| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872520
Identifier: 116872520
GI number: 116872520
Start: 1120158
End: 1120907
Strand: Direct
Name: 116872520
Synonym: lwe1104
Alternate gene names: NA
Gene position: 1120158-1120907 (Clockwise)
Preceding gene: 116872519
Following gene: 116872521
Centisome position: 39.8
GC content: 40.0
Gene sequence:
>750_bases ATGCCTCAAGTGAGGGATTTATCTGTCGTTGATGTGCCTGGTGGTTGTATTTTGACGAGCTGCGATATTAGCGCTGGTTT CGGTGAGAAAGCGCATGATGGTTTAGTAGTCACCCCAGAAGTGACAGCTCGTTTGACGCTCCGAGTGGCTTTACTAGAAA TGATTGCTTCAGGAGCAGATGTGGTGTCAGTTAGTGATGTTGTTGGAGCCGAGATGGAGCCAACAGGCAGACGTATTATC ATAGGTTTAAAAGAAGAACTTTCTAAAGCGAATCTAAATCATATCGAACTAAATGGTAGTACGGAAGAAAATATGAAGGT AACTCAAACCAGTGTGGGTGTTCTTGTAACTGGTTTTGCGACTAAAGCTGCACTAAAGCTTATAAATGTGCATGAAGCTG CAGTCTTATTTGCATTTGGAGAGCCAATTGTTGGGGAGGAAGTTCTGCAAAAAATGACAGAAATGCCAGATTATCATTTA GTGAAAAAGTTAGTTGCTGATAGTTCTGTCCTTGAAGTAGTACCTGTTGGATCAAAAGGAATATTGTACGAGGCAAATCT GTTAGCAAAGTTAAATAATCGTGTGTTTAAGGAAACGTCTTCACTTGATGAAATAAGTCTAAATAAAACTGCTGGACCAG CATCCGTTATATTGACAGCAGTTAAAAAAAGGGATTGCTCTATATTTGAAAAACATTTTTCAGGAGCCCAATACTTAGGC GAGTTATGCGGAAATGAGGAACAGATATGA
Upstream 100 bases:
>100_bases CGCGAAGCATATTTTTTATATTTCTTCAGTAGATGAAACGGGAATGGAAGAACTTCGAACATATTTAGAAGATTAATTTT AACTAATTGGAGGTTATTTT
Downstream 100 bases:
>100_bases CTGAAATGATGCTTATAACCGGTGGAGCAAGAAGTGGGAAAAGTAATTTTGCGGAAAAAGAAGCTGCGAAATATAGTCGA GTATTATATGTAGCGACAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MPQVRDLSVVDVPGGCILTSCDISAGFGEKAHDGLVVTPEVTARLTLRVALLEMIASGADVVSVSDVVGAEMEPTGRRII IGLKEELSKANLNHIELNGSTEENMKVTQTSVGVLVTGFATKAALKLINVHEAAVLFAFGEPIVGEEVLQKMTEMPDYHL VKKLVADSSVLEVVPVGSKGILYEANLLAKLNNRVFKETSSLDEISLNKTAGPASVILTAVKKRDCSIFEKHFSGAQYLG ELCGNEEQI
Sequences:
>Translated_249_residues MPQVRDLSVVDVPGGCILTSCDISAGFGEKAHDGLVVTPEVTARLTLRVALLEMIASGADVVSVSDVVGAEMEPTGRRII IGLKEELSKANLNHIELNGSTEENMKVTQTSVGVLVTGFATKAALKLINVHEAAVLFAFGEPIVGEEVLQKMTEMPDYHL VKKLVADSSVLEVVPVGSKGILYEANLLAKLNNRVFKETSSLDEISLNKTAGPASVILTAVKKRDCSIFEKHFSGAQYLG ELCGNEEQI >Mature_248_residues PQVRDLSVVDVPGGCILTSCDISAGFGEKAHDGLVVTPEVTARLTLRVALLEMIASGADVVSVSDVVGAEMEPTGRRIII GLKEELSKANLNHIELNGSTEENMKVTQTSVGVLVTGFATKAALKLINVHEAAVLFAFGEPIVGEEVLQKMTEMPDYHLV KKLVADSSVLEVVPVGSKGILYEANLLAKLNNRVFKETSSLDEISLNKTAGPASVILTAVKKRDCSIFEKHFSGAQYLGE LCGNEEQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26590; Mature: 26459
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQVRDLSVVDVPGGCILTSCDISAGFGEKAHDGLVVTPEVTARLTLRVALLEMIASGAD CCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCC VVSVSDVVGAEMEPTGRRIIIGLKEELSKANLNHIELNGSTEENMKVTQTSVGVLVTGFA EEEEHHHHCCCCCCCCCEEEEEEHHHHHHCCCCEEEECCCCCCCCEEEEEECCEEEECHH TKAALKLINVHEAAVLFAFGEPIVGEEVLQKMTEMPDYHLVKKLVADSSVLEVVPVGSKG HHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCC ILYEANLLAKLNNRVFKETSSLDEISLNKTAGPASVILTAVKKRDCSIFEKHFSGAQYLG EEEEHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHCCHHHHHHHCCHHHHHH ELCGNEEQI HHCCCCCCC >Mature Secondary Structure PQVRDLSVVDVPGGCILTSCDISAGFGEKAHDGLVVTPEVTARLTLRVALLEMIASGAD CCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCC VVSVSDVVGAEMEPTGRRIIIGLKEELSKANLNHIELNGSTEENMKVTQTSVGVLVTGFA EEEEHHHHCCCCCCCCCEEEEEEHHHHHHCCCCEEEECCCCCCCCEEEEEECCEEEECHH TKAALKLINVHEAAVLFAFGEPIVGEEVLQKMTEMPDYHLVKKLVADSSVLEVVPVGSKG HHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCC ILYEANLLAKLNNRVFKETSSLDEISLNKTAGPASVILTAVKKRDCSIFEKHFSGAQYLG EEEEHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHCCHHHHHHHCCHHHHHH ELCGNEEQI HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA