| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is frwC [H]
Identifier: 116872019
GI number: 116872019
Start: 635646
End: 636707
Strand: Direct
Name: frwC [H]
Synonym: lwe0599
Alternate gene names: 116872019
Gene position: 635646-636707 (Clockwise)
Preceding gene: 116872018
Following gene: 116872020
Centisome position: 22.59
GC content: 41.9
Gene sequence:
>1062_bases ATGAGAACACTTAAGTTTTTGCAAAAGCATTTGATGACAGCCACTTCTTATATGATTCCATTTGTGGTAGCTGGAGGGAT TTTATTTGCACTATCTGTTATGTTGAGCGGACAAGCCGCAGTACCTGACGCGGGGTGGTTAGCAAAATTAAACCAAATTG GTGCAGCTGGTCTCGCCCTTTTTATTCCGATTCTTGGTGGTTACATAGCATTTAGTATGGCGGATAAGCCAGGTCTTGCA CCTGGGATGATTGGCGCATATTTAGCAAACGAAATTGGTGCTGGATTTATCGGTGGGATTATCGCTGGTTTCTTAGCTGG TTTTGTCGTAATTCAATTAAAGAAAATTAAATTAGCTCCATCTATGAGAACACTCGGATCAATTTTTATTTATCCATTAC TTGGGACTTTAATTACAGGTGGAATTATCGTCTTCCTCATTGGAGAACCAATCTCAGGTTTTATGGACTGGATGACAAAT GCACTAAATAGTTTATCTGGCGCTGCAAAAGTTCCACTAGGGGCACTTCTTGGTGCAATGATTTCGTTTGATATGGGTGG CCCTGTAAATAAAGTAGCAGCGACATTTGCGCAAACTCAAGTGGACACACTCCCTTATTTAATGGGTGGGGTTGGAGTAG CGATTTGTGTACCACCAATAGGACTTGGAGTAGCAACTCTTCTGTTTCCTAAAAAATTTACTCGTGTGGAAAAAGATTCT GGAATTGCGGCACTTTTGATGGGAAGCGTTGGTATCACGGAAGGAGCCATTCCTTTTGCAACAGCTGATCCATTACGAGT TATCCCTTCGATTATGGTTGGTTCGATTGTAGGTAACGTTTCGGCTTTCTTATTCGGTTGTTTAAACCATGCGCCTTGGG GTGGATTAATCGTTTTACCTGTGGTCGATAACCGAATTGGCTATGTTGCTTCTATTGCGCTTGGAGCTGTTGTGACGGCA ATTATGCTCCGGATTTTGAAGAAAGATGCCACAGAGCTTGACGAGGCACTGGAAGAAGGGCAAGACATCGATGATTTAGA TATTAATTTTGAAGATATTTAG
Upstream 100 bases:
>100_bases AAGATTATTAATGCATGAAGATTTCCGAATGAAATTAAGTGAGTTAGACGACACTGCAACAGTGGCACTATTAAACAAAA GTGTGAAGGAGGATAACTAA
Downstream 100 bases:
>100_bases AAAGGATGATAATAATGAAAATTGTAGCAGTAACTTCCTGCCCAAGCGGTGTGGCGCATACGTATATGTCGGCAGAATCA CTTGAACTCTCCGCTAAAAA
Product: putative fructose-like permease EIIC subunit 2
Products: NA
Alternate protein names: PTS system fructose-like EIIC component 2 [H]
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MRTLKFLQKHLMTATSYMIPFVVAGGILFALSVMLSGQAAVPDAGWLAKLNQIGAAGLALFIPILGGYIAFSMADKPGLA PGMIGAYLANEIGAGFIGGIIAGFLAGFVVIQLKKIKLAPSMRTLGSIFIYPLLGTLITGGIIVFLIGEPISGFMDWMTN ALNSLSGAAKVPLGALLGAMISFDMGGPVNKVAATFAQTQVDTLPYLMGGVGVAICVPPIGLGVATLLFPKKFTRVEKDS GIAALLMGSVGITEGAIPFATADPLRVIPSIMVGSIVGNVSAFLFGCLNHAPWGGLIVLPVVDNRIGYVASIALGAVVTA IMLRILKKDATELDEALEEGQDIDDLDINFEDI
Sequences:
>Translated_353_residues MRTLKFLQKHLMTATSYMIPFVVAGGILFALSVMLSGQAAVPDAGWLAKLNQIGAAGLALFIPILGGYIAFSMADKPGLA PGMIGAYLANEIGAGFIGGIIAGFLAGFVVIQLKKIKLAPSMRTLGSIFIYPLLGTLITGGIIVFLIGEPISGFMDWMTN ALNSLSGAAKVPLGALLGAMISFDMGGPVNKVAATFAQTQVDTLPYLMGGVGVAICVPPIGLGVATLLFPKKFTRVEKDS GIAALLMGSVGITEGAIPFATADPLRVIPSIMVGSIVGNVSAFLFGCLNHAPWGGLIVLPVVDNRIGYVASIALGAVVTA IMLRILKKDATELDEALEEGQDIDDLDINFEDI >Mature_353_residues MRTLKFLQKHLMTATSYMIPFVVAGGILFALSVMLSGQAAVPDAGWLAKLNQIGAAGLALFIPILGGYIAFSMADKPGLA PGMIGAYLANEIGAGFIGGIIAGFLAGFVVIQLKKIKLAPSMRTLGSIFIYPLLGTLITGGIIVFLIGEPISGFMDWMTN ALNSLSGAAKVPLGALLGAMISFDMGGPVNKVAATFAQTQVDTLPYLMGGVGVAICVPPIGLGVATLLFPKKFTRVEKDS GIAALLMGSVGITEGAIPFATADPLRVIPSIMVGSIVGNVSAFLFGCLNHAPWGGLIVLPVVDNRIGYVASIALGAVVTA IMLRILKKDATELDEALEEGQDIDDLDINFEDI
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane [H]
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1790386, Length=336, Percent_Identity=51.1904761904762, Blast_Score=295, Evalue=2e-81, Organism=Escherichia coli, GI1788492, Length=326, Percent_Identity=42.638036809816, Blast_Score=231, Evalue=4e-62, Organism=Escherichia coli, GI1786951, Length=353, Percent_Identity=33.4277620396601, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI87082348, Length=303, Percent_Identity=35.6435643564356, Blast_Score=163, Evalue=2e-41, Organism=Escherichia coli, GI1788729, Length=376, Percent_Identity=28.4574468085106, Blast_Score=120, Evalue=1e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013014 - InterPro: IPR006327 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36596; Mature: 36596
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLKFLQKHLMTATSYMIPFVVAGGILFALSVMLSGQAAVPDAGWLAKLNQIGAAGLAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH FIPILGGYIAFSMADKPGLAPGMIGAYLANEIGAGFIGGIIAGFLAGFVVIQLKKIKLAP HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC SMRTLGSIFIYPLLGTLITGGIIVFLIGEPISGFMDWMTNALNSLSGAAKVPLGALLGAM CHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH ISFDMGGPVNKVAATFAQTQVDTLPYLMGGVGVAICVPPIGLGVATLLFPKKFTRVEKDS HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCCC GIAALLMGSVGITEGAIPFATADPLRVIPSIMVGSIVGNVSAFLFGCLNHAPWGGLIVLP CHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE VVDNRIGYVASIALGAVVTAIMLRILKKDATELDEALEEGQDIDDLDINFEDI EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRTLKFLQKHLMTATSYMIPFVVAGGILFALSVMLSGQAAVPDAGWLAKLNQIGAAGLAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH FIPILGGYIAFSMADKPGLAPGMIGAYLANEIGAGFIGGIIAGFLAGFVVIQLKKIKLAP HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC SMRTLGSIFIYPLLGTLITGGIIVFLIGEPISGFMDWMTNALNSLSGAAKVPLGALLGAM CHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH ISFDMGGPVNKVAATFAQTQVDTLPYLMGGVGVAICVPPIGLGVATLLFPKKFTRVEKDS HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCCC GIAALLMGSVGITEGAIPFATADPLRVIPSIMVGSIVGNVSAFLFGCLNHAPWGGLIVLP CHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE VVDNRIGYVASIALGAVVTAIMLRILKKDATELDEALEEGQDIDDLDINFEDI EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7773398 [H]