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The map label for this gene is fliD [H]

Identifier: 116872096

GI number: 116872096

Start: 704796

End: 706085

Strand: Direct

Name: fliD [H]

Synonym: lwe0676

Alternate gene names: 116872096

Gene position: 704796-706085 (Clockwise)

Preceding gene: 116872095

Following gene: 116872097

Centisome position: 25.04

GC content: 37.83

Gene sequence:

>1290_bases
GTGGGAAGTTCGATTGCAAGCAGCTTAATGGATCCAACGCAATATTATTCGCAGTTTATTAGTCTTCAAAAAGCCAGTTT
AGAAAAAGCAAAAACACCTTATCAAAACCAGATTTCTAGCTATCAATCACGAATTGACCTTTACGCCAGCTTGAAAAACG
CTTTATCTGAGTCGATGAAAACGATGAGTTCTTTCACGACGTACGAGAGTAAAACAAAGCTCGCGACCTCTTCGAATGAA
ACTAGCTTCACTGTTTCTTCAACTAGTAGTTCCGTCAATGGCAGTTATTCCATTGAAGTTCAAAACCTTGCAACTGCAGA
TACGTATAATAAATCTGTGCCCGATATTGAAGCGAAAATTGGTGTCAGTGGAACCATCAAAATTAATGGTAAAGAAATCA
AAGTTGATGCTGATAACTCAATGAAAAATGTGATGAACACAATCAATGGTGCAGGTGCGAAGGTAAATATTTATACGCTA
GGTGAAAATATGGTCGTAACTGCTGCAACGACTGGTGTTGAAAATAGTATTAAATTTGAAGGTGATTCGGCTGTTTTAGA
GGCACTTGGCTTAGTACAAAATTCTCCAGATCATTTAGCGGCAGAAGATGCAAAACTGCGAATTAACGGTGCAACAGTAA
CAAGCGCGACAAATAAAGTAACCAACTACATCCCCGGCGTGACCATTAACCTAAAAAAAGAAACAACTGGTGCTGAAAAA
TTAACCATTCAAGATCAAAGTGATGAAAAAGCAGCCAGCATGATTACAAGTTTTGTAAATACATACAATGCACTAACAAG
CACAATGAAAACGTACACGGGAAAAGGAACCATTTTACAAGCATCTGCAGCAGACCTTGAAGCTAATCGCGCGCTAAACA
ACGTATTTCAACATAAAAAAGACGGAAATACATTATTTGATTTTGGTATAAGCGTGGATAAAGAAGGCGTGTTAAAAGTA
GATGAAACCGCAATGAAAAAAATGGTAGCTGAAGATCCAACAGCCGTAGAAAGATTTTTCTTTGGTATTGGCGGAGTTGG
CGATGAACTTTATCAATCATTGAATAAAACATTTGGTTCGACTGGATTCATCAGTGATGAAACGACCTCGATGACGAATG
AAATCAATAAATTAAACCTTAAGCTAACAGATATTACGAGCCGAAATGACACGTTACTAACGAACATAACGGATCAGTAC
AACAAATGGCTAGAAATGATGCAAGCCATGCAAAGCGACGCAATGACATTGGATGCACTTATTGACGGTATGAACAGTTC
TAATAAATAA

Upstream 100 bases:

>100_bases
GCAATTTAAATAAAACATCTATTGCATACCAAGCGGCTCTTCAATCGAGTGTGATGGTACAAAAATTAAGCATTCTAAAT
TATATGTGAGGTGAAACCAA

Downstream 100 bases:

>100_bases
AAATGGTAGGTGAAATAAATGCAAGCTTGGAAACGATATACGCAAAACGAATTAAATACGAGCAACCCCATTAAAAACAC
CATTTATATATACGAACGTT

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MGSSIASSLMDPTQYYSQFISLQKASLEKAKTPYQNQISSYQSRIDLYASLKNALSESMKTMSSFTTYESKTKLATSSNE
TSFTVSSTSSSVNGSYSIEVQNLATADTYNKSVPDIEAKIGVSGTIKINGKEIKVDADNSMKNVMNTINGAGAKVNIYTL
GENMVVTAATTGVENSIKFEGDSAVLEALGLVQNSPDHLAAEDAKLRINGATVTSATNKVTNYIPGVTINLKKETTGAEK
LTIQDQSDEKAASMITSFVNTYNALTSTMKTYTGKGTILQASAADLEANRALNNVFQHKKDGNTLFDFGISVDKEGVLKV
DETAMKKMVAEDPTAVERFFFGIGGVGDELYQSLNKTFGSTGFISDETTSMTNEINKLNLKLTDITSRNDTLLTNITDQY
NKWLEMMQAMQSDAMTLDALIDGMNSSNK

Sequences:

>Translated_429_residues
MGSSIASSLMDPTQYYSQFISLQKASLEKAKTPYQNQISSYQSRIDLYASLKNALSESMKTMSSFTTYESKTKLATSSNE
TSFTVSSTSSSVNGSYSIEVQNLATADTYNKSVPDIEAKIGVSGTIKINGKEIKVDADNSMKNVMNTINGAGAKVNIYTL
GENMVVTAATTGVENSIKFEGDSAVLEALGLVQNSPDHLAAEDAKLRINGATVTSATNKVTNYIPGVTINLKKETTGAEK
LTIQDQSDEKAASMITSFVNTYNALTSTMKTYTGKGTILQASAADLEANRALNNVFQHKKDGNTLFDFGISVDKEGVLKV
DETAMKKMVAEDPTAVERFFFGIGGVGDELYQSLNKTFGSTGFISDETTSMTNEINKLNLKLTDITSRNDTLLTNITDQY
NKWLEMMQAMQSDAMTLDALIDGMNSSNK
>Mature_428_residues
GSSIASSLMDPTQYYSQFISLQKASLEKAKTPYQNQISSYQSRIDLYASLKNALSESMKTMSSFTTYESKTKLATSSNET
SFTVSSTSSSVNGSYSIEVQNLATADTYNKSVPDIEAKIGVSGTIKINGKEIKVDADNSMKNVMNTINGAGAKVNIYTLG
ENMVVTAATTGVENSIKFEGDSAVLEALGLVQNSPDHLAAEDAKLRINGATVTSATNKVTNYIPGVTINLKKETTGAEKL
TIQDQSDEKAASMITSFVNTYNALTSTMKTYTGKGTILQASAADLEANRALNNVFQHKKDGNTLFDFGISVDKEGVLKVD
ETAMKKMVAEDPTAVERFFFGIGGVGDELYQSLNKTFGSTGFISDETTSMTNEINKLNLKLTDITSRNDTLLTNITDQYN
KWLEMMQAMQSDAMTLDALIDGMNSSNK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=447, Percent_Identity=25.0559284116331, Blast_Score=83, Evalue=4e-17,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 46363; Mature: 46232

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSSIASSLMDPTQYYSQFISLQKASLEKAKTPYQNQISSYQSRIDLYASLKNALSESMK
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMSSFTTYESKTKLATSSNETSFTVSSTSSSVNGSYSIEVQNLATADTYNKSVPDIEAKI
HHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCEEEEEEECCEECCCCCCCCCCCEEEE
GVSGTIKINGKEIKVDADNSMKNVMNTINGAGAKVNIYTLGENMVVTAATTGVENSIKFE
CCEEEEEECCEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCEEEC
GDSAVLEALGLVQNSPDHLAAEDAKLRINGATVTSATNKVTNYIPGVTINLKKETTGAEK
CCHHHHHHHHHHCCCCCCCCCCCCEEEECCEEEECHHHHHHHHCCCCEEEEECCCCCCEE
LTIQDQSDEKAASMITSFVNTYNALTSTMKTYTGKGTILQASAADLEANRALNNVFQHKK
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCC
DGNTLFDFGISVDKEGVLKVDETAMKKMVAEDPTAVERFFFGIGGVGDELYQSLNKTFGS
CCCEEEEECCCCCCCCCEEECHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCC
TGFISDETTSMTNEINKLNLKLTDITSRNDTLLTNITDQYNKWLEMMQAMQSDAMTLDAL
CCCCCCCHHHHHHHHHEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCEEHHHH
IDGMNSSNK
HHCCCCCCC
>Mature Secondary Structure 
GSSIASSLMDPTQYYSQFISLQKASLEKAKTPYQNQISSYQSRIDLYASLKNALSESMK
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMSSFTTYESKTKLATSSNETSFTVSSTSSSVNGSYSIEVQNLATADTYNKSVPDIEAKI
HHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCEEEEEEECCEECCCCCCCCCCCEEEE
GVSGTIKINGKEIKVDADNSMKNVMNTINGAGAKVNIYTLGENMVVTAATTGVENSIKFE
CCEEEEEECCEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCCCCCEEEC
GDSAVLEALGLVQNSPDHLAAEDAKLRINGATVTSATNKVTNYIPGVTINLKKETTGAEK
CCHHHHHHHHHHCCCCCCCCCCCCEEEECCEEEECHHHHHHHHCCCCEEEEECCCCCCEE
LTIQDQSDEKAASMITSFVNTYNALTSTMKTYTGKGTILQASAADLEANRALNNVFQHKK
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCC
DGNTLFDFGISVDKEGVLKVDETAMKKMVAEDPTAVERFFFGIGGVGDELYQSLNKTFGS
CCCEEEEECCCCCCCCCEEECHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCC
TGFISDETTSMTNEINKLNLKLTDITSRNDTLLTNITDQYNKWLEMMQAMQSDAMTLDAL
CCCCCCCHHHHHHHHHEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHCCEEHHHH
IDGMNSSNK
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10678962; 10984043 [H]