Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116872097

Identifier: 116872097

GI number: 116872097

Start: 706104

End: 706490

Strand: Direct

Name: 116872097

Synonym: lwe0677

Alternate gene names: NA

Gene position: 706104-706490 (Clockwise)

Preceding gene: 116872096

Following gene: 116872098

Centisome position: 25.09

GC content: 31.01

Gene sequence:

>387_bases
ATGCAAGCTTGGAAACGATATACGCAAAACGAATTAAATACGAGCAACCCCATTAAAAACACCATTTATATATACGAACG
TTGTATTATTGAATTTAAAAAATTAGACAAAGCACTTGCGAAATTACATTTTTCAGAAGCAGATCTTATTCTCGATAAAA
TGGAAAAAATCTTTGAAGAATTAAAATTACAACTAAATCCAGAAGCTGGACAAGAATTATACGATAATATTTTCGGTTTA
TATGAATGGATTTCTGAACAAATTCGACAAATGCAATTACTAAAACAACCAGTTAATATTGATACAATCATTCACGTTAT
CACGCAGCTAAAAGAAGGCTACGAGGGAGTGATGAAACATGAATCAAACAAAGACACTTTTGGCTGA

Upstream 100 bases:

>100_bases
GCTAGAAATGATGCAAGCCATGCAAAGCGACGCAATGACATTGGATGCACTTATTGACGGTATGAACAGTTCTAATAAAT
AAAAATGGTAGGTGAAATAA

Downstream 100 bases:

>100_bases
GCTAAAAACCATGTTTCATTCGACGGGGCAATTAAACGTTTCTCTCGAAGCATATCAAGCGAAACTAAATGAACTACTAA
AAAGTACCGAACATTTACCA

Product: flagellar protein FliS, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MQAWKRYTQNELNTSNPIKNTIYIYERCIIEFKKLDKALAKLHFSEADLILDKMEKIFEELKLQLNPEAGQELYDNIFGL
YEWISEQIRQMQLLKQPVNIDTIIHVITQLKEGYEGVMKHESNKDTFG

Sequences:

>Translated_128_residues
MQAWKRYTQNELNTSNPIKNTIYIYERCIIEFKKLDKALAKLHFSEADLILDKMEKIFEELKLQLNPEAGQELYDNIFGL
YEWISEQIRQMQLLKQPVNIDTIIHVITQLKEGYEGVMKHESNKDTFG
>Mature_128_residues
MQAWKRYTQNELNTSNPIKNTIYIYERCIIEFKKLDKALAKLHFSEADLILDKMEKIFEELKLQLNPEAGQELYDNIFGL
YEWISEQIRQMQLLKQPVNIDTIIHVITQLKEGYEGVMKHESNKDTFG

Specific function: Unknown

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15197; Mature: 15197

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAWKRYTQNELNTSNPIKNTIYIYERCIIEFKKLDKALAKLHFSEADLILDKMEKIFEE
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LKLQLNPEAGQELYDNIFGLYEWISEQIRQMQLLKQPVNIDTIIHVITQLKEGYEGVMKH
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
ESNKDTFG
CCCCCCCC
>Mature Secondary Structure
MQAWKRYTQNELNTSNPIKNTIYIYERCIIEFKKLDKALAKLHFSEADLILDKMEKIFEE
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LKLQLNPEAGQELYDNIFGLYEWISEQIRQMQLLKQPVNIDTIIHVITQLKEGYEGVMKH
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
ESNKDTFG
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA