| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is suhB [H]
Identifier: 116872462
GI number: 116872462
Start: 1058312
End: 1059085
Strand: Direct
Name: suhB [H]
Synonym: lwe1044
Alternate gene names: 116872462
Gene position: 1058312-1059085 (Clockwise)
Preceding gene: 116872459
Following gene: 116872463
Centisome position: 37.61
GC content: 38.24
Gene sequence:
>774_bases ATGGATATCGAAAAAATAGATTATTTAGCAAGGTTATGGATTATGGAAGCAGCAACAAAAATCAAACAGTCTTTTAAAGA AACTTTAGATATTGATACAAAGAGTGGGCGAAATGATTTAGTAACAAACATGGATAAAGAAACCGAAGCTTTTTTTGTCA AACAAATTAAAGAACATTTCAAAGAACACCGCTTGTTTGGAGAAGAGGGCATGTCAGATGAGGTGACAGATTTAAATGGT GTCGTTTGGATTCTTGATCCAATAGACGGTACACTTAATTTTGTCGAACAGCAACGAGATTTTTCTATCTCCCTAGCGAT TTATCAAGATGGTATAGGATACTTAGCTTACATTTATGATGTGGAGCGTGATGAACTTTACTTTGCAGAAAAAGGGAAGG GTGCAACTGTCAATGGCAAATCAATTCCCAAAATGAATAAAACCATGGATCTGCAAGACGCTTTGTTGATCGCTAACCTG AGTGTTACGAAGAAATTCCCGACTGTTTGGGAAGCAGTAAAAGTTTCAAGAGGACTACGACTTCACGGAGCAGCATCACT AGAATATATGGATGTTGCAACAGGACGAGCGGGAGCCTATCTTTCTGCCAATTTAGCACCGTGGGATATCGCAGCAGGAA AGATTATCGTCGAAGAATTAGGTGGAATTGTAACCAGAATTGATGGATCGGAAATCAATATGTTAGAAAAAGGAAGTTCT ATTGTAGCGGCCCCTAAAATCCATCAAACCTTAATAGACAACTACCTGCCTTAA
Upstream 100 bases:
>100_bases TATTATACGGAAGTTAAGTTCTAAGTGAAAGAATCTTGTTCTATTCAGATAATTCATTTTTGTGATAAAATAAACAAAAC GAGTCTAATGAGGTGTATAT
Downstream 100 bases:
>100_bases AGAAAGCGCACAACATAAAAAAACTCTTTTTCAGAAAATAAAAATCGTGCTAAATCCGCTTAGCTATGCTATAATAGGTA AGTTGATTTAAACGAGACGA
Product: inositol monophosphatase family protein
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MDIEKIDYLARLWIMEAATKIKQSFKETLDIDTKSGRNDLVTNMDKETEAFFVKQIKEHFKEHRLFGEEGMSDEVTDLNG VVWILDPIDGTLNFVEQQRDFSISLAIYQDGIGYLAYIYDVERDELYFAEKGKGATVNGKSIPKMNKTMDLQDALLIANL SVTKKFPTVWEAVKVSRGLRLHGAASLEYMDVATGRAGAYLSANLAPWDIAAGKIIVEELGGIVTRIDGSEINMLEKGSS IVAAPKIHQTLIDNYLP
Sequences:
>Translated_257_residues MDIEKIDYLARLWIMEAATKIKQSFKETLDIDTKSGRNDLVTNMDKETEAFFVKQIKEHFKEHRLFGEEGMSDEVTDLNG VVWILDPIDGTLNFVEQQRDFSISLAIYQDGIGYLAYIYDVERDELYFAEKGKGATVNGKSIPKMNKTMDLQDALLIANL SVTKKFPTVWEAVKVSRGLRLHGAASLEYMDVATGRAGAYLSANLAPWDIAAGKIIVEELGGIVTRIDGSEINMLEKGSS IVAAPKIHQTLIDNYLP >Mature_257_residues MDIEKIDYLARLWIMEAATKIKQSFKETLDIDTKSGRNDLVTNMDKETEAFFVKQIKEHFKEHRLFGEEGMSDEVTDLNG VVWILDPIDGTLNFVEQQRDFSISLAIYQDGIGYLAYIYDVERDELYFAEKGKGATVNGKSIPKMNKTMDLQDALLIANL SVTKKFPTVWEAVKVSRGLRLHGAASLEYMDVATGRAGAYLSANLAPWDIAAGKIIVEELGGIVTRIDGSEINMLEKGSS IVAAPKIHQTLIDNYLP
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=240, Percent_Identity=28.75, Blast_Score=112, Evalue=3e-25, Organism=Homo sapiens, GI221625487, Length=244, Percent_Identity=28.6885245901639, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI5031789, Length=244, Percent_Identity=28.6885245901639, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI221625507, Length=161, Percent_Identity=29.8136645962733, Blast_Score=77, Evalue=1e-14, Organism=Escherichia coli, GI1788882, Length=228, Percent_Identity=32.4561403508772, Blast_Score=130, Evalue=1e-31, Organism=Caenorhabditis elegans, GI193202572, Length=246, Percent_Identity=32.9268292682927, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI193202570, Length=249, Percent_Identity=32.5301204819277, Blast_Score=114, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6320493, Length=218, Percent_Identity=29.3577981651376, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6321836, Length=231, Percent_Identity=27.7056277056277, Blast_Score=72, Evalue=6e-14, Organism=Drosophila melanogaster, GI21357329, Length=265, Percent_Identity=31.3207547169811, Blast_Score=124, Evalue=8e-29, Organism=Drosophila melanogaster, GI24664926, Length=238, Percent_Identity=30.672268907563, Blast_Score=118, Evalue=4e-27, Organism=Drosophila melanogaster, GI24664922, Length=225, Percent_Identity=32, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI21357303, Length=223, Percent_Identity=31.390134529148, Blast_Score=103, Evalue=9e-23, Organism=Drosophila melanogaster, GI24664918, Length=211, Percent_Identity=30.3317535545024, Blast_Score=97, Evalue=9e-21, Organism=Drosophila melanogaster, GI21357957, Length=220, Percent_Identity=28.1818181818182, Blast_Score=94, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 28728; Mature: 28728
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIEKIDYLARLWIMEAATKIKQSFKETLDIDTKSGRNDLVTNMDKETEAFFVKQIKEHF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHH KEHRLFGEEGMSDEVTDLNGVVWILDPIDGTLNFVEQQRDFSISLAIYQDGIGYLAYIYD HHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEECCCCEEEEEEE VERDELYFAEKGKGATVNGKSIPKMNKTMDLQDALLIANLSVTKKFPTVWEAVKVSRGLR CCCCEEEEEECCCCCEECCCCCCCCCCCCCHHHHHEEECCHHHCCCHHHHHHHHHHCCEE LHGAASLEYMDVATGRAGAYLSANLAPWDIAAGKIIVEELGGIVTRIDGSEINMLEKGSS EECCCCEEEEEECCCCCCCEEECCCCCCHHCCCHHHHHHHCCEEEEECCCCCCHHHCCCC IVAAPKIHQTLIDNYLP EEECCHHHHHHHHHCCC >Mature Secondary Structure MDIEKIDYLARLWIMEAATKIKQSFKETLDIDTKSGRNDLVTNMDKETEAFFVKQIKEHF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHH KEHRLFGEEGMSDEVTDLNGVVWILDPIDGTLNFVEQQRDFSISLAIYQDGIGYLAYIYD HHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEEECCCCEEEEEEE VERDELYFAEKGKGATVNGKSIPKMNKTMDLQDALLIANLSVTKKFPTVWEAVKVSRGLR CCCCEEEEEECCCCCEECCCCCCCCCCCCCHHHHHEEECCHHHCCCHHHHHHHHHHCCEE LHGAASLEYMDVATGRAGAYLSANLAPWDIAAGKIIVEELGGIVTRIDGSEINMLEKGSS EECCCCEEEEEECCCCCCCEEECCCCCCHHCCCHHHHHHHCCEEEEECCCCCCHHHCCCC IVAAPKIHQTLIDNYLP EEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969500; 9384377 [H]