| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116871974
Identifier: 116871974
GI number: 116871974
Start: 591516
End: 593981
Strand: Direct
Name: 116871974
Synonym: lwe0554
Alternate gene names: NA
Gene position: 591516-593981 (Clockwise)
Preceding gene: 116871973
Following gene: 116871975
Centisome position: 21.02
GC content: 36.54
Gene sequence:
>2466_bases TTGGCCTTTAAAAAAATAATACTTATATTGACCATGGTAGCTCTTTTTCTAAGTGTTAAAATAGTTGCCCAAGCAGAAAC TGGAAATGTTAATTTAGAATCAAATGAAGCAGTAGTAACCAACTTTGCAGAATTAAAACAAGCAATTTCCGAAAATAATG GAATTGATACAGTTTATTTAGGCGCGGATGTTGAGTTGTCAGGAGGAATAATAATACCAGATTCCAAGAAAACTTTTACC TTATCTGGGAAGGATCCTGCAACAGGTGTCATTCACACATTAACAGAAACAATGGCCTCATCTGGTGCGCAAAGTAGTGT TATCACTGTAAATACAAATACTGGCGCAAAAGAAACAACACTCAAAGATTTAAATATTATCGGAAAAAATTATTATGGTA CGATTTCCGTTTATGGCGCTGCAAAAAATGTGGTACAAAACTATGAAAATATCCGTTATCAAGGTCCGCAAATGATTTAT AATTTGAATGGAACAGCCAATTTTAAAGGGACAAATGATGTAAGGATTGCATCTGTAGTGACTGGTTCTGCAACACCAAA TGAAGTAGCCGAAATCAAAGGTGTGAATGTGTCTGGAAAGCTGAATATCGACCATGCAAGTCCTAATGCAAATAGTACTT TTTGGTTTGGTAGCGGGACTTCTGAAGTGAACACTTTTACAGTAGAAGAAGGGGCAGATGTTAGTGTCAATTCTAATGGG ACAGGGATGTTTTATCGTTCAGGCGTAAAACCAATAGATATTGATGTAAAAAAGAATGCAAAACTAACTATTACATCTAA CAATAATATTTTTCGAGATAACCCAGGTGGTGCAGTTAAAATTGCTGAAGGTGCAGATGTGACAATGACAAAAACAGCCG GTGGAAATCCGCTTCTTTGGTCCGCAGATGATATTACCGTCAGTCCCAATGCTCGTTTAATTTTGAATAAAACAGGTGGA ACTGGCTATGTTATTCAATTTTATAATGGAACTGCGAAGTTAGAGGTTCAAGATCCGCTAAGTTTTTTAGTTGCAACGAA TACGAATACACCAATGTTTTATTGGCCTTATGCGAATACATTTAATTTAGAGGCGCAATTGGTGAATTACTGGGATACAA CTGGAGCATTTGATCGGACAGATGCACCGGCACAAATTTTTAGTTTGCCAACTGGAGAAAATGTTACTGGGAGTTTAACG TATACTGGAACAACGACAAAGATTCTGGCTACTAATGCAGGAATGACTCCAACTAATTTTAATCAAAATACAGCGCGTAT GATTGCGATGGGGCGTCTTGAGGGAACGATTAATCCGGTGACAGATGCAGATAGTGAAATTACAGGGACAGCGACTCCAA ATGCTTTTATTACGATTACGTATACAGAAAATGGTGAAAACAAGCTCTTAAATGGGCAAGCAGATGGTACTGGTGTTTAT CGAATTGCTATCCCAGACGGTTTTATTAAACCCTATACTGATCTAGCCACAACGATTACACAAGATCAAAAACGGATTAT ATTAGATTCTGTAAATGTAAAAGACGTGACTCCTCCACGGGGAGATGCTATCCCGCAAGTATTAAATATAGGGGATTCAA TCCCAGATGCATATAAATTAGTTACAAACATTACTGATCACTCAGATGGAACGGCGGGTGAAGGAGTCACTATAACTATT CTGAATGAACCAGATACAAATGTTTTTGGTCCAGCAGAAGCAATTGTTCGTTTAGAAGACAAAGCACATAACTACGCTGA CATCCGCGTACCGGTTTTTATCAAAGATGATATGACTGAAATACAAAATGATATAGCGCTACGAGCAGAAGATTTTGCTG TAAATGTAAAAGACATCATAGATCTTAATGATACAGATTTACAACAATTAATTTTAAATAAATCAGGTGCAAAAGCTTAT AATACCGAAACTGGTGAAAACTTAACAACTCAAATTAAAGTAACTAGCACAACGCTCAAAAAAGAAACAGGAACTTATAC AGCTACTATCCAAATTGGAACTGTAACAAAAGAAATTACCATTCAAGTAACAGGAGAACTAAAATTCAATCATGTGCCAG AAACGATTTCTTTTGAAACAATAGAACTAAATAAACAAAAAAATATCGCTAAACGAAAGGAAGACTTTGATTTATCCATT CTTGATTCAAGAGGGGCAGATAATGGCTTCAGTGTAACAGTAACTGTTAAATCACCACTAACTTCAACGACAAATCCTTC TCATATTTTGTCAGATGGACTTATCTTTATTGATAGTAATGGCGAGAAAAGAGTGCTTTCATCAGAACCAACAACCGTTT TTCAATCGCAAGTTACTCAAGATATGATTGTTCCGGTAGAATGGGACACAAACCAAGGTATACTTATCGAAGCGGATGCA GCTGAAGCTTATAGCGATGAAAATTATGAAACAACAATTGAGTGGACTTTAACCGACGCTCCATAA
Upstream 100 bases:
>100_bases TGGCGATTGCTGCAGGAGCTTTCCTTATAGTATTAATTATTATTTTAGTCATTAGAAAACGAAGAAAAAACAAAGAAAAA TAAAGAAAGGAGCTAGCACA
Downstream 100 bases:
>100_bases AAAATCTGTTAGCGAAAAGTTAACAGATTTTTTTGTGTTATAAGCCCTTTGCTTTTATAAATTGCTAAGCGTTTCGTATA ATAAGCATAAGTAATTCGCG
Product: putative secreted protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 821; Mature: 820
Protein sequence:
>821_residues MAFKKIILILTMVALFLSVKIVAQAETGNVNLESNEAVVTNFAELKQAISENNGIDTVYLGADVELSGGIIIPDSKKTFT LSGKDPATGVIHTLTETMASSGAQSSVITVNTNTGAKETTLKDLNIIGKNYYGTISVYGAAKNVVQNYENIRYQGPQMIY NLNGTANFKGTNDVRIASVVTGSATPNEVAEIKGVNVSGKLNIDHASPNANSTFWFGSGTSEVNTFTVEEGADVSVNSNG TGMFYRSGVKPIDIDVKKNAKLTITSNNNIFRDNPGGAVKIAEGADVTMTKTAGGNPLLWSADDITVSPNARLILNKTGG TGYVIQFYNGTAKLEVQDPLSFLVATNTNTPMFYWPYANTFNLEAQLVNYWDTTGAFDRTDAPAQIFSLPTGENVTGSLT YTGTTTKILATNAGMTPTNFNQNTARMIAMGRLEGTINPVTDADSEITGTATPNAFITITYTENGENKLLNGQADGTGVY RIAIPDGFIKPYTDLATTITQDQKRIILDSVNVKDVTPPRGDAIPQVLNIGDSIPDAYKLVTNITDHSDGTAGEGVTITI LNEPDTNVFGPAEAIVRLEDKAHNYADIRVPVFIKDDMTEIQNDIALRAEDFAVNVKDIIDLNDTDLQQLILNKSGAKAY NTETGENLTTQIKVTSTTLKKETGTYTATIQIGTVTKEITIQVTGELKFNHVPETISFETIELNKQKNIAKRKEDFDLSI LDSRGADNGFSVTVTVKSPLTSTTNPSHILSDGLIFIDSNGEKRVLSSEPTTVFQSQVTQDMIVPVEWDTNQGILIEADA AEAYSDENYETTIEWTLTDAP
Sequences:
>Translated_821_residues MAFKKIILILTMVALFLSVKIVAQAETGNVNLESNEAVVTNFAELKQAISENNGIDTVYLGADVELSGGIIIPDSKKTFT LSGKDPATGVIHTLTETMASSGAQSSVITVNTNTGAKETTLKDLNIIGKNYYGTISVYGAAKNVVQNYENIRYQGPQMIY NLNGTANFKGTNDVRIASVVTGSATPNEVAEIKGVNVSGKLNIDHASPNANSTFWFGSGTSEVNTFTVEEGADVSVNSNG TGMFYRSGVKPIDIDVKKNAKLTITSNNNIFRDNPGGAVKIAEGADVTMTKTAGGNPLLWSADDITVSPNARLILNKTGG TGYVIQFYNGTAKLEVQDPLSFLVATNTNTPMFYWPYANTFNLEAQLVNYWDTTGAFDRTDAPAQIFSLPTGENVTGSLT YTGTTTKILATNAGMTPTNFNQNTARMIAMGRLEGTINPVTDADSEITGTATPNAFITITYTENGENKLLNGQADGTGVY RIAIPDGFIKPYTDLATTITQDQKRIILDSVNVKDVTPPRGDAIPQVLNIGDSIPDAYKLVTNITDHSDGTAGEGVTITI LNEPDTNVFGPAEAIVRLEDKAHNYADIRVPVFIKDDMTEIQNDIALRAEDFAVNVKDIIDLNDTDLQQLILNKSGAKAY NTETGENLTTQIKVTSTTLKKETGTYTATIQIGTVTKEITIQVTGELKFNHVPETISFETIELNKQKNIAKRKEDFDLSI LDSRGADNGFSVTVTVKSPLTSTTNPSHILSDGLIFIDSNGEKRVLSSEPTTVFQSQVTQDMIVPVEWDTNQGILIEADA AEAYSDENYETTIEWTLTDAP >Mature_820_residues AFKKIILILTMVALFLSVKIVAQAETGNVNLESNEAVVTNFAELKQAISENNGIDTVYLGADVELSGGIIIPDSKKTFTL SGKDPATGVIHTLTETMASSGAQSSVITVNTNTGAKETTLKDLNIIGKNYYGTISVYGAAKNVVQNYENIRYQGPQMIYN LNGTANFKGTNDVRIASVVTGSATPNEVAEIKGVNVSGKLNIDHASPNANSTFWFGSGTSEVNTFTVEEGADVSVNSNGT GMFYRSGVKPIDIDVKKNAKLTITSNNNIFRDNPGGAVKIAEGADVTMTKTAGGNPLLWSADDITVSPNARLILNKTGGT GYVIQFYNGTAKLEVQDPLSFLVATNTNTPMFYWPYANTFNLEAQLVNYWDTTGAFDRTDAPAQIFSLPTGENVTGSLTY TGTTTKILATNAGMTPTNFNQNTARMIAMGRLEGTINPVTDADSEITGTATPNAFITITYTENGENKLLNGQADGTGVYR IAIPDGFIKPYTDLATTITQDQKRIILDSVNVKDVTPPRGDAIPQVLNIGDSIPDAYKLVTNITDHSDGTAGEGVTITIL NEPDTNVFGPAEAIVRLEDKAHNYADIRVPVFIKDDMTEIQNDIALRAEDFAVNVKDIIDLNDTDLQQLILNKSGAKAYN TETGENLTTQIKVTSTTLKKETGTYTATIQIGTVTKEITIQVTGELKFNHVPETISFETIELNKQKNIAKRKEDFDLSIL DSRGADNGFSVTVTVKSPLTSTTNPSHILSDGLIFIDSNGEKRVLSSEPTTVFQSQVTQDMIVPVEWDTNQGILIEADAA EAYSDENYETTIEWTLTDAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88469; Mature: 88337
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFKKIILILTMVALFLSVKIVAQAETGNVNLESNEAVVTNFAELKQAISENNGIDTVYL CCHHHHHHHHHHHHHHHEEEEEEEECCCCEEECCCCEEEEEHHHHHHHHHCCCCCCEEEE GADVELSGGIIIPDSKKTFTLSGKDPATGVIHTLTETMASSGAQSSVITVNTNTGAKETT ECCEEECCCEEECCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEE LKDLNIIGKNYYGTISVYGAAKNVVQNYENIRYQGPQMIYNLNGTANFKGTNDVRIASVV EEEHEEECCCEEEEEEEECCHHHHHHHHHHCEECCCEEEEECCCEEECCCCCCEEEEEEE TGSATPNEVAEIKGVNVSGKLNIDHASPNANSTFWFGSGTSEVNTFTVEEGADVSVNSNG ECCCCCCCHHHEECCCCCEEEEEEECCCCCCCEEEECCCCCCEEEEEECCCCEEEECCCC TGMFYRSGVKPIDIDVKKNAKLTITSNNNIFRDNPGGAVKIAEGADVTMTKTAGGNPLLW CEEEEECCCCEEEEEECCCCEEEEECCCCEEEECCCCEEEEECCCCEEEEECCCCCEEEE SADDITVSPNARLILNKTGGTGYVIQFYNGTAKLEVQDPLSFLVATNTNTPMFYWPYANT ECCCEEECCCCEEEEECCCCCEEEEEEECCEEEEEECCCEEEEEEECCCCCEEECCCCCE FNLEAQLVNYWDTTGAFDRTDAPAQIFSLPTGENVTGSLTYTGTTTKILATNAGMTPTNF EEEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCEEEEEEECCCCCCCCC NQNTARMIAMGRLEGTINPVTDADSEITGTATPNAFITITYTENGENKLLNGQADGTGVY CCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEECCCCCCCEEE RIAIPDGFIKPYTDLATTITQDQKRIILDSVNVKDVTPPRGDAIPQVLNIGDSIPDAYKL EEECCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCHHHHH VTNITDHSDGTAGEGVTITILNEPDTNVFGPAEAIVRLEDKAHNYADIRVPVFIKDDMTE HHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHEEEEEECCCCCEEEEEEEEEECCCHHH IQNDIALRAEDFAVNVKDIIDLNDTDLQQLILNKSGAKAYNTETGENLTTQIKVTSTTLK HHHHHEEEEEEEEEEHHHEECCCCCHHHHHHHCCCCCCEECCCCCCCEEEEEEEEEEEEE KETGTYTATIQIGTVTKEITIQVTGELKFNHVPETISFETIELNKQKNIAKRKEDFDLSI CCCCCEEEEEEEEEEEEEEEEEEEEEEEECCCCCEEEEEEEEECCCCCHHHCCCCCCEEE LDSRGADNGFSVTVTVKSPLTSTTNPSHILSDGLIFIDSNGEKRVLSSEPTTVFQSQVTQ EECCCCCCCEEEEEEEECCCCCCCCCCHHHCCCEEEEECCCCEEEECCCCCHHHHHHCCC DMIVPVEWDTNQGILIEADAAEAYSDENYETTIEWTLTDAP CEEEEEEECCCCCEEEEECCCHHCCCCCCEEEEEEEECCCC >Mature Secondary Structure AFKKIILILTMVALFLSVKIVAQAETGNVNLESNEAVVTNFAELKQAISENNGIDTVYL CHHHHHHHHHHHHHHHEEEEEEEECCCCEEECCCCEEEEEHHHHHHHHHCCCCCCEEEE GADVELSGGIIIPDSKKTFTLSGKDPATGVIHTLTETMASSGAQSSVITVNTNTGAKETT ECCEEECCCEEECCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEE LKDLNIIGKNYYGTISVYGAAKNVVQNYENIRYQGPQMIYNLNGTANFKGTNDVRIASVV EEEHEEECCCEEEEEEEECCHHHHHHHHHHCEECCCEEEEECCCEEECCCCCCEEEEEEE TGSATPNEVAEIKGVNVSGKLNIDHASPNANSTFWFGSGTSEVNTFTVEEGADVSVNSNG ECCCCCCCHHHEECCCCCEEEEEEECCCCCCCEEEECCCCCCEEEEEECCCCEEEECCCC TGMFYRSGVKPIDIDVKKNAKLTITSNNNIFRDNPGGAVKIAEGADVTMTKTAGGNPLLW CEEEEECCCCEEEEEECCCCEEEEECCCCEEEECCCCEEEEECCCCEEEEECCCCCEEEE SADDITVSPNARLILNKTGGTGYVIQFYNGTAKLEVQDPLSFLVATNTNTPMFYWPYANT ECCCEEECCCCEEEEECCCCCEEEEEEECCEEEEEECCCEEEEEEECCCCCEEECCCCCE FNLEAQLVNYWDTTGAFDRTDAPAQIFSLPTGENVTGSLTYTGTTTKILATNAGMTPTNF EEEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCEEEEEEECCCCCCCCC NQNTARMIAMGRLEGTINPVTDADSEITGTATPNAFITITYTENGENKLLNGQADGTGVY CCCCEEEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCEEECCCCCCCEEE RIAIPDGFIKPYTDLATTITQDQKRIILDSVNVKDVTPPRGDAIPQVLNIGDSIPDAYKL EEECCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCHHHHH VTNITDHSDGTAGEGVTITILNEPDTNVFGPAEAIVRLEDKAHNYADIRVPVFIKDDMTE HHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHEEEEEECCCCCEEEEEEEEEECCCHHH IQNDIALRAEDFAVNVKDIIDLNDTDLQQLILNKSGAKAYNTETGENLTTQIKVTSTTLK HHHHHEEEEEEEEEEHHHEECCCCCHHHHHHHCCCCCCEECCCCCCCEEEEEEEEEEEEE KETGTYTATIQIGTVTKEITIQVTGELKFNHVPETISFETIELNKQKNIAKRKEDFDLSI CCCCCEEEEEEEEEEEEEEEEEEEEEEEECCCCCEEEEEEEEECCCCCHHHCCCCCCEEE LDSRGADNGFSVTVTVKSPLTSTTNPSHILSDGLIFIDSNGEKRVLSSEPTTVFQSQVTQ EECCCCCCCEEEEEEEECCCCCCCCCCHHHCCCEEEEECCCCEEEECCCCCHHHHHHCCC DMIVPVEWDTNQGILIEADAAEAYSDENYETTIEWTLTDAP CEEEEEEECCCCCEEEEECCCHHCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA