| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871977
Identifier: 116871977
GI number: 116871977
Start: 596061
End: 597830
Strand: Direct
Name: 116871977
Synonym: lwe0557
Alternate gene names: NA
Gene position: 596061-597830 (Clockwise)
Preceding gene: 116871976
Following gene: 116871978
Centisome position: 21.18
GC content: 37.01
Gene sequence:
>1770_bases ATGATGGAGTCCGAGAGCAGACGTCTTTTACAAAGTATGCTAAACGGAGCGGCAGAAGTTATTAGTAAAAAAGACGAGCT TAATAGAATAAATGTTTTTCCAGTAGCAGATGGCGATACTGGTAGTAATCTGGCTTCTTTAATGCAAGCGATTATTGATA ATGTTGCGCCAAAGGAATACTCCACAAAAGAATTACTAGAGGAAGTTGCAAATGCTGCACTTATTGGAGCACGAGGCAAT TCTGGGATGATTTTTGCCCAATACTTAACTGCGGTTGCAGAAAGTTATCATCATTTGGAATCAACTTTTGAAGGATTAGT TCAAGCATTTCAAAAAGCGGTCCATAAAGCATATGACGCCTTACTAGATCCGAAAGAAGGTACCATTTTGTCAGTGATGA AAGCTTGGTCTGAGGCTCTTGCGGGGTCATATGAGCAAGAGCGTTCTTTTCCACAATCGTTGTTAAATGCGCAAGTAGTG GCTGAGAAGGCGTTAATTAATACAGAATTTCAAATGCCTATTTTACGGAAAAATCGCTTAGTAGATTCGGGCGCTAAAGG TTTTTATTACTTTATTGCTGGTTTAACAAATGCTTATTGTGGTGAAGCTGTTTCGATTCCTGTAAGTTTTTCGGAAAAGA AAGATATCATTCAACCTAGCCATTTTGAAACGAATGAACCGCTATATCGCTATTGTTCCGAATTTATCATCAAACAAGCG TCCATCTCACAACAAACATTACGTGAAGTTCTTGCTTCTAAAGGTGATTCTCTAGTGATTGCAGGTAATGAAAAACAAAT TAAAATTCATATTCATACAAATGAACCTCAAGAAGTTTTACGTTTATTATCTGCATATGGCGTGATGACTTATCAAAAAG TAGATGATATGAAACTTCAATATGAAGTAACAAAAGCACCTCGCGCAAAAATTGCTATCGTAACAGATTCCATTGCTGAT TTACCAGAAAAATTTTTACTGGACCATCAAGTGCATGTGTTGCCAATGAACATTTTAGCAGGGGAAGAAAGTTTTCTTGA TAAATTAACTGTCGGACCAGCAATGATGAAAGAAAAGCTAGAACAACAGTGGAAAATGAGTACAGCCCAACCAACAATAC GGTCAGTGGATGCGCTACTCTCATTTTTAGAAAATAAATATGAACATGTACTAGTTATCACCGTCGCATCTAAGTTAAGT GGAACGTATCAATTAGTTAAACAACGAATACAAGGACGTAACTTATCTTCCAAATGGATACAAGTCATTGATTCAAGATT AAATTCTGTTGCTGAAGGGCTTTTAGTAAAGCAAGCAGTAGAATTAATAGAAATTGGTGAATCATTTGAAAAAGTGACGC AAAAGGTAAAACAATTGATTGAATCGTCATTTATCTATGTGGCAGTGGCAGATTTGTCGCCCATGGTGCAATCCGGTAGA ATTCCGCGCGTTTTAGGAAAGATAGCGCAAAAATTGTCTTTACATCCGATTGTTAGCTTAGATGAATCTGGGAACGGAAA ATTAATAGGTGTATCTTTTAGTCAAAAACAAAGTATGAAAAAAATAATTAAAAAAGTAACAAAACTACAACTTAAAGAGC TTGCTGTTACACATGTTTGCTCTATAAATGATGCGAAACTTTGGCAGAAGCAACTTGAAAAAGAAACAGGTCGAAATAGC TATCTTGTAGATAGTTCGGCTGCAATTGCGATTAGCGCCGGACTGGGAAGTGTCGCAGTCGCTGGCATTAAAGAGGAGGA AACAATATGA
Upstream 100 bases:
>100_bases TGACAGTAATTGATTTGATTTGGGGAACAGCAGTAACAACTGTAACTTCTGTCATTGTTTACTTTATTAATCTTCATTTC TTCTCGGGGGCAGGTTCATA
Downstream 100 bases:
>100_bases TGTACTGGATAGTAGCTCTTGCTTTACTTGTTTATTTTGTACTCTGGTTTATTATTTCAAAAGTGAAAGGTAAGTATTCC TTAGTAGATATTGCTTGGGG
Product: DAK2/DegV domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MMESESRRLLQSMLNGAAEVISKKDELNRINVFPVADGDTGSNLASLMQAIIDNVAPKEYSTKELLEEVANAALIGARGN SGMIFAQYLTAVAESYHHLESTFEGLVQAFQKAVHKAYDALLDPKEGTILSVMKAWSEALAGSYEQERSFPQSLLNAQVV AEKALINTEFQMPILRKNRLVDSGAKGFYYFIAGLTNAYCGEAVSIPVSFSEKKDIIQPSHFETNEPLYRYCSEFIIKQA SISQQTLREVLASKGDSLVIAGNEKQIKIHIHTNEPQEVLRLLSAYGVMTYQKVDDMKLQYEVTKAPRAKIAIVTDSIAD LPEKFLLDHQVHVLPMNILAGEESFLDKLTVGPAMMKEKLEQQWKMSTAQPTIRSVDALLSFLENKYEHVLVITVASKLS GTYQLVKQRIQGRNLSSKWIQVIDSRLNSVAEGLLVKQAVELIEIGESFEKVTQKVKQLIESSFIYVAVADLSPMVQSGR IPRVLGKIAQKLSLHPIVSLDESGNGKLIGVSFSQKQSMKKIIKKVTKLQLKELAVTHVCSINDAKLWQKQLEKETGRNS YLVDSSAAIAISAGLGSVAVAGIKEEETI
Sequences:
>Translated_589_residues MMESESRRLLQSMLNGAAEVISKKDELNRINVFPVADGDTGSNLASLMQAIIDNVAPKEYSTKELLEEVANAALIGARGN SGMIFAQYLTAVAESYHHLESTFEGLVQAFQKAVHKAYDALLDPKEGTILSVMKAWSEALAGSYEQERSFPQSLLNAQVV AEKALINTEFQMPILRKNRLVDSGAKGFYYFIAGLTNAYCGEAVSIPVSFSEKKDIIQPSHFETNEPLYRYCSEFIIKQA SISQQTLREVLASKGDSLVIAGNEKQIKIHIHTNEPQEVLRLLSAYGVMTYQKVDDMKLQYEVTKAPRAKIAIVTDSIAD LPEKFLLDHQVHVLPMNILAGEESFLDKLTVGPAMMKEKLEQQWKMSTAQPTIRSVDALLSFLENKYEHVLVITVASKLS GTYQLVKQRIQGRNLSSKWIQVIDSRLNSVAEGLLVKQAVELIEIGESFEKVTQKVKQLIESSFIYVAVADLSPMVQSGR IPRVLGKIAQKLSLHPIVSLDESGNGKLIGVSFSQKQSMKKIIKKVTKLQLKELAVTHVCSINDAKLWQKQLEKETGRNS YLVDSSAAIAISAGLGSVAVAGIKEEETI >Mature_589_residues MMESESRRLLQSMLNGAAEVISKKDELNRINVFPVADGDTGSNLASLMQAIIDNVAPKEYSTKELLEEVANAALIGARGN SGMIFAQYLTAVAESYHHLESTFEGLVQAFQKAVHKAYDALLDPKEGTILSVMKAWSEALAGSYEQERSFPQSLLNAQVV AEKALINTEFQMPILRKNRLVDSGAKGFYYFIAGLTNAYCGEAVSIPVSFSEKKDIIQPSHFETNEPLYRYCSEFIIKQA SISQQTLREVLASKGDSLVIAGNEKQIKIHIHTNEPQEVLRLLSAYGVMTYQKVDDMKLQYEVTKAPRAKIAIVTDSIAD LPEKFLLDHQVHVLPMNILAGEESFLDKLTVGPAMMKEKLEQQWKMSTAQPTIRSVDALLSFLENKYEHVLVITVASKLS GTYQLVKQRIQGRNLSSKWIQVIDSRLNSVAEGLLVKQAVELIEIGESFEKVTQKVKQLIESSFIYVAVADLSPMVQSGR IPRVLGKIAQKLSLHPIVSLDESGNGKLIGVSFSQKQSMKKIIKKVTKLQLKELAVTHVCSINDAKLWQKQLEKETGRNS YLVDSSAAIAISAGLGSVAVAGIKEEETI
Specific function: Unknown
COG id: COG1461
COG function: function code R; Predicted kinase related to dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaL domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004007 - InterPro: IPR019986 [H]
Pfam domain/function: PF02734 Dak2 [H]
EC number: NA
Molecular weight: Translated: 65137; Mature: 65137
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMESESRRLLQSMLNGAAEVISKKDELNRINVFPVADGDTGSNLASLMQAIIDNVAPKEY CCCCHHHHHHHHHHHHHHHHHHCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCC STKELLEEVANAALIGARGNSGMIFAQYLTAVAESYHHLESTFEGLVQAFQKAVHKAYDA CHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDPKEGTILSVMKAWSEALAGSYEQERSFPQSLLNAQVVAEKALINTEFQMPILRKNRL HCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCC VDSGAKGFYYFIAGLTNAYCGEAVSIPVSFSEKKDIIQPSHFETNEPLYRYCSEFIIKQA CCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH SISQQTLREVLASKGDSLVIAGNEKQIKIHIHTNEPQEVLRLLSAYGVMTYQKVDDMKLQ CCCHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHHCCHHHHHHCCCEEE YEVTKAPRAKIAIVTDSIADLPEKFLLDHQVHVLPMNILAGEESFLDKLTVGPAMMKEKL EEECCCCCCEEEEEECCHHHCHHHHHHCCCEEEEEHHHHCCCHHHHHHHHCCHHHHHHHH EQQWKMSTAQPTIRSVDALLSFLENKYEHVLVITVASKLSGTYQLVKQRIQGRNLSSKWI HHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCHHHHHHHHHHCCCCCHHHHH QVIDSRLNSVAEGLLVKQAVELIEIGESFEKVTQKVKQLIESSFIYVAVADLSPMVQSGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCC IPRVLGKIAQKLSLHPIVSLDESGNGKLIGVSFSQKQSMKKIIKKVTKLQLKELAVTHVC CHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC SINDAKLWQKQLEKETGRNSYLVDSSAAIAISAGLGSVAVAGIKEEETI CCCHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCHHHEECCCCCCCC >Mature Secondary Structure MMESESRRLLQSMLNGAAEVISKKDELNRINVFPVADGDTGSNLASLMQAIIDNVAPKEY CCCCHHHHHHHHHHHHHHHHHHCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCC STKELLEEVANAALIGARGNSGMIFAQYLTAVAESYHHLESTFEGLVQAFQKAVHKAYDA CHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLDPKEGTILSVMKAWSEALAGSYEQERSFPQSLLNAQVVAEKALINTEFQMPILRKNRL HCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCC VDSGAKGFYYFIAGLTNAYCGEAVSIPVSFSEKKDIIQPSHFETNEPLYRYCSEFIIKQA CCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH SISQQTLREVLASKGDSLVIAGNEKQIKIHIHTNEPQEVLRLLSAYGVMTYQKVDDMKLQ CCCHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCHHHHHHHHHHHCCHHHHHHCCCEEE YEVTKAPRAKIAIVTDSIADLPEKFLLDHQVHVLPMNILAGEESFLDKLTVGPAMMKEKL EEECCCCCCEEEEEECCHHHCHHHHHHCCCEEEEEHHHHCCCHHHHHHHHCCHHHHHHHH EQQWKMSTAQPTIRSVDALLSFLENKYEHVLVITVASKLSGTYQLVKQRIQGRNLSSKWI HHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCHHHHHHHHHHCCCCCHHHHH QVIDSRLNSVAEGLLVKQAVELIEIGESFEKVTQKVKQLIESSFIYVAVADLSPMVQSGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCC IPRVLGKIAQKLSLHPIVSLDESGNGKLIGVSFSQKQSMKKIIKKVTKLQLKELAVTHVC CHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC SINDAKLWQKQLEKETGRNSYLVDSSAAIAISAGLGSVAVAGIKEEETI CCCHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCHHHEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA