| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is pduV [H]
Identifier: 116872519
GI number: 116872519
Start: 1119702
End: 1120133
Strand: Direct
Name: pduV [H]
Synonym: lwe1103
Alternate gene names: 116872519
Gene position: 1119702-1120133 (Clockwise)
Preceding gene: 116872518
Following gene: 116872520
Centisome position: 39.79
GC content: 39.12
Gene sequence:
>432_bases TTGAAAAAAATGATGGTAATGGGCTCAGTCGGTTGTGGTAAAACAACGCTTTGTCAAAAATTGCATGGATATGATATTTC ATATAAAAAAACACAGGCTGTGGAGTACTTTCAAGAAATGATTGATACGCCTGGTGAATTTGTTCAACATAGACAATTAT ATAGTGCACTCACAGTGACGGCAGCTGATGCGTCGGTGATTGCGATTTTACAAAGTGTGACGGAGAAGAAGCAGACGTTT TCACCAATGTTTGCCAGTATTTTTGCTAAACCGGTTATTGGGATTGTGACAAAAGTGGATTTAGCGGAATCGGATAAAGA CATTGAGCGAGCAGAGCGGGAATTACGCATGGCTGGCGCGAAGCATATTTTTTATATTTCTTCAGTAGATGAAACGGGAA TGGAAGAACTTCGAACATATTTAGAAGATTAA
Upstream 100 bases:
>100_bases GGGATGTTTCTTCTGTGGAGTCAGCCTTGCAACAAGTAGTTTATTCATTACATGAAATTTTGGATTTCTCCATTCCAAAA CTTACTAGGAGCTGAGTCGT
Downstream 100 bases:
>100_bases TTTTAACTAATTGGAGGTTATTTTATGCCTCAAGTGAGGGATTTATCTGTCGTTGATGTGCCTGGTGGTTGTATTTTGAC GAGCTGCGATATTAGCGCTG
Product: propanediol utilization protein PduV
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKKMMVMGSVGCGKTTLCQKLHGYDISYKKTQAVEYFQEMIDTPGEFVQHRQLYSALTVTAADASVIAILQSVTEKKQTF SPMFASIFAKPVIGIVTKVDLAESDKDIERAERELRMAGAKHIFYISSVDETGMEELRTYLED
Sequences:
>Translated_143_residues MKKMMVMGSVGCGKTTLCQKLHGYDISYKKTQAVEYFQEMIDTPGEFVQHRQLYSALTVTAADASVIAILQSVTEKKQTF SPMFASIFAKPVIGIVTKVDLAESDKDIERAERELRMAGAKHIFYISSVDETGMEELRTYLED >Mature_143_residues MKKMMVMGSVGCGKTTLCQKLHGYDISYKKTQAVEYFQEMIDTPGEFVQHRQLYSALTVTAADASVIAILQSVTEKKQTF SPMFASIFAKPVIGIVTKVDLAESDKDIERAERELRMAGAKHIFYISSVDETGMEELRTYLED
Specific function: Ethanolamine utilization. [C]
COG id: COG4917
COG function: function code E; Ethanolamine utilization protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eutP/pduV family [H]
Homologues:
Organism=Escherichia coli, GI1788803, Length=144, Percent_Identity=31.9444444444444, Blast_Score=70, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012381 [H]
Pfam domain/function: PF10662 PduV-EutP [H]
EC number: NA
Molecular weight: Translated: 16058; Mature: 16058
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMMVMGSVGCGKTTLCQKLHGYDISYKKTQAVEYFQEMIDTPGEFVQHRQLYSALTVT CCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH AADASVIAILQSVTEKKQTFSPMFASIFAKPVIGIVTKVDLAESDKDIERAERELRMAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC KHIFYISSVDETGMEELRTYLED CCEEEEECCCCCCHHHHHHHHCC >Mature Secondary Structure MKKMMVMGSVGCGKTTLCQKLHGYDISYKKTQAVEYFQEMIDTPGEFVQHRQLYSALTVT CCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH AADASVIAILQSVTEKKQTFSPMFASIFAKPVIGIVTKVDLAESDKDIERAERELRMAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC KHIFYISSVDETGMEELRTYLED CCEEEEECCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10498708; 11677609 [H]