| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872193
Identifier: 116872193
GI number: 116872193
Start: 801494
End: 803722
Strand: Direct
Name: 116872193
Synonym: lwe0773
Alternate gene names: NA
Gene position: 801494-803722 (Clockwise)
Preceding gene: 116872192
Following gene: 116872194
Centisome position: 28.48
GC content: 32.97
Gene sequence:
>2229_bases ATGAATGATATTTTGAGTTTAAAAGGTAGTTTTGTACAAAAATCAAATGATAGTAGACCTGGTTCACCAAAATTACCAGC AGGTTCAAGTGTGTCAATATTTGACATTGATAGTTTAATTAGTTATTTGCTTGAAATGGATAGATTTTGGGATGCACAGA ATATTCTAAATGGTGGTCTCATTAGTGTTTATTATACTAGAATTATTGCAAAGAGTAACAGAATAAAAGGCTTTTTAGCA GTAGGAAGTCAGTTACCAAACTCAACAATAGTTGGTGCTAAATTTTCAGATGATAAAACAAAACATATCATTACTCATTA TATTCCCCTCTCTGCTATTAAAGAATCGATTTTGGCAGCTAGAGAAGCAATTAGAATTTTAAAAAATGAATTCTCTGGTA GTGTCAATGATGAAATATTTAATGATCCTAAAATATTTCGGAAAATAGATTTTGAAAAGTATACAATTACAAAAACTAAG TTTCAACGGTTGATTGTAGATACAGCCTATATCGAAAAATTTGACGTTGAGCGTGCGGATTTTGATACAGATAAAAGTTC AATTGTTACTCTATATGAGACTGGAATTGATACGAAAGAATTGTTGAAAAAAATAGGTATCCCTATATTCAATGAGCGGA TATTAAATAGAACAACAATTTTACTTGATGAACAGTATTTACAAGTTTTATTACAGAGAGCGCCATTTTTAGTAGCGATG GCAGTAGAAAATATTACAGAATTAGCACCAAGTGATTTTATAGAAACTTTTTCAAGTGAAGCTACCTTAATATCATCACC CAAAAGCGAACCAACCATTGGAGTCATTGATACACTTTTTGATGAAAGGGTTTATTTCCATGAGTGGGTTGAGTTCCATA ACATGATTGATGAAAATATTCCAATAGAACCTTCGGATTATAGACATGGAACATCCGTTTCATCAATTATTGTGGATGGG CACTCTTTAAACCCAGAATTGGATGATGGATGTGGTCGCTTTAAGGTTAGACATTTTGGAGTTGCTACAAATCGGGCGTT CAATTCCTTTTCAATTATTCGTACTATTAATGATATTGTTAAAAGTAACCGTGATATTCGTGTATGGAATTTATCCTTAG GTTCAAATGAAGAAGTGAGAGAAAATTTTATATCTGCGGAAGGAGCAATTCTTGATCGAATTCAATTTGAAAATGATGTT ATCTTTGTTATTGCTGGAACAAATAAAAAAGCATTAGATAAAGAAAAACGCATTGGTGCACCTGCAGATTCAATCAATTC AGTTGTCGTAAATTCTGTAGACCATCAAAAAAATTCAGCCTCCTTTTCTAGAAAAGGAATTGTTCTATCATTTTTTACCA AACCGGATGTTAGTTACTACGGGGGAGGTAATGGCGAATTTCTGAATGTTTGTGAACCATTGGGGCAAGCAAGAGTCTGT GGCACATCATACGCAGCACCATGGATTGCGAGAAAACTGTCCTATCTAATTGATATTATTGGACTTAGTAAAGAGGTTGC CAAAGCTTTATTGATTGACTCTTCAATTGGTTGGAATAGTAAACCAGATTTTAATCAACTAGCTACTTTAGGACATGGAG TTGTGCCAATTAAGATTTTGGATATTCTTCAATCTCCCTCTGATGAGATACGGTTTATTGTAGAAGGAGTTTCTGAAAAG TATGATACTTATAACTATAGCTTCCCAGTTCCTGTCCATAAAAATAAACATCCCTTTGTTTCAAAAGCAACACTATGCTA TTTTCCTAAATGCGCTAGAAATCAAGGTGTAGATTATACAAATACAGAATTGGATATATACTTTGGCAGACTTGATAATA GTGGTAAGTTGAAATCAATAAATAAAAATAAACAAAGTGTCACAGACGAAGAGCACTATCTTAAAGAAGTAAGTGCTCGG AAAATGTTTCGAAAATGGGATAATGTTAAACATATCAGTGAGCCCATCACTGCACGAACACAAGCAAAAAAAGTTTATGA TAACCCGTTATGGGGAATGAGTATCAAAACAAAAGAGCGCTTAGATACAAATGATGGTGTGGGTATAAGATTTGGAGTCG TAGTTACGTTAAAAGAAATTAATGGAATTAATCGAATTGACGACTTTATTCAACAATGTAACTTAAAAGGTTGGCTAGTA AACCGTGTTAATATTGAGAATAGAATCGATATCTATCAAACTGCTGATGAAGAAATTACATTTGAATAG
Upstream 100 bases:
>100_bases AATGAATTAAAAAAAATGGGCTTTACAGTGAGAGAAATCGAGCTACTGACGGGCGTTTCTAAAAGTCAAGTTGCGAGAGA GCTGAGGGGAGAATAGACAG
Downstream 100 bases:
>100_bases TATAAGGAAGTTCTGCTGAAAAGTAGAGCTTCTTTTTTTTGAAATTTGAGTGGTTTCGAATGAACAATACTTTAAATAAA ATATGTAGTATATAAGGAGG
Product: AAA - ATPase, putative
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 742; Mature: 742
Protein sequence:
>742_residues MNDILSLKGSFVQKSNDSRPGSPKLPAGSSVSIFDIDSLISYLLEMDRFWDAQNILNGGLISVYYTRIIAKSNRIKGFLA VGSQLPNSTIVGAKFSDDKTKHIITHYIPLSAIKESILAAREAIRILKNEFSGSVNDEIFNDPKIFRKIDFEKYTITKTK FQRLIVDTAYIEKFDVERADFDTDKSSIVTLYETGIDTKELLKKIGIPIFNERILNRTTILLDEQYLQVLLQRAPFLVAM AVENITELAPSDFIETFSSEATLISSPKSEPTIGVIDTLFDERVYFHEWVEFHNMIDENIPIEPSDYRHGTSVSSIIVDG HSLNPELDDGCGRFKVRHFGVATNRAFNSFSIIRTINDIVKSNRDIRVWNLSLGSNEEVRENFISAEGAILDRIQFENDV IFVIAGTNKKALDKEKRIGAPADSINSVVVNSVDHQKNSASFSRKGIVLSFFTKPDVSYYGGGNGEFLNVCEPLGQARVC GTSYAAPWIARKLSYLIDIIGLSKEVAKALLIDSSIGWNSKPDFNQLATLGHGVVPIKILDILQSPSDEIRFIVEGVSEK YDTYNYSFPVPVHKNKHPFVSKATLCYFPKCARNQGVDYTNTELDIYFGRLDNSGKLKSINKNKQSVTDEEHYLKEVSAR KMFRKWDNVKHISEPITARTQAKKVYDNPLWGMSIKTKERLDTNDGVGIRFGVVVTLKEINGINRIDDFIQQCNLKGWLV NRVNIENRIDIYQTADEEITFE
Sequences:
>Translated_742_residues MNDILSLKGSFVQKSNDSRPGSPKLPAGSSVSIFDIDSLISYLLEMDRFWDAQNILNGGLISVYYTRIIAKSNRIKGFLA VGSQLPNSTIVGAKFSDDKTKHIITHYIPLSAIKESILAAREAIRILKNEFSGSVNDEIFNDPKIFRKIDFEKYTITKTK FQRLIVDTAYIEKFDVERADFDTDKSSIVTLYETGIDTKELLKKIGIPIFNERILNRTTILLDEQYLQVLLQRAPFLVAM AVENITELAPSDFIETFSSEATLISSPKSEPTIGVIDTLFDERVYFHEWVEFHNMIDENIPIEPSDYRHGTSVSSIIVDG HSLNPELDDGCGRFKVRHFGVATNRAFNSFSIIRTINDIVKSNRDIRVWNLSLGSNEEVRENFISAEGAILDRIQFENDV IFVIAGTNKKALDKEKRIGAPADSINSVVVNSVDHQKNSASFSRKGIVLSFFTKPDVSYYGGGNGEFLNVCEPLGQARVC GTSYAAPWIARKLSYLIDIIGLSKEVAKALLIDSSIGWNSKPDFNQLATLGHGVVPIKILDILQSPSDEIRFIVEGVSEK YDTYNYSFPVPVHKNKHPFVSKATLCYFPKCARNQGVDYTNTELDIYFGRLDNSGKLKSINKNKQSVTDEEHYLKEVSAR KMFRKWDNVKHISEPITARTQAKKVYDNPLWGMSIKTKERLDTNDGVGIRFGVVVTLKEINGINRIDDFIQQCNLKGWLV NRVNIENRIDIYQTADEEITFE >Mature_742_residues MNDILSLKGSFVQKSNDSRPGSPKLPAGSSVSIFDIDSLISYLLEMDRFWDAQNILNGGLISVYYTRIIAKSNRIKGFLA VGSQLPNSTIVGAKFSDDKTKHIITHYIPLSAIKESILAAREAIRILKNEFSGSVNDEIFNDPKIFRKIDFEKYTITKTK FQRLIVDTAYIEKFDVERADFDTDKSSIVTLYETGIDTKELLKKIGIPIFNERILNRTTILLDEQYLQVLLQRAPFLVAM AVENITELAPSDFIETFSSEATLISSPKSEPTIGVIDTLFDERVYFHEWVEFHNMIDENIPIEPSDYRHGTSVSSIIVDG HSLNPELDDGCGRFKVRHFGVATNRAFNSFSIIRTINDIVKSNRDIRVWNLSLGSNEEVRENFISAEGAILDRIQFENDV IFVIAGTNKKALDKEKRIGAPADSINSVVVNSVDHQKNSASFSRKGIVLSFFTKPDVSYYGGGNGEFLNVCEPLGQARVC GTSYAAPWIARKLSYLIDIIGLSKEVAKALLIDSSIGWNSKPDFNQLATLGHGVVPIKILDILQSPSDEIRFIVEGVSEK YDTYNYSFPVPVHKNKHPFVSKATLCYFPKCARNQGVDYTNTELDIYFGRLDNSGKLKSINKNKQSVTDEEHYLKEVSAR KMFRKWDNVKHISEPITARTQAKKVYDNPLWGMSIKTKERLDTNDGVGIRFGVVVTLKEINGINRIDDFIQQCNLKGWLV NRVNIENRIDIYQTADEEITFE
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83784; Mature: 83784
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDILSLKGSFVQKSNDSRPGSPKLPAGSSVSIFDIDSLISYLLEMDRFWDAQNILNGGL CCCCHHCCCCHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHCCCH ISVYYTRIIAKSNRIKGFLAVGSQLPNSTIVGAKFSDDKTKHIITHYIPLSAIKESILAA HHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHH REAIRILKNEFSGSVNDEIFNDPKIFRKIDFEKYTITKTKFQRLIVDTAYIEKFDVERAD HHHHHHHHHHHCCCCCCHHCCCCHHHHEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCC FDTDKSSIVTLYETGIDTKELLKKIGIPIFNERILNRTTILLDEQYLQVLLQRAPFLVAM CCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHCCEEEEECHHHHHHHHHHCCCEEHH AVENITELAPSDFIETFSSEATLISSPKSEPTIGVIDTLFDERVYFHEWVEFHNMIDENI HHHHHHHHCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PIEPSDYRHGTSVSSIIVDGHSLNPELDDGCGRFKVRHFGVATNRAFNSFSIIRTINDIV CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCHHCCCCCHHHHHHHHHHHH KSNRDIRVWNLSLGSNEEVRENFISAEGAILDRIQFENDVIFVIAGTNKKALDKEKRIGA HCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHEEECCCEEEEEECCCCHHHCHHHHCCC PADSINSVVVNSVDHQKNSASFSRKGIVLSFFTKPDVSYYGGGNGEFLNVCEPLGQARVC CHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCHHHHHHHCCCCEEC GTSYAAPWIARKLSYLIDIIGLSKEVAKALLIDSSIGWNSKPDFNQLATLGHGVVPIKIL CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHH DILQSPSDEIRFIVEGVSEKYDTYNYSFPVPVHKNKHPFVSKATLCYFPKCARNQGVDYT HHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCCCCC NTELDIYFGRLDNSGKLKSINKNKQSVTDEEHYLKEVSARKMFRKWDNVKHISEPITART CCEEEEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHH QAKKVYDNPLWGMSIKTKERLDTNDGVGIRFGVVVTLKEINGINRIDDFIQQCNLKGWLV HHHHHHCCCCCCCEECHHHHCCCCCCCEEEEEEEEEEEHHCCCHHHHHHHHHCCCCEEEE NRVNIENRIDIYQTADEEITFE EEECCCCCEEEEECCCCCEECC >Mature Secondary Structure MNDILSLKGSFVQKSNDSRPGSPKLPAGSSVSIFDIDSLISYLLEMDRFWDAQNILNGGL CCCCHHCCCCHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHCCCH ISVYYTRIIAKSNRIKGFLAVGSQLPNSTIVGAKFSDDKTKHIITHYIPLSAIKESILAA HHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHH REAIRILKNEFSGSVNDEIFNDPKIFRKIDFEKYTITKTKFQRLIVDTAYIEKFDVERAD HHHHHHHHHHHCCCCCCHHCCCCHHHHEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCC FDTDKSSIVTLYETGIDTKELLKKIGIPIFNERILNRTTILLDEQYLQVLLQRAPFLVAM CCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHCCEEEEECHHHHHHHHHHCCCEEHH AVENITELAPSDFIETFSSEATLISSPKSEPTIGVIDTLFDERVYFHEWVEFHNMIDENI HHHHHHHHCHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC PIEPSDYRHGTSVSSIIVDGHSLNPELDDGCGRFKVRHFGVATNRAFNSFSIIRTINDIV CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCHHCCCCCHHHHHHHHHHHH KSNRDIRVWNLSLGSNEEVRENFISAEGAILDRIQFENDVIFVIAGTNKKALDKEKRIGA HCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHEEECCCEEEEEECCCCHHHCHHHHCCC PADSINSVVVNSVDHQKNSASFSRKGIVLSFFTKPDVSYYGGGNGEFLNVCEPLGQARVC CHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCHHHHHHHCCCCEEC GTSYAAPWIARKLSYLIDIIGLSKEVAKALLIDSSIGWNSKPDFNQLATLGHGVVPIKIL CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHH DILQSPSDEIRFIVEGVSEKYDTYNYSFPVPVHKNKHPFVSKATLCYFPKCARNQGVDYT HHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCCCCCC NTELDIYFGRLDNSGKLKSINKNKQSVTDEEHYLKEVSARKMFRKWDNVKHISEPITART CCEEEEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHH QAKKVYDNPLWGMSIKTKERLDTNDGVGIRFGVVVTLKEINGINRIDDFIQQCNLKGWLV HHHHHHCCCCCCCEECHHHHCCCCCCCEEEEEEEEEEEHHCCCHHHHHHHHHCCCCEEEE NRVNIENRIDIYQTADEEITFE EEECCCCCEEEEECCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA