| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
Click here to switch to the map view.
The map label for this gene is 116871973
Identifier: 116871973
GI number: 116871973
Start: 590473
End: 591498
Strand: Direct
Name: 116871973
Synonym: lwe0553
Alternate gene names: NA
Gene position: 590473-591498 (Clockwise)
Preceding gene: 116871972
Following gene: 116871974
Centisome position: 20.98
GC content: 32.46
Gene sequence:
>1026_bases TTGAAAAAAAGTTTTCTTAGTGTATTGTTCGGGGTTTCTTTTTTAGTTATTTTCTGCGGTATTACAGAAGCAAAAGCGGC AGAAGGAGACGTAGGCTTTTCTGTTCAAGCTAATATTCCCGCGAATCAAGTGGATAAAAAACAAACTTACTTTGATTTAA AAATGAAGCCTAAACAAAAACAAACTGTAGAAATTGAGGTAATGAATAGCTCAAATGAAGAAATCCAAGTTGAAGCATCA GTTAACTATGCGTCAACTAACCAAACGGGAGTTATCGATTATACTAAAAATGATTTGACGAAAAAAGACAAAAGTCTCAA ATATCCTTTACCAAGCATTGCTAAAATACCGGACGATCAAAAACACCTAACGATACCAATTAACGGTAAAAAAACAGTAA AAGTTACGATTGAAATGCCAAGTGAATCAGTAGATGGCGTGATACTTGGTGCTGTGCAATTTAAAAAGAAAAATACAACA GAAAATAAACAAACAAAAGGTATCTCTCTTAAAAATGAATATTCCTATATTGTTGGTATGCAATTAACTGAAACCGACAA ACAAGTTACCCCGCATATGAACTTATTAAGTGTCAAACCAGCACTCGTTAATTACCACACCACAGTAGTTGCTAAATTAC AAAATGATCAACCTGTCATTATTAAAAATTTAAGCATTGATGCGAAAGTTTATCAACAAAATTCGGATAAAATGCTTTAC CAAACGAAAAAAGCAGATATGATAGTGGCTCCAAATTCAAATTTTAATTTTGGTATTGATTGGAAAAACAAACCACTAAA AGAAGGAAAATATCGTTTAAAAATGACTGCGACGAATGGCGTCGAGACATGGGAATGGGATGAAGCATTCACGATAGGTA AAGAAGGTCAAGATTTAAATAAAGACGCAGTAAATTTAAAACAAAATAACGGTTGGTTGTATGTGGCGATTGCTGCAGGA GCTTTCCTTATAGTATTAATTATTATTTTAGTCATTAGAAAACGAAGAAAAAACAAAGAAAAATAA
Upstream 100 bases:
>100_bases ATTACATGGACATTATCTGACGCGCCTGGAGTTTAAAAAATTTGCGTTTAGAAAGTTTATTTCTAAACGCAAAATTTTTA TTAAAGAAAGGAAGGTTTAA
Downstream 100 bases:
>100_bases AGAAAGGAGCTAGCACATTGGCCTTTAAAAAAATAATACTTATATTGACCATGGTAGCTCTTTTTCTAAGTGTTAAAATA GTTGCCCAAGCAGAAACTGG
Product: putative secreted protein
Products: NA
Alternate protein names: C-Terminal Membrane Anchored Cell Surface Protein; Cell Wall Surface Anchor Family Protein; Secreted Protein
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MKKSFLSVLFGVSFLVIFCGITEAKAAEGDVGFSVQANIPANQVDKKQTYFDLKMKPKQKQTVEIEVMNSSNEEIQVEAS VNYASTNQTGVIDYTKNDLTKKDKSLKYPLPSIAKIPDDQKHLTIPINGKKTVKVTIEMPSESVDGVILGAVQFKKKNTT ENKQTKGISLKNEYSYIVGMQLTETDKQVTPHMNLLSVKPALVNYHTTVVAKLQNDQPVIIKNLSIDAKVYQQNSDKMLY QTKKADMIVAPNSNFNFGIDWKNKPLKEGKYRLKMTATNGVETWEWDEAFTIGKEGQDLNKDAVNLKQNNGWLYVAIAAG AFLIVLIIILVIRKRRKNKEK
Sequences:
>Translated_341_residues MKKSFLSVLFGVSFLVIFCGITEAKAAEGDVGFSVQANIPANQVDKKQTYFDLKMKPKQKQTVEIEVMNSSNEEIQVEAS VNYASTNQTGVIDYTKNDLTKKDKSLKYPLPSIAKIPDDQKHLTIPINGKKTVKVTIEMPSESVDGVILGAVQFKKKNTT ENKQTKGISLKNEYSYIVGMQLTETDKQVTPHMNLLSVKPALVNYHTTVVAKLQNDQPVIIKNLSIDAKVYQQNSDKMLY QTKKADMIVAPNSNFNFGIDWKNKPLKEGKYRLKMTATNGVETWEWDEAFTIGKEGQDLNKDAVNLKQNNGWLYVAIAAG AFLIVLIIILVIRKRRKNKEK >Mature_341_residues MKKSFLSVLFGVSFLVIFCGITEAKAAEGDVGFSVQANIPANQVDKKQTYFDLKMKPKQKQTVEIEVMNSSNEEIQVEAS VNYASTNQTGVIDYTKNDLTKKDKSLKYPLPSIAKIPDDQKHLTIPINGKKTVKVTIEMPSESVDGVILGAVQFKKKNTT ENKQTKGISLKNEYSYIVGMQLTETDKQVTPHMNLLSVKPALVNYHTTVVAKLQNDQPVIIKNLSIDAKVYQQNSDKMLY QTKKADMIVAPNSNFNFGIDWKNKPLKEGKYRLKMTATNGVETWEWDEAFTIGKEGQDLNKDAVNLKQNNGWLYVAIAAG AFLIVLIIILVIRKRRKNKEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38328; Mature: 38328
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSFLSVLFGVSFLVIFCGITEAKAAEGDVGFSVQANIPANQVDKKQTYFDLKMKPKQK CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHCCCCCEEEEEEECCCCC QTVEIEVMNSSNEEIQVEASVNYASTNQTGVIDYTKNDLTKKDKSLKYPLPSIAKIPDDQ CEEEEEEECCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCC KHLTIPINGKKTVKVTIEMPSESVDGVILGAVQFKKKNTTENKQTKGISLKNEYSYIVGM CEEEEEECCCEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCHHCCCEECCCCEEEEEE QLTETDKQVTPHMNLLSVKPALVNYHTTVVAKLQNDQPVIIKNLSIDAKVYQQNSDKMLY EEECCCCCCCCCCEEEEECHHHEEEEEEEEEEECCCCCEEEEECCCCEEEEECCCCCEEE QTKKADMIVAPNSNFNFGIDWKNKPLKEGKYRLKMTATNGVETWEWDEAFTIGKEGQDLN EECCCCEEEECCCCCEEEECCCCCCCCCCCEEEEEEECCCCCEEECCCEEEECCCCCCCC KDAVNLKQNNGWLYVAIAAGAFLIVLIIILVIRKRRKNKEK CCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKSFLSVLFGVSFLVIFCGITEAKAAEGDVGFSVQANIPANQVDKKQTYFDLKMKPKQK CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHCCCCCEEEEEEECCCCC QTVEIEVMNSSNEEIQVEASVNYASTNQTGVIDYTKNDLTKKDKSLKYPLPSIAKIPDDQ CEEEEEEECCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCC KHLTIPINGKKTVKVTIEMPSESVDGVILGAVQFKKKNTTENKQTKGISLKNEYSYIVGM CEEEEEECCCEEEEEEEECCCCCCCEEEEEEEEEECCCCCCCCHHCCCEECCCCEEEEEE QLTETDKQVTPHMNLLSVKPALVNYHTTVVAKLQNDQPVIIKNLSIDAKVYQQNSDKMLY EEECCCCCCCCCCEEEEECHHHEEEEEEEEEEECCCCCEEEEECCCCEEEEECCCCCEEE QTKKADMIVAPNSNFNFGIDWKNKPLKEGKYRLKMTATNGVETWEWDEAFTIGKEGQDLN EECCCCEEEECCCCCEEEECCCCCCCCCCCEEEEEEECCCCCEEECCCEEEECCCCCCCC KDAVNLKQNNGWLYVAIAAGAFLIVLIIILVIRKRRKNKEK CCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA