| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872097
Identifier: 116872097
GI number: 116872097
Start: 706104
End: 706490
Strand: Direct
Name: 116872097
Synonym: lwe0677
Alternate gene names: NA
Gene position: 706104-706490 (Clockwise)
Preceding gene: 116872096
Following gene: 116872098
Centisome position: 25.09
GC content: 31.01
Gene sequence:
>387_bases ATGCAAGCTTGGAAACGATATACGCAAAACGAATTAAATACGAGCAACCCCATTAAAAACACCATTTATATATACGAACG TTGTATTATTGAATTTAAAAAATTAGACAAAGCACTTGCGAAATTACATTTTTCAGAAGCAGATCTTATTCTCGATAAAA TGGAAAAAATCTTTGAAGAATTAAAATTACAACTAAATCCAGAAGCTGGACAAGAATTATACGATAATATTTTCGGTTTA TATGAATGGATTTCTGAACAAATTCGACAAATGCAATTACTAAAACAACCAGTTAATATTGATACAATCATTCACGTTAT CACGCAGCTAAAAGAAGGCTACGAGGGAGTGATGAAACATGAATCAAACAAAGACACTTTTGGCTGA
Upstream 100 bases:
>100_bases GCTAGAAATGATGCAAGCCATGCAAAGCGACGCAATGACATTGGATGCACTTATTGACGGTATGAACAGTTCTAATAAAT AAAAATGGTAGGTGAAATAA
Downstream 100 bases:
>100_bases GCTAAAAACCATGTTTCATTCGACGGGGCAATTAAACGTTTCTCTCGAAGCATATCAAGCGAAACTAAATGAACTACTAA AAAGTACCGAACATTTACCA
Product: flagellar protein FliS, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MQAWKRYTQNELNTSNPIKNTIYIYERCIIEFKKLDKALAKLHFSEADLILDKMEKIFEELKLQLNPEAGQELYDNIFGL YEWISEQIRQMQLLKQPVNIDTIIHVITQLKEGYEGVMKHESNKDTFG
Sequences:
>Translated_128_residues MQAWKRYTQNELNTSNPIKNTIYIYERCIIEFKKLDKALAKLHFSEADLILDKMEKIFEELKLQLNPEAGQELYDNIFGL YEWISEQIRQMQLLKQPVNIDTIIHVITQLKEGYEGVMKHESNKDTFG >Mature_128_residues MQAWKRYTQNELNTSNPIKNTIYIYERCIIEFKKLDKALAKLHFSEADLILDKMEKIFEELKLQLNPEAGQELYDNIFGL YEWISEQIRQMQLLKQPVNIDTIIHVITQLKEGYEGVMKHESNKDTFG
Specific function: Unknown
COG id: COG1516
COG function: function code NUO; Flagellin-specific chaperone FliS
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15197; Mature: 15197
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAWKRYTQNELNTSNPIKNTIYIYERCIIEFKKLDKALAKLHFSEADLILDKMEKIFEE CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LKLQLNPEAGQELYDNIFGLYEWISEQIRQMQLLKQPVNIDTIIHVITQLKEGYEGVMKH HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC ESNKDTFG CCCCCCCC >Mature Secondary Structure MQAWKRYTQNELNTSNPIKNTIYIYERCIIEFKKLDKALAKLHFSEADLILDKMEKIFEE CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LKLQLNPEAGQELYDNIFGLYEWISEQIRQMQLLKQPVNIDTIIHVITQLKEGYEGVMKH HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC ESNKDTFG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA