| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871978
Identifier: 116871978
GI number: 116871978
Start: 597827
End: 598600
Strand: Direct
Name: 116871978
Synonym: lwe0558
Alternate gene names: NA
Gene position: 597827-598600 (Clockwise)
Preceding gene: 116871977
Following gene: 116871979
Centisome position: 21.24
GC content: 33.46
Gene sequence:
>774_bases ATGATGTACTGGATAGTAGCTCTTGCTTTACTTGTTTATTTTGTACTCTGGTTTATTATTTCAAAAGTGAAAGGTAAGTA TTCCTTAGTAGATATTGCTTGGGGCGGAGGATTCGTCGTGGTTGCATGGACAGGTTTTTTAACTACGTTTAGTATCACTG CCCAAAGTATCACCATTCTTATTTTAGTCACTTTGTGGGGTGTACGTTTATTTTGGCATCTAGCTCGTAGAAATTGGAAT AAGCCTGAAGATTATCGTTATGTAAATATGCGCAAACGATGGGGAACCACATTAGTTAATTTAAAGGCCTTTTTAAATGT ATTTGTATTACAAGGGGTATTATTGTTTATTATTGCTTTACCAATTACACATACTTTTGCTAATGAAAGTGTAGACTTTG CATGGTGGCAAATCCTTGGAATTATTCTCTGGATTATTGGTTTCATTTTTGAAGTTGGTGGCGATCGTCAACTCGAAAAC TTCAAAAAAAATCCAGCTAATAAAGGAAAATTACTGACAACCGGTTTTTGGTCAGCTACAAGACATCCAAATTATTTTGG AGAAGCGCTTAGTTGGTGGGGTGTATTTTTAGTTGCATTAACGCAAATGACAGATATTTGGTTAATTATTAGTCCTGTAG TAATCACATTATTGCTATTGTTTGTTTCAGGAGTTCCTTTACTTGAAAAAAAATATCAAGATAGAGAAGACTTTAAAGCT TATGCAAATAAAACATCTAAATTTTTCCCGTTTTTAGGAAAAAAAGGTTTATAA
Upstream 100 bases:
>100_bases CAGGTCGAAATAGCTATCTTGTAGATAGTTCGGCTGCAATTGCGATTAGCGCCGGACTGGGAAGTGTCGCAGTCGCTGGC ATTAAAGAGGAGGAAACAAT
Downstream 100 bases:
>100_bases AATAGTACTTACATTTCAATAATGTTATTAATTGCTATTTGCCTTCTAAAACGAGTAAAATAAGCAATAGGCATGATAAA ACATTCCTAAGTACAATACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MMYWIVALALLVYFVLWFIISKVKGKYSLVDIAWGGGFVVVAWTGFLTTFSITAQSITILILVTLWGVRLFWHLARRNWN KPEDYRYVNMRKRWGTTLVNLKAFLNVFVLQGVLLFIIALPITHTFANESVDFAWWQILGIILWIIGFIFEVGGDRQLEN FKKNPANKGKLLTTGFWSATRHPNYFGEALSWWGVFLVALTQMTDIWLIISPVVITLLLLFVSGVPLLEKKYQDREDFKA YANKTSKFFPFLGKKGL
Sequences:
>Translated_257_residues MMYWIVALALLVYFVLWFIISKVKGKYSLVDIAWGGGFVVVAWTGFLTTFSITAQSITILILVTLWGVRLFWHLARRNWN KPEDYRYVNMRKRWGTTLVNLKAFLNVFVLQGVLLFIIALPITHTFANESVDFAWWQILGIILWIIGFIFEVGGDRQLEN FKKNPANKGKLLTTGFWSATRHPNYFGEALSWWGVFLVALTQMTDIWLIISPVVITLLLLFVSGVPLLEKKYQDREDFKA YANKTSKFFPFLGKKGL >Mature_257_residues MMYWIVALALLVYFVLWFIISKVKGKYSLVDIAWGGGFVVVAWTGFLTTFSITAQSITILILVTLWGVRLFWHLARRNWN KPEDYRYVNMRKRWGTTLVNLKAFLNVFVLQGVLLFIIALPITHTFANESVDFAWWQILGIILWIIGFIFEVGGDRQLEN FKKNPANKGKLLTTGFWSATRHPNYFGEALSWWGVFLVALTQMTDIWLIISPVVITLLLLFVSGVPLLEKKYQDREDFKA YANKTSKFFPFLGKKGL
Specific function: Unknown
COG id: COG3752
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI281365853, Length=254, Percent_Identity=28.740157480315, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI28574404, Length=254, Percent_Identity=28.740157480315, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI21355723, Length=254, Percent_Identity=28.740157480315, Blast_Score=122, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29717; Mature: 29717
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: PS50244 S5A_REDUCTASE ; PS00436 PEROXIDASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMYWIVALALLVYFVLWFIISKVKGKYSLVDIAWGGGFVVVAWTGFLTTFSITAQSITIL CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHH ILVTLWGVRLFWHLARRNWNKPEDYRYVNMRKRWGTTLVNLKAFLNVFVLQGVLLFIIAL HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH PITHTFANESVDFAWWQILGIILWIIGFIFEVGGDRQLENFKKNPANKGKLLTTGFWSAT HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEECCCCCC RHPNYFGEALSWWGVFLVALTQMTDIWLIISPVVITLLLLFVSGVPLLEKKYQDREDFKA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHH YANKTSKFFPFLGKKGL HHCCCHHHHCCCCCCCC >Mature Secondary Structure MMYWIVALALLVYFVLWFIISKVKGKYSLVDIAWGGGFVVVAWTGFLTTFSITAQSITIL CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHH ILVTLWGVRLFWHLARRNWNKPEDYRYVNMRKRWGTTLVNLKAFLNVFVLQGVLLFIIAL HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH PITHTFANESVDFAWWQILGIILWIIGFIFEVGGDRQLENFKKNPANKGKLLTTGFWSAT HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEECCCCCC RHPNYFGEALSWWGVFLVALTQMTDIWLIISPVVITLLLLFVSGVPLLEKKYQDREDFKA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHH YANKTSKFFPFLGKKGL HHCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA