| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872026
Identifier: 116872026
GI number: 116872026
Start: 642765
End: 643298
Strand: Direct
Name: 116872026
Synonym: lwe0606
Alternate gene names: NA
Gene position: 642765-643298 (Clockwise)
Preceding gene: 116872025
Following gene: 116872027
Centisome position: 22.84
GC content: 33.33
Gene sequence:
>534_bases TTGGAAAGAAAATTAATAGAGGAAATAAATTTACTTGAAAGTAAAAAGCTAATTATAAATTTGAATATTGTTGCCATTGT TATTGTGCTTGTATTAACCGTTTTAGGGTTGGCTTTTTCAGGAGGTTTTGAAATTGCAAATGGCTTTGAGGGAGTGATCT GGCTGTGTTTGGGTTATTTGCTATCCCTTGTTATTCATGAGGGTGTTCATGGAATTTTCTTTAAAGCATTTCATCCAGAA GGAAAAGTGAAATTTGGCTTTAAAAATGGAATGGCTTATGCGACAAGTCCGGGATCATTTTATACAAAATCGCAATTCTT TATTATTTCGATTGCGCCATTTATTGTTCTTACAGGTTTATTCATTTTCTTACGTTTTCTCGGGGTGAATGAAGCGGTCA TCTATTTGATTTTTGCACTACATACTTCAGGTTGTGTGGGCGATTTTTATTATTGTATTTTGTTGCTTAATCGTCCGACT GGAATTCTTGTAGAAGATACCGAAAAAGGGATTAATTTTTATTCAGAAGGTTAA
Upstream 100 bases:
>100_bases ACTTGGGTATTTCTCCACTGTGACATAGAATGCCGACAAGAAGTATTGTATAATAAAATTAGTTAAAATACCAGCGTTTT TTATCAAAGGAGGAGCATAC
Downstream 100 bases:
>100_bases GCTTGGTAACGATTACAACAAAGTGTTAGAATAAGGATATACTTTTCGAAAGAGGTGCTTGATTTGAAACGAATAACAAT TGGTAACAGCGCTTTAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MERKLIEEINLLESKKLIINLNIVAIVIVLVLTVLGLAFSGGFEIANGFEGVIWLCLGYLLSLVIHEGVHGIFFKAFHPE GKVKFGFKNGMAYATSPGSFYTKSQFFIISIAPFIVLTGLFIFLRFLGVNEAVIYLIFALHTSGCVGDFYYCILLLNRPT GILVEDTEKGINFYSEG
Sequences:
>Translated_177_residues MERKLIEEINLLESKKLIINLNIVAIVIVLVLTVLGLAFSGGFEIANGFEGVIWLCLGYLLSLVIHEGVHGIFFKAFHPE GKVKFGFKNGMAYATSPGSFYTKSQFFIISIAPFIVLTGLFIFLRFLGVNEAVIYLIFALHTSGCVGDFYYCILLLNRPT GILVEDTEKGINFYSEG >Mature_177_residues MERKLIEEINLLESKKLIINLNIVAIVIVLVLTVLGLAFSGGFEIANGFEGVIWLCLGYLLSLVIHEGVHGIFFKAFHPE GKVKFGFKNGMAYATSPGSFYTKSQFFIISIAPFIVLTGLFIFLRFLGVNEAVIYLIFALHTSGCVGDFYYCILLLNRPT GILVEDTEKGINFYSEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19643; Mature: 19643
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERKLIEEINLLESKKLIINLNIVAIVIVLVLTVLGLAFSGGFEIANGFEGVIWLCLGYL CCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LSLVIHEGVHGIFFKAFHPEGKVKFGFKNGMAYATSPGSFYTKSQFFIISIAPFIVLTGL HHHHHHCCCCCEEEEEECCCCCEEEEECCCEEEEECCCCCEECCEEEEEEHHHHHHHHHH FIFLRFLGVNEAVIYLIFALHTSGCVGDFYYCILLLNRPTGILVEDTEKGINFYSEG HHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure MERKLIEEINLLESKKLIINLNIVAIVIVLVLTVLGLAFSGGFEIANGFEGVIWLCLGYL CCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LSLVIHEGVHGIFFKAFHPEGKVKFGFKNGMAYATSPGSFYTKSQFFIISIAPFIVLTGL HHHHHHCCCCCEEEEEECCCCCEEEEECCCEEEEECCCCCEECCEEEEEEHHHHHHHHHH FIFLRFLGVNEAVIYLIFALHTSGCVGDFYYCILLLNRPTGILVEDTEKGINFYSEG HHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA