BacMap

Definition	Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession	NC_008555
Length	2,814,130

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The map label for this gene is tagH [H]

Identifier: 116872471

GI number: 116872471

Start: 1070174

End: 1071184

Strand: Direct

Name: tagH [H]

Synonym: lwe1053

Alternate gene names: 116872471

Gene position: 1070174-1071184 (Clockwise)

Preceding gene: 116872470

Following gene: 116872472

Centisome position: 38.03

GC content: 32.54

Gene sequence:

>1011_bases
ATGGATAAAAATATTAAAGTATCATTTAAACATGTGTCAAAAGAATATGACCTCTATCAAAATAAATCAGATAAGATTAA
AGGCTTATTCATGCCAAAAAGCCAAAAAATGCAATCTTTTTGGGCTTTAAGAGATGTCTCTTTTGATGTTCATGATGGTG
AAACTGTTGGACTTATTGGTATTAATGGTTCCGGGAAATCTACCATTTCTAGCATTATGTCTGGCGTAATCCCTCCAACT
CAGGGTGAAGTTATTATTAACGGGGAGACCTCATTAATTGCTATTGCTGTTGGTTTAAAAGGTCCACTTACTGGCTATGA
AAATATTCGATTGAAGTTACTTATGCATGGTATGAAGAGTTCTCAAATTAACAAGTTAATGCCAAGTATTATTGAATTTG
CTGATATTGGCGATTTTATTAATCAACCTATTAAAAACTATTCTAGTGGTATGCGTTCTCGTCTTGGATTTGCGATTTCT
GTGCATACTAATCCAGATATTTTAGTCATTGATGAAGCTTTGTCAGTCGGTGATCAAACTTTCTATCAAAAATGTGTAAA
TAAAATCAATGAATTTAAAGCGCGGGGTAAAACAATAGTGTTTGTCAGCCACTCGCTTGGTCAAATGAAAAGTTTATGTG
ATAGAATTATTTGGATGCATCATGGTGAAATACGCGAAATGGGGGAAGCTAAGGAAGTTGCCCAAAAATATGATGAGTTT
GTAAAATGGTTCAATCAACAGCCAAATGACTATAAGAAAAAATACCAAAAAGAACATAAAGAAAACCAAAAAGCACCTCA
GAAAAAGGTTTACCCTAATCCTAATGCTAATAAATACCGTTTAACACTTTTTGATAAGTGCTTTTTGACAGTATTAATTG
TATTAACGATTTTATTCGGAACATTAGTGGGAACAGGTAAATCATTTAAAGGATTGATTAGCGAGGGTTCTGACACCCAT
ATAGAAAAAATCGTTCAATTAGATACTAATCAATTAAAAACAAAATCATAA

Upstream 100 bases:

>100_bases
GTACTTTTGGTTAATAACAATTGTATTGCTTTTTGTTGGAGCGACACTACACATGAAATTCCGCGAACGTTTCGTGGATT
ATTTATAGGAGGTTAGACAG

Downstream 100 bases:

>100_bases
AAAAAAGCTTCTTACTATTTATTAGTAAGAAGCTTTTTCTTAATTAGTTGATTTTCTTTTCTCACGTTCAGTAATGTAAA
TCATTTCTCGGAAGAAATCT

Product: techoic acid ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MDKNIKVSFKHVSKEYDLYQNKSDKIKGLFMPKSQKMQSFWALRDVSFDVHDGETVGLIGINGSGKSTISSIMSGVIPPT
QGEVIINGETSLIAIAVGLKGPLTGYENIRLKLLMHGMKSSQINKLMPSIIEFADIGDFINQPIKNYSSGMRSRLGFAIS
VHTNPDILVIDEALSVGDQTFYQKCVNKINEFKARGKTIVFVSHSLGQMKSLCDRIIWMHHGEIREMGEAKEVAQKYDEF
VKWFNQQPNDYKKKYQKEHKENQKAPQKKVYPNPNANKYRLTLFDKCFLTVLIVLTILFGTLVGTGKSFKGLISEGSDTH
IEKIVQLDTNQLKTKS

Sequences:

>Translated_336_residues
MDKNIKVSFKHVSKEYDLYQNKSDKIKGLFMPKSQKMQSFWALRDVSFDVHDGETVGLIGINGSGKSTISSIMSGVIPPT
QGEVIINGETSLIAIAVGLKGPLTGYENIRLKLLMHGMKSSQINKLMPSIIEFADIGDFINQPIKNYSSGMRSRLGFAIS
VHTNPDILVIDEALSVGDQTFYQKCVNKINEFKARGKTIVFVSHSLGQMKSLCDRIIWMHHGEIREMGEAKEVAQKYDEF
VKWFNQQPNDYKKKYQKEHKENQKAPQKKVYPNPNANKYRLTLFDKCFLTVLIVLTILFGTLVGTGKSFKGLISEGSDTH
IEKIVQLDTNQLKTKS
>Mature_336_residues
MDKNIKVSFKHVSKEYDLYQNKSDKIKGLFMPKSQKMQSFWALRDVSFDVHDGETVGLIGINGSGKSTISSIMSGVIPPT
QGEVIINGETSLIAIAVGLKGPLTGYENIRLKLLMHGMKSSQINKLMPSIIEFADIGDFINQPIKNYSSGMRSRLGFAIS
VHTNPDILVIDEALSVGDQTFYQKCVNKINEFKARGKTIVFVSHSLGQMKSLCDRIIWMHHGEIREMGEAKEVAQKYDEF
VKWFNQQPNDYKKKYQKEHKENQKAPQKKVYPNPNANKYRLTLFDKCFLTVLIVLTILFGTLVGTGKSFKGLISEGSDTH
IEKIVQLDTNQLKTKS

Specific function: Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system [H]

COG id: COG1134

COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27262624, Length=248, Percent_Identity=30.241935483871, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI27262626, Length=248, Percent_Identity=30.241935483871, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI6005701, Length=229, Percent_Identity=25.764192139738, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI27436953, Length=227, Percent_Identity=26.431718061674, Blast_Score=93, Evalue=4e-19,
Organism=Homo sapiens, GI27477115, Length=229, Percent_Identity=25.3275109170306, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI153792144, Length=242, Percent_Identity=27.2727272727273, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI31657092, Length=221, Percent_Identity=25.3393665158371, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI45446740, Length=219, Percent_Identity=24.6575342465753, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI47078218, Length=219, Percent_Identity=24.6575342465753, Blast_Score=85, Evalue=7e-17,
Organism=Homo sapiens, GI89111135, Length=249, Percent_Identity=26.5060240963855, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI105990541, Length=231, Percent_Identity=25.1082251082251, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI116734710, Length=208, Percent_Identity=25.9615384615385, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI30795238, Length=210, Percent_Identity=23.8095238095238, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI150417984, Length=219, Percent_Identity=22.3744292237443, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI27881501, Length=210, Percent_Identity=23.8095238095238, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI21536376, Length=213, Percent_Identity=23.0046948356808, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI21729873, Length=233, Percent_Identity=27.0386266094421, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI15149474, Length=233, Percent_Identity=27.0386266094421, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI21729876, Length=233, Percent_Identity=27.0386266094421, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI66529005, Length=240, Percent_Identity=25, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1789032, Length=233, Percent_Identity=25.3218884120172, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1786398, Length=249, Percent_Identity=24.8995983935743, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787758, Length=203, Percent_Identity=25.615763546798, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1790467, Length=219, Percent_Identity=25.5707762557078, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI48994943, Length=234, Percent_Identity=25.6410256410256, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI87081782, Length=244, Percent_Identity=27.0491803278689, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1787370, Length=203, Percent_Identity=22.6600985221675, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87081791, Length=204, Percent_Identity=23.5294117647059, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1788210, Length=194, Percent_Identity=29.8969072164948, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1790190, Length=207, Percent_Identity=27.0531400966184, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789672, Length=209, Percent_Identity=24.4019138755981, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787759, Length=222, Percent_Identity=25.6756756756757, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI48994883, Length=247, Percent_Identity=25.5060728744939, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87081834, Length=201, Percent_Identity=25.8706467661692, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787029, Length=221, Percent_Identity=22.6244343891403, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1789751, Length=251, Percent_Identity=24.7011952191235, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1788165, Length=229, Percent_Identity=24.4541484716157, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1789891, Length=213, Percent_Identity=23.943661971831, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI87082267, Length=219, Percent_Identity=23.2876712328767, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI48994997, Length=212, Percent_Identity=26.4150943396226, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788761, Length=207, Percent_Identity=22.7053140096618, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1790162, Length=236, Percent_Identity=24.1525423728814, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI48995001, Length=215, Percent_Identity=23.2558139534884, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786319, Length=197, Percent_Identity=24.3654822335025, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1787712, Length=216, Percent_Identity=22.2222222222222, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=211, Percent_Identity=25.5924170616114, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI115533608, Length=216, Percent_Identity=26.8518518518519, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17510237, Length=206, Percent_Identity=24.2718446601942, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI193209708, Length=228, Percent_Identity=28.5087719298246, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17565938, Length=213, Percent_Identity=25.3521126760563, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71983516, Length=226, Percent_Identity=23.8938053097345, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71983510, Length=226, Percent_Identity=23.8938053097345, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71983523, Length=226, Percent_Identity=23.8938053097345, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=263, Percent_Identity=28.8973384030418, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=248, Percent_Identity=25.4032258064516, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71984940, Length=250, Percent_Identity=25.6, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI193202349, Length=217, Percent_Identity=27.1889400921659, Blast_Score=71, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI71992290, Length=266, Percent_Identity=25.5639097744361, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115535101, Length=245, Percent_Identity=24.4897959183673, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193208177, Length=220, Percent_Identity=26.3636363636364, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17543740, Length=215, Percent_Identity=24.6511627906977, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17567265, Length=244, Percent_Identity=24.5901639344262, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17567269, Length=225, Percent_Identity=25.3333333333333, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI221512771, Length=216, Percent_Identity=28.7037037037037, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24643674, Length=212, Percent_Identity=27.8301886792453, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI28573571, Length=223, Percent_Identity=25.5605381165919, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28573573, Length=223, Percent_Identity=25.5605381165919, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24666092, Length=209, Percent_Identity=25.8373205741627, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI221500365, Length=185, Percent_Identity=25.4054054054054, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI116007184, Length=185, Percent_Identity=25.4054054054054, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24648314, Length=197, Percent_Identity=23.8578680203046, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI281363262, Length=217, Percent_Identity=26.7281105990783, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24653245, Length=217, Percent_Identity=26.7281105990783, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI85726357, Length=228, Percent_Identity=25.8771929824561, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015860
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.40 [H]

Molecular weight: Translated: 37888; Mature: 37888

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKNIKVSFKHVSKEYDLYQNKSDKIKGLFMPKSQKMQSFWALRDVSFDVHDGETVGLIG
CCCCEEEEHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCEEEECCCCEEEEEE
INGSGKSTISSIMSGVIPPTQGEVIINGETSLIAIAVGLKGPLTGYENIRLKLLMHGMKS
ECCCCHHHHHHHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCH
SQINKLMPSIIEFADIGDFINQPIKNYSSGMRSRLGFAISVHTNPDILVIDEALSVGDQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECHHHCCHHH
FYQKCVNKINEFKARGKTIVFVSHSLGQMKSLCDRIIWMHHGEIREMGEAKEVAQKYDEF
HHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VKWFNQQPNDYKKKYQKEHKENQKAPQKKVYPNPNANKYRLTLFDKCFLTVLIVLTILFG
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
TLVGTGKSFKGLISEGSDTHIEKIVQLDTNQLKTKS
HHHCCCCHHHHHHCCCCHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MDKNIKVSFKHVSKEYDLYQNKSDKIKGLFMPKSQKMQSFWALRDVSFDVHDGETVGLIG
CCCCEEEEHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCEEEECCCCEEEEEE
INGSGKSTISSIMSGVIPPTQGEVIINGETSLIAIAVGLKGPLTGYENIRLKLLMHGMKS
ECCCCHHHHHHHHHCCCCCCCCCEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCH
SQINKLMPSIIEFADIGDFINQPIKNYSSGMRSRLGFAISVHTNPDILVIDEALSVGDQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEECHHHCCHHH
FYQKCVNKINEFKARGKTIVFVSHSLGQMKSLCDRIIWMHHGEIREMGEAKEVAQKYDEF
HHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VKWFNQQPNDYKKKYQKEHKENQKAPQKKVYPNPNANKYRLTLFDKCFLTVLIVLTILFG
HHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
TLVGTGKSFKGLISEGSDTHIEKIVQLDTNQLKTKS
HHHCCCCHHHHHHCCCCHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]