| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is inlJ [H]
Identifier: 116872122
GI number: 116872122
Start: 728152
End: 730056
Strand: Direct
Name: inlJ [H]
Synonym: lwe0702
Alternate gene names: 116872122
Gene position: 728152-730056 (Clockwise)
Preceding gene: 116872121
Following gene: 116872124
Centisome position: 25.87
GC content: 33.86
Gene sequence:
>1905_bases ATGAAAAAAGCTTTTAAATGTCTATCAATAGTAGCTATAAGTTTAAGTGTTATTGGTGGAAGCCCGCTTACAAGTTTAGC ATTTGAAAATGACAAGCAGACATCAAATGAAGAGCAATCACAACTGAGGGCAGAAAAAGCAAGTACAGACATAGTTTCAT CTCAAGATTTAGGAAATCAAGCATGGTTAATCAATGAGGTGAACAGACAGTTATCTCCAAAAAAGGTTGGTGTTGATTTA ACTTTTGAAGATTTAAATAAAATAACAAAAATTTCCTTAAGCAATAGAGGATTAACAGGAGAAGTTCCACCAGAAATTAA AAATCTTGTATCTCTTCAAACTTTACTCTTATATTCTAATAATTTAACTGGTACGATTCCTTCTGAACTAGGAGAACTAA AGAATCTAACCGAGCTAAGATTAGATTATAACCAATTATCAGGTACAATTCCTGATGGACTTGGGAATATTGCATCTATT TCTTTGCAAAACAATAAATTAGTTGGTCAAATACCATTAAGCTTATATGAAAATAGAGTAGGAACAAATGAAGTAAATGT TGCTGGAAATCAAGTAACACTTAATAGTAAACAAGAAATCCCAAGCGTATACACGCCATATACTTTTGTTTACACTGAGA GTAATCCAAACGTAGGTGGCCAAATTAAAGCAACAAATAGTTTTTTATCGAATTTAACAAATGATATGAATTTCACACCA TTTTCATCAGGTAGTCCCACTTTTATTGATTTAAAAGTAATAAATATGTTTGACTCTGCTTTGTTTGCAGGTCACAACGT TACAATAACGGATACCAATAATGGCAAACAGCTTTATGATGGAGAATTGACTTCAGATGTGAGTATTCCGTTAACAAATT TAACCTCGGGAATTCATGTATTAAGTATTGTGCTTGATAACGCCACACAAAATCCCCATAATCAAGTTACTATTTTAATC GATATTTTACCAGTCGCAGCAGCAGATTTAACTGTTAAATATATAGATGAAACAGGGGTAGAAATCCGTGAGTCTCAAAC AGTTAGTGGAAACATTGGTGATTTTTTTGATGTAACAACTCCTGAATATAAATTAGAAATCGATAAATATGAATTAGACA GCTCTAAACTTCCAACAAATGGCATTGGAACGCTAAGTCAGGAAGCACAAATGGTCACTTATGTTTACAATAAAGTAGAC GGCGCGCCTGTCACAGTGAAATATGTTGATCAAGATGGTAAAGAGCTATCTCCTTCTGATACTTTGACAGGTAAAATAGA TGAACCATACAAAACAGAAGCAAAAGACATAGCAGGATTTACAATTGATGAAAGTAAGCTACCAGCGAATGCAAATGGGA ATTTTGTAGCAGAAGCTCAAACAGTCACTTATGTGTATAATAAAATACCAGCTTCTATTAAAGCACATGATTCCACTATT TATGTTGGTGATCAGTGGAATGCGGAGGATAATTTTGACAGTGCATTAGATAATTTTGGTAAGCCAGTTTCATTCAGTGA TGTAAATGTAGAGGGTACGGTAGATGTATCGAAAGTAGGCGTTTATCCTGTCACTTATACTTTTGACGGGGAATCGGTCA CTGTTAATATAACCGTAAAATCAAAAGCAATTCCAGAACCACCAATAACACCAGAACCACCAACAAAACCTATCACACCA GTAAGCCCTAATAATCCAACAACAGATGTACAAAAAGTACCAACCAAGAAAGCTGATACGTTGAAAATCACACCTGAAAA ACATAAACAATCGACAGTAGCAAGTAAATTAAAACTTCCTACTACTGGAGACAATCTCTTTGATAGTGTTATGTATAGTG TATTTGGTTTAATCGTTGTCTGTGTAGGATTTAGTTTATTCTTCTCGCGTAAAAAACAACATTAA
Upstream 100 bases:
>100_bases AAAATGTTCAAATCTGAATTAGAAATATGTGTATAAGTTACTTTCAAAATATATTTTAGTATACACTTTAAAGGGAATAA AACAAACAGGAGGTACATTC
Downstream 100 bases:
>100_bases AAAATAAATATTAACTAAGGCGCTCTTCCATGAAAAAGAAAGAGCGCCTTAGTTTTTTATTTAAATAGAGCCTCTTAAAG ATAATTCGACGGGAACTATT
Product: cell wall surface anchor family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MKKAFKCLSIVAISLSVIGGSPLTSLAFENDKQTSNEEQSQLRAEKASTDIVSSQDLGNQAWLINEVNRQLSPKKVGVDL TFEDLNKITKISLSNRGLTGEVPPEIKNLVSLQTLLLYSNNLTGTIPSELGELKNLTELRLDYNQLSGTIPDGLGNIASI SLQNNKLVGQIPLSLYENRVGTNEVNVAGNQVTLNSKQEIPSVYTPYTFVYTESNPNVGGQIKATNSFLSNLTNDMNFTP FSSGSPTFIDLKVINMFDSALFAGHNVTITDTNNGKQLYDGELTSDVSIPLTNLTSGIHVLSIVLDNATQNPHNQVTILI DILPVAAADLTVKYIDETGVEIRESQTVSGNIGDFFDVTTPEYKLEIDKYELDSSKLPTNGIGTLSQEAQMVTYVYNKVD GAPVTVKYVDQDGKELSPSDTLTGKIDEPYKTEAKDIAGFTIDESKLPANANGNFVAEAQTVTYVYNKIPASIKAHDSTI YVGDQWNAEDNFDSALDNFGKPVSFSDVNVEGTVDVSKVGVYPVTYTFDGESVTVNITVKSKAIPEPPITPEPPTKPITP VSPNNPTTDVQKVPTKKADTLKITPEKHKQSTVASKLKLPTTGDNLFDSVMYSVFGLIVVCVGFSLFFSRKKQH
Sequences:
>Translated_634_residues MKKAFKCLSIVAISLSVIGGSPLTSLAFENDKQTSNEEQSQLRAEKASTDIVSSQDLGNQAWLINEVNRQLSPKKVGVDL TFEDLNKITKISLSNRGLTGEVPPEIKNLVSLQTLLLYSNNLTGTIPSELGELKNLTELRLDYNQLSGTIPDGLGNIASI SLQNNKLVGQIPLSLYENRVGTNEVNVAGNQVTLNSKQEIPSVYTPYTFVYTESNPNVGGQIKATNSFLSNLTNDMNFTP FSSGSPTFIDLKVINMFDSALFAGHNVTITDTNNGKQLYDGELTSDVSIPLTNLTSGIHVLSIVLDNATQNPHNQVTILI DILPVAAADLTVKYIDETGVEIRESQTVSGNIGDFFDVTTPEYKLEIDKYELDSSKLPTNGIGTLSQEAQMVTYVYNKVD GAPVTVKYVDQDGKELSPSDTLTGKIDEPYKTEAKDIAGFTIDESKLPANANGNFVAEAQTVTYVYNKIPASIKAHDSTI YVGDQWNAEDNFDSALDNFGKPVSFSDVNVEGTVDVSKVGVYPVTYTFDGESVTVNITVKSKAIPEPPITPEPPTKPITP VSPNNPTTDVQKVPTKKADTLKITPEKHKQSTVASKLKLPTTGDNLFDSVMYSVFGLIVVCVGFSLFFSRKKQH >Mature_634_residues MKKAFKCLSIVAISLSVIGGSPLTSLAFENDKQTSNEEQSQLRAEKASTDIVSSQDLGNQAWLINEVNRQLSPKKVGVDL TFEDLNKITKISLSNRGLTGEVPPEIKNLVSLQTLLLYSNNLTGTIPSELGELKNLTELRLDYNQLSGTIPDGLGNIASI SLQNNKLVGQIPLSLYENRVGTNEVNVAGNQVTLNSKQEIPSVYTPYTFVYTESNPNVGGQIKATNSFLSNLTNDMNFTP FSSGSPTFIDLKVINMFDSALFAGHNVTITDTNNGKQLYDGELTSDVSIPLTNLTSGIHVLSIVLDNATQNPHNQVTILI DILPVAAADLTVKYIDETGVEIRESQTVSGNIGDFFDVTTPEYKLEIDKYELDSSKLPTNGIGTLSQEAQMVTYVYNKVD GAPVTVKYVDQDGKELSPSDTLTGKIDEPYKTEAKDIAGFTIDESKLPANANGNFVAEAQTVTYVYNKIPASIKAHDSTI YVGDQWNAEDNFDSALDNFGKPVSFSDVNVEGTVDVSKVGVYPVTYTFDGESVTVNITVKSKAIPEPPITPEPPTKPITP VSPNNPTTDVQKVPTKKADTLKITPEKHKQSTVASKLKLPTTGDNLFDSVMYSVFGLIVVCVGFSLFFSRKKQH
Specific function: Involved in several steps of L.monocytogenes infection [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 MucBP domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014755 - InterPro: IPR009459 - InterPro: IPR019931 - InterPro: IPR001899 [H]
Pfam domain/function: PF06458 MucBP [H]
EC number: NA
Molecular weight: Translated: 68879; Mature: 68879
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS50847 GRAM_POS_ANCHORING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAFKCLSIVAISLSVIGGSPLTSLAFENDKQTSNEEQSQLRAEKASTDIVSSQDLGNQ CCHHHHHHHHHEEEHEEECCCCHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC AWLINEVNRQLSPKKVGVDLTFEDLNKITKISLSNRGLTGEVPPEIKNLVSLQTLLLYSN EEEEEHHHCCCCCCCEEEEEEHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHEEEEECC NLTGTIPSELGELKNLTELRLDYNQLSGTIPDGLGNIASISLQNNKLVGQIPLSLYENRV CCCCCCHHHHHHHHCHHHHEEEHHHHCCCCCCCCCCEEEEEEECCEEEEEECHHHHHCCC GTNEVNVAGNQVTLNSKQEIPSVYTPYTFVYTESNPNVGGQIKATNSFLSNLTNDMNFTP CCCEEEECCCEEEECCHHCCCCEECCEEEEEECCCCCCCCEEEEHHHHHHHHCCCCCCCC FSSGSPTFIDLKVINMFDSALFAGHNVTITDTNNGKQLYDGELTSDVSIPLTNLTSGIHV CCCCCCCEEEEEEEEHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHCCHHEE LSIVLDNATQNPHNQVTILIDILPVAAADLTVKYIDETGVEIRESQTVSGNIGDFFDVTT EEEEECCCCCCCCCEEEEEEEEECCHHCCEEEEEECCCCCEEECCCEECCCCCCCCCCCC PEYKLEIDKYELDSSKLPTNGIGTLSQEAQMVTYVYNKVDGAPVTVKYVDQDGKELSPSD CCEEEEEEEEECCCCCCCCCCCCCCCHHHHEEEEEHHCCCCCEEEEEEECCCCCCCCCCC TLTGKIDEPYKTEAKDIAGFTIDESKLPANANGNFVAEAQTVTYVYNKIPASIKAHDSTI CEECCCCCCCCCCHHHHCCEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCCEEECCCEE YVGDQWNAEDNFDSALDNFGKPVSFSDVNVEGTVDVSKVGVYPVTYTFDGESVTVNITVK EECCCCCCCCCHHHHHHHCCCCCCCCCCCEECEEEEEHCCEEEEEEEECCCEEEEEEEEE SKAIPEPPITPEPPTKPITPVSPNNPTTDVQKVPTKKADTLKITPEKHKQSTVASKLKLP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCHHHHHHHHHHHEECC TTGDNLFDSVMYSVFGLIVVCVGFSLFFSRKKQH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKAFKCLSIVAISLSVIGGSPLTSLAFENDKQTSNEEQSQLRAEKASTDIVSSQDLGNQ CCHHHHHHHHHEEEHEEECCCCHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC AWLINEVNRQLSPKKVGVDLTFEDLNKITKISLSNRGLTGEVPPEIKNLVSLQTLLLYSN EEEEEHHHCCCCCCCEEEEEEHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHEEEEECC NLTGTIPSELGELKNLTELRLDYNQLSGTIPDGLGNIASISLQNNKLVGQIPLSLYENRV CCCCCCHHHHHHHHCHHHHEEEHHHHCCCCCCCCCCEEEEEEECCEEEEEECHHHHHCCC GTNEVNVAGNQVTLNSKQEIPSVYTPYTFVYTESNPNVGGQIKATNSFLSNLTNDMNFTP CCCEEEECCCEEEECCHHCCCCEECCEEEEEECCCCCCCCEEEEHHHHHHHHCCCCCCCC FSSGSPTFIDLKVINMFDSALFAGHNVTITDTNNGKQLYDGELTSDVSIPLTNLTSGIHV CCCCCCCEEEEEEEEHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCCCCHHHHCCHHEE LSIVLDNATQNPHNQVTILIDILPVAAADLTVKYIDETGVEIRESQTVSGNIGDFFDVTT EEEEECCCCCCCCCEEEEEEEEECCHHCCEEEEEECCCCCEEECCCEECCCCCCCCCCCC PEYKLEIDKYELDSSKLPTNGIGTLSQEAQMVTYVYNKVDGAPVTVKYVDQDGKELSPSD CCEEEEEEEEECCCCCCCCCCCCCCCHHHHEEEEEHHCCCCCEEEEEEECCCCCCCCCCC TLTGKIDEPYKTEAKDIAGFTIDESKLPANANGNFVAEAQTVTYVYNKIPASIKAHDSTI CEECCCCCCCCCCHHHHCCEEEECCCCCCCCCCCEEEEEEEEEEEECCCCCCEEECCCEE YVGDQWNAEDNFDSALDNFGKPVSFSDVNVEGTVDVSKVGVYPVTYTFDGESVTVNITVK EECCCCCCCCCHHHHHHHCCCCCCCCCCCEECEEEEEHCCEEEEEEEECCCEEEEEEEEE SKAIPEPPITPEPPTKPITPVSPNNPTTDVQKVPTKKADTLKITPEKHKQSTVASKLKLP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCHHHHHHHHHHHEECC TTGDNLFDSVMYSVFGLIVVCVGFSLFFSRKKQH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]