAACGGAAATTCTTACAGAAAGAGGAGTTATCGAAGTTATTACAATCACTCGATACGAATG
AAATCGGATTTGGATGGTTCGTAATGCTCGTAGCTAAGACAGGAATGCGCTATGCGGAAGCTTTAGCTATTACTCCTGCT
GATTTTGATTGGACAGCACAGACTATATCTATCAACAAGACATGGGATTACAAATATAACAAGGGATTTGCTAAAACAAA
AACATTGTCGTCAGTAAGGACCATCAAAATAGACTGGCAAATCGTCGGGCAGTTCAAACCACTTATAAAAGATTTACCAG
AAAATGAACCCATTTTCGTTGAAAAATTTGGAGACGGCACTTACAAACGTCAATTCAATTCAACCATCAACAATTTTTTA
GCTGCTAAATGCAAAGAAACAGGCATTACACAGATTAGCTTTCACGCATTACGACATACGCATGCAAGCGTATTGCTGGC
AGAAGGTGTTTCGATTCATACGATTTCAGCACGATTAGGACATGCTGACGTAGGTGTCACACAAGAAACCTATGCGCATG
TGTTAGACGAATTACAAAAGAAAGATGATCAAAAAATGTTATCTGTTTTGATGCAGATTGCTTAG

Upstream 100 bases:

>100_bases
CATATAGAAAGCCCACTTTCAGTAGCTGATAGATATTTAAATGAATTAGAAACAGAGGACGAAGAAGCATCACAATTGAA
ACTTTTTTAGGAGGGAGAAC

Downstream 100 bases:

>100_bases
CGAGGTGATTAGATGCGAAAAAATTGGACGGATGAGGAAATTAGAATTTTGCAGAATAATTACGAATACGTAGACACTGA
AATAATAGCTAATTTTTTAA

Product: phage integrase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MAKKQKEILFCDYFEEWIEVYKVGAIAKITLAKYYNAAKQLRDICPKLFISDFDRREYQRIINVYATTHEKQTVKDFHHH
VKACIKDLFHDGLIDKDPTYRVVIKGAEPTRAKKRKFLQKEELSKLLQSLDTNEIGFGWFVMLVAKTGMRYAEALAITPA
DFDWTAQTISINKTWDYKYNKGFAKTKTLSSVRTIKIDWQIVGQFKPLIKDLPENEPIFVEKFGDGTYKRQFNSTINNFL
AAKCKETGITQISFHALRHTHASVLLAEGVSIHTISARLGHADVGVTQETYAHVLDELQKKDDQKMLSVLMQIA

Sequences:

>Translated_314_residues
MAKKQKEILFCDYFEEWIEVYKVGAIAKITLAKYYNAAKQLRDICPKLFISDFDRREYQRIINVYATTHEKQTVKDFHHH
VKACIKDLFHDGLIDKDPTYRVVIKGAEPTRAKKRKFLQKEELSKLLQSLDTNEIGFGWFVMLVAKTGMRYAEALAITPA
DFDWTAQTISINKTWDYKYNKGFAKTKTLSSVRTIKIDWQIVGQFKPLIKDLPENEPIFVEKFGDGTYKRQFNSTINNFL
AAKCKETGITQISFHALRHTHASVLLAEGVSIHTISARLGHADVGVTQETYAHVLDELQKKDDQKMLSVLMQIA
>Mature_313_residues
AKKQKEILFCDYFEEWIEVYKVGAIAKITLAKYYNAAKQLRDICPKLFISDFDRREYQRIINVYATTHEKQTVKDFHHHV
KACIKDLFHDGLIDKDPTYRVVIKGAEPTRAKKRKFLQKEELSKLLQSLDTNEIGFGWFVMLVAKTGMRYAEALAITPAD
FDWTAQTISINKTWDYKYNKGFAKTKTLSSVRTIKIDWQIVGQFKPLIKDLPENEPIFVEKFGDGTYKRQFNSTINNFLA
AKCKETGITQISFHALRHTHASVLLAEGVSIHTISARLGHADVGVTQETYAHVLDELQKKDDQKMLSVLMQIA

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 36174; Mature: 36043

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKQKEILFCDYFEEWIEVYKVGAIAKITLAKYYNAAKQLRDICPKLFISDFDRREYQR
CCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
IINVYATTHEKQTVKDFHHHVKACIKDLFHDGLIDKDPTYRVVIKGAEPTRAKKRKFLQK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
EELSKLLQSLDTNEIGFGWFVMLVAKTGMRYAEALAITPADFDWTAQTISINKTWDYKYN
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHEEECCCCCCCCEEEEEEECEECCCCC
KGFAKTKTLSSVRTIKIDWQIVGQFKPLIKDLPENEPIFVEKFGDGTYKRQFNSTINNFL
CCCHHHHHHCCEEEEEEEEEECCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHH
AAKCKETGITQISFHALRHTHASVLLAEGVSIHTISARLGHADVGVTQETYAHVLDELQK
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCCCHHHHHHHHHHHHH
KDDQKMLSVLMQIA
CCHHHHHHHHHHCC
>Mature Secondary Structure 
AKKQKEILFCDYFEEWIEVYKVGAIAKITLAKYYNAAKQLRDICPKLFISDFDRREYQR
CCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
IINVYATTHEKQTVKDFHHHVKACIKDLFHDGLIDKDPTYRVVIKGAEPTRAKKRKFLQK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
EELSKLLQSLDTNEIGFGWFVMLVAKTGMRYAEALAITPADFDWTAQTISINKTWDYKYN
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHEEECCCCCCCCEEEEEEECEECCCCC
KGFAKTKTLSSVRTIKIDWQIVGQFKPLIKDLPENEPIFVEKFGDGTYKRQFNSTINNFL
CCCHHHHHHCCEEEEEEEEEECCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHH
AAKCKETGITQISFHALRHTHASVLLAEGVSIHTISARLGHADVGVTQETYAHVLDELQK
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCCCCHHHHHHHHHHHHH
KDDQKMLSVLMQIA
CCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]